Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_017635 | 4,336,992 | C→T | I492I (ATC→ATT) | ECW_RS21660 → | replication endonuclease |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_017635 | 4,336,992 | 0 | C | T | 100.0% | 37.4 / NA | 12 | I492I (ATC→ATT) | ECW_RS21660 | replication endonuclease |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (7/5); total (7/5) |
ACACTGCAGCGGCTGTTACCGCATGGGCGTCTACGTGGCGCATCCCGCAATTTAAAACGGTTGGCCTGCCGACAAT > NC_017635/4336949‑4337024 | acacTGCAGCGGCTGTTACCGCATGGGCGTCTACGTGGCGCATTCCGCaa < 2:148561/50‑1 (MQ=255) cacTGCAGCGGCTGTTACCGCATGGGCGTCTACGTGGCGCATTCCGCAAt > 1:1092672/1‑50 (MQ=255) acTGCAGCGGCTGTTACCGCATGGGCGTCTACGTGGCGCATTCCGCAAtt > 2:1158557/1‑50 (MQ=255) cTGCAGCGGCTGTTACCGCATGGGCGTCTACGTGGCGCATTCCGCAAttt < 2:505534/50‑1 (MQ=255) cAGCGGCTGTTACCGCATGGGCGTCTACGTGGCGCATTCCGCAATTTaa > 1:826138/1‑49 (MQ=255) tACCGCATGGGCGTCTACGTGGCGCATTCCGCAATTTAAAACGGTTGGcc > 2:1955758/1‑50 (MQ=255) aCCGCATGGGCGTCTACGTGGCGCATTCCGCAATTTAAAACGGTTGGcc < 1:328664/49‑1 (MQ=255) gCATGGGCGTCTACGTGGCGCATTCCGCAATTTAAAACGGTTGGCCTGcc > 2:1574604/1‑50 (MQ=255) gCATGGGCGTCTACGTGGCGCATTCCGCAATTTAAAACGGTTGGCCTGcc > 2:906131/1‑50 (MQ=255) tGGGCGTCTACGTGGCGCATTCCGCAATTTAAAACGGTTGGCCTGCCGa > 1:1113396/1‑49 (MQ=255) ggCGTCTACGTGGCGCATTCCGCAATTTAAAACGGTTGGCCTGCCGACaa < 1:1332534/50‑1 (MQ=255) gCGTCTACGTGGCGCATTCCGCAATTTAAAACGGTTGGCCTGCCGACAAt < 2:999847/50‑1 (MQ=255) | ACACTGCAGCGGCTGTTACCGCATGGGCGTCTACGTGGCGCATCCCGCAATTTAAAACGGTTGGCCTGCCGACAAT > NC_017635/4336949‑4337024 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |