| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_017635 | 2,322,414 | A→G | V93V (GTT→GTC) | ECW_RS11650 ← | head completion/stabilization protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_017635 | 2,322,414 | 0 | A | G | 100.0% | 10.9 / NA | 9 | V93V (GTT→GTC) | ECW_RS11650 | head completion/stabilization protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/3); total (6/3) | |||||||||||
GTAAAAAACTTTGATGCTTTCACCGTCGATGCCGTCCGCCGGAACGTCCGCCAGACGCGAAAAACCGGCAGCAATTTTCTGTTCGCGG > NC_017635/2322372‑2322459 | gtaAAAAACTTTGATGCTTTCACCGTCGATGCCGTCCGCCGGGACGTcag > 1:480942/1‑48 (MQ=11) aaaaCTTTGATGCTTTCACCGTCGATGCCGTCCGCCGGGACGTCAGCCAg < 1:1638666/50‑1 (MQ=11) aaaCTTTGATGCTTTCACCGTCGATGCCGTCCGCCGGGACGTCAGCCAGa > 1:1129002/1‑50 (MQ=11) aaaCTTTGATGCTTTCACCGTCGATGCCGTCCGCCGGGACGTCAGCCAGa > 1:54801/1‑50 (MQ=11) cGTCGATGCCGTCCGCCGGGACGTCAGCCAGACGCGAAAAACCGgcagc > 2:393141/1‑49 (MQ=17) aTGCCGTCCGCCGGGACGTCAGCCAGACGCGAAAAACCGGCAGCAAtttt > 1:1696912/1‑50 (MQ=17) ccgGGACGTCAGCCAGACGCGAAAAACCGGCAGCAATTTTCTGTTCGCgg < 1:1598699/50‑1 (MQ=14) ccgGGACGTCAGCCAGACGCGAAAAACCGGCAGCAATTTTCTGTTCGCgg < 2:1281420/50‑1 (MQ=14) cgGGACGTCAGCCAGACGCGAAAAACCGGCAGCAATTTTCTGTTCGCgg > 2:1382858/1‑49 (MQ=14) | GTAAAAAACTTTGATGCTTTCACCGTCGATGCCGTCCGCCGGAACGTCCGCCAGACGCGAAAAACCGGCAGCAATTTTCTGTTCGCGG > NC_017635/2322372‑2322459 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |