| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_017635 | 4,350,170 | T→G | L93L (CTT→CTG) | lysB → | Rz‑like lysis system protein LysB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_017635 | 4,350,170 | 0 | T | G | 100.0% | 19.2 / NA | 6 | L93L (CTT→CTG) | lysB | Rz‑like lysis system protein LysB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (2/4); total (2/4) | |||||||||||
TCACGAGGTTACTTAATGAAAACGAAGATTTTCGCCGCTGGTATGGTGCTGGCCTGCCT > NC_017635/4350157‑4350215 | tCACGAGGTTACTGAATGAAAACGAAGATTTTCGCCGCTGGTATGGTGCt < 2:1216249/50‑1 (MQ=255) aCGAGGTTACTGAATGAAAACGAAGATTTTCGCCGCTGGTATGGTGCTgg < 1:901097/50‑1 (MQ=255) gAGGTTACTGAATGAAAACGAAGATTTTCGCCGCTGGTATGGTGCTGgcc > 2:500875/1‑50 (MQ=255) ggTTACTGAATGAAAACGAAGATTTTCGCCGCTGGTATGGTGCTGgcctg < 1:1863151/50‑1 (MQ=255) ttACTGAATGAAAACGAAGATTTTCGCCGCTGGTATGGTGCTGgcctgcc > 1:108869/1‑50 (MQ=255) aCTGAATGAAAACGAAGATTTTCGCCGCTGGTATGGTGCTGgcctgcct < 1:942812/49‑1 (MQ=255) | TCACGAGGTTACTTAATGAAAACGAAGATTTTCGCCGCTGGTATGGTGCTGGCCTGCCT > NC_017635/4350157‑4350215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |