| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_017635 | 1,363,044 | G→C | intergenic (‑277/+152) | ECW_RS27505 ← / ← ECW_RS06715 | type I toxin‑antitoxin system toxin Ldr family protein/type I toxin‑antitoxin system toxin Ldr family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_017635 | 1,363,044 | 0 | G | C | 100.0% | 111.9 / NA | 29 | intergenic (‑277/+152) | ECW_RS27505/ECW_RS06715 | type I toxin‑antitoxin system toxin Ldr family protein/type I toxin‑antitoxin system toxin Ldr family protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (11/18); total (11/18) | |||||||||||
AGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTGGTTTCATGAGTACTCTGGATGATGCTTCCAGCTCGGGTTGCCAATA > NC_017635/1363009‑1363090 | agagTGCATTCCGGTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTAct < 1:1542351/50‑1 (MQ=12) agTGCATTCCGGTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTActct > 2:800792/1‑50 (MQ=255) gTGCATTCCGGTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTACTCTg < 2:679984/50‑1 (MQ=255) gTGCATTCCGGTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTACTCTg > 1:537467/1‑50 (MQ=255) ccGGTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGgatgat < 2:1644079/49‑1 (MQ=255) ccGGTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGgatgat < 2:1905498/49‑1 (MQ=255) ccGGTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGgatgat < 2:219376/49‑1 (MQ=255) ccGGTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGatgatg > 1:900446/1‑50 (MQ=255) cGGTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGatgatg < 2:375260/49‑1 (MQ=255) cGGTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGc > 2:632540/1‑50 (MQ=255) ggTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCt > 1:1658392/1‑50 (MQ=255) ggTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCt > 2:1977487/1‑50 (MQ=255) gTTTTTCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCtt < 1:475091/50‑1 (MQ=255) tttttCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTc < 1:1652430/50‑1 (MQ=255) tttttCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTc > 1:932119/1‑50 (MQ=255) ttCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCa < 2:335966/49‑1 (MQ=255) ttCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCa < 1:1105379/49‑1 (MQ=255) ttCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCa < 1:1607962/49‑1 (MQ=255) ttCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCAg > 2:602149/1‑50 (MQ=255) tCAACAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCAg < 1:1114405/49‑1 (MQ=255) aaCAGCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCAGCTc < 1:1966596/50‑1 (MQ=255) gCTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCAGCTCGGGt > 2:1332664/1‑50 (MQ=255) cTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCAGCTCGGGtt < 1:104465/50‑1 (MQ=255) cTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCAGCTCGGGtt < 1:2002763/50‑1 (MQ=255) cTGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCAGCTCGGGtt < 2:338340/50‑1 (MQ=255) tGTTACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCAGCTCGGGTTg > 2:291682/1‑50 (MQ=255) ttACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCAGCTCGGGTTg < 1:620/48‑1 (MQ=255) ttACAGTCGTTTCATGAGTACTCTGGATGATGCTTCCAGCTCGGGTTGcc < 1:989270/50‑1 (MQ=255) aGTCGTTTCATGAGTACTCTGGATGATGCTTCCAGCTCGGGTTGCCAata > 2:942407/1‑50 (MQ=255) | AGAGTGCATTCCGGTTTTTCAACAGCTGTTACAGTGGTTTCATGAGTACTCTGGATGATGCTTCCAGCTCGGGTTGCCAATA > NC_017635/1363009‑1363090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |