New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_009004 1615066 =29 (0.040)9792 (14.510) 292/294 0.0 99.7% coding (213/1278 nt) LLMG_RS08245 citrate:cation symporter
?NC_009004 1646630 = NA (NA)intergenic (‑104/‑89) LLMG_RS08410/LLMG_RS08415 GTP pyrophosphokinase family protein/IS256‑like element IS905 family transposase

Only 100 of 544 total aligned reads displayed.

AACTCTTCTGGCTCGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAGATATTG  >  NC_009004/1646483‑1646773
                                                                                                                                                   |                                                                                                                                               
 aCTCTTCTGGCTCGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAgg                                                                                                                                                >  1:3035021/1‑148 (MQ=255)
 aCTCTTCTGGCTCGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAgg                                                                                                                                                <  1:483507/148‑1 (MQ=255)
   tcttctGGCTCGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTa                                                                                                                                              <  1:4386840/148‑1 (MQ=255)
    cttctGGCTCGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAg                                                                                                                                             >  1:10166336/1‑148 (MQ=255)
     ttctGGGTCGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAgt                                                                                                                                            <  1:5515389/148‑1 (MQ=255)
        tGGCTCGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTa                                                                                                                                         >  1:5686975/1‑148 (MQ=255)
         ggCTCGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTaa                                                                                                                                        >  1:7201186/1‑148 (MQ=255)
          gCTCGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTaaa                                                                                                                                       <  1:9217087/148‑1 (MQ=255)
            tCGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAAt                                                                                                                                     <  1:7689194/148‑1 (MQ=255)
             cGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATa                                                                                                                                    <  1:545322/148‑1 (MQ=255)
              gAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATaa                                                                                                                                   <  1:8011845/148‑1 (MQ=255)
              gAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATaa                                                                                                                                   <  1:9654190/148‑1 (MQ=255)
                aTCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGt                                                                                                                                 <  1:5357712/148‑1 (MQ=255)
                  cTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTtg                                                                                                                               >  1:6382723/1‑148 (MQ=255)
                   ttGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTtgt                                                                                                                              <  1:3929300/148‑1 (MQ=255)
                    tGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTtgtg                                                                                                                             >  1:3779599/1‑148 (MQ=255)
                     gTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTgtgt                                                                                                                            >  1:6722317/1‑148 (MQ=255)
                       ttttAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTaa                                                                                                                          <  1:4605/148‑1 (MQ=255)
                       ttttAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGATGTGTaa                                                                                                                          >  1:10000997/1‑148 (MQ=255)
                         ttAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTATGTAAac                                                                                                                        <  1:5826002/148‑1 (MQ=255)
                             ataatCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGGCTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACaa                                                                                                                    >  1:8326898/1‑148 (MQ=255)
                              taatCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACaaa                                                                                                                   <  1:4540608/148‑1 (MQ=255)
                                atCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGGGTAAACACaaaaa                                                                                                                 >  1:10602544/1‑148 (MQ=255)
                                 tCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAg                                                                                                                >  1:265415/1‑148 (MQ=255)
                                     tttCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAAt                                                                                                            <  1:2242297/148‑1 (MQ=255)
                                     tttCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAAt                                                                                                            <  1:3299555/148‑1 (MQ=255)
                                        ccATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATaaa                                                                                                         <  1:4346444/148‑1 (MQ=255)
                                          aTTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAAGAATAAATc                                                                                                       >  1:10715881/1‑148 (MQ=255)
                                            tttACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCg                                                                                                     >  1:6174839/1‑148 (MQ=255)
                                            tttACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCg                                                                                                     <  1:4915656/148‑1 (MQ=255)
                                                cTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTtat                                                                                                 >  1:2542312/1‑148 (MQ=255)
                                                   tAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGATGTGTAAACACAAAAAGGAATAAATCCGTTAtagt                                                                                              <  1:276770/148‑1 (MQ=255)
                                                   tAATTCCTATCTAGTCTTATCATATATTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGAAATAAATCCGTTAtagt                                                                                              >  1:3419594/1‑148 (MQ=255)
                                                     gttCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGAGTAAACACAAAAAGGAATAGATCCGTTAtagtag                                                                                            <  1:7113971/147‑1 (MQ=255)
                                                      ttCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTaga                                                                                           <  1:418127/148‑1 (MQ=255)
                                                       tCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTagag                                                                                          <  1:6490675/148‑1 (MQ=255)
                                                             cTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGa                                                                                    >  1:11660571/1‑148 (MQ=255)
                                                               aGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGaaa                                                                                  <  1:11253248/148‑1 (MQ=255)
                                                               aGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGCTATAGTAGAGTTGCGaaa                                                                                  >  1:2038071/1‑148 (MQ=255)
                                                                gTCTTATCATAGTTTTTATAATTCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGTATAAATCCGTTCTAGTAGAGTTGTGAAAc                                                                                 <  1:2307646/148‑1 (MQ=37)
                                                                 tCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAACAAATCCGTTATAGTAGAGTTGCGAAACa                                                                                >  1:5249758/1‑148 (MQ=255)
                                                                   ttATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACAtt                                                                              <  1:9782913/148‑1 (MQ=255)
                                                                   ttATCATATTTTTTATAAATCTTGTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACAtt                                                                              >  1:2440771/1‑148 (MQ=255)
                                                                    tATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTa                                                                             >  1:6842780/1‑148 (MQ=255)
                                                                     aTCATATTTTTTATAGATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTAc                                                                            <  1:1707064/148‑1 (MQ=255)
                                                                      caatatTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTACATTTTTCTTTGACTGCACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACt                                                                           >  1:5580099/3‑148 (MQ=255)
                                                                       cATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTa                                                                          >  1:9892519/1‑148 (MQ=255)
                                                                          atTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGaa                                                                       >  1:3187079/1‑148 (MQ=255)
                                                                          atTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGaa                                                                       <  1:8706788/148‑1 (MQ=255)
                                                                           ttttttATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTTAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGaaa                                                                      >  1:7325779/1‑148 (MQ=255)
                                                                             ttttATAAATCTTTTTGATATTTATAATTTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAaga                                                                    <  1:10421176/148‑1 (MQ=255)
                                                                             ttttATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAaga                                                                    <  1:6237135/148‑1 (MQ=255)
                                                                             ttttATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAaga                                                                    <  1:880940/148‑1 (MQ=255)
                                                                               ttATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAgaga                                                                  <  1:10219977/148‑1 (MQ=255)
                                                                                tataAATCTTTTTGATATTTATAAATTATAATATAGTATCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGAt                                                                 >  1:1775548/1‑148 (MQ=255)
                                                                                  taAATCTTTTTGATATTTATAATTTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGAttt                                                               <  1:4752916/148‑1 (MQ=255)
                                                                                  taAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGAttt                                                               <  1:3484425/148‑1 (MQ=255)
                                                                                   aaaTCTTTTTGATATTTATAAATTATACTATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGCTGCGAAACATTACTAGAAAGAGATTTa                                                              >  1:739708/1‑148 (MQ=255)
                                                                                   aaaTCTTTTTGATATTTATAAATTATAATATAGTTTCCTTCTATTTCTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGACTTGCGAAACATTACTAGAAAGAGATTTa                                                              >  1:3596967/1‑148 (MQ=255)
                                                                                     aTCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTAtt                                                            <  1:2895638/148‑1 (MQ=255)
                                                                                     aTCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTAta                                                            >  1:9325799/1‑147 (MQ=255)
                                                                                      tCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTc                                                           >  1:4953344/1‑148 (MQ=255)
                                                                                        tttttGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCt                                                         <  1:3127456/148‑1 (MQ=255)
                                                                                          tttGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTAt                                                       >  1:4002903/1‑148 (MQ=255)
                                                                                           ttGATATTTATAAATTATAATATAGTTTCCATATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATg                                                      >  1:1439136/1‑148 (MQ=255)
                                                                                              atatTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACt                                                   <  1:10785172/148‑1 (MQ=255)
                                                                                              atatTTATAAATTATAATATAGTTTCCTTATATTTATCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACt                                                   <  1:2842432/148‑1 (MQ=255)
                                                                                               tatTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTc                                                  <  1:11421463/148‑1 (MQ=255)
                                                                                                 tttATAAATTATAATATAGTTTCCTTATATGTTTATTTAACTAATCAAAAGGAAGAGTAAAATAAGAATGGTAAATAGAAAAAGGATTAAATCCGTCATAGTCCAGTTGCAAAACATTACTAGAAAGAACTGTATTACTATGatccaa                                                >  1:2169138/1‑143 (MQ=255)
                                                                                                      aaaTTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTAc                                           >  1:599254/1‑148 (MQ=255)
                                                                                                        aTTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACca                                         >  1:3729384/1‑148 (MQ=255)
                                                                                                        aTTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTCTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACca                                         >  1:3837328/1‑148 (MQ=255)
                                                                                                         ttATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACcac                                        >  1:1255329/1‑148 (MQ=255)
                                                                                                           ataataTAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAg                                      >  1:813469/1‑148 (MQ=255)
                                                                                                            taataTAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGa                                     <  1:11077007/148‑1 (MQ=255)
                                                                                                              atatAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAac                                   >  1:3564698/1‑148 (MQ=255)
                                                                                                                ataGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAacta                                 >  1:86104/1‑148 (MQ=255)
                                                                                                                 taGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAactac                                >  1:787750/1‑148 (MQ=255)
                                                                                                                  aGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAactact                               <  1:8944721/148‑1 (MQ=255)
                                                                                                                    tttCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACCGAACTACTTa                             >  1:1570924/1‑148 (MQ=255)
                                                                                                                     ttCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTaa                            >  1:11160424/1‑148 (MQ=255)
                                                                                                                          tttatTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTcc                       <  1:7759110/146‑1 (MQ=255)
                                                                                                                          tataTTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTcc                       >  1:9855092/1‑148 (MQ=255)
                                                                                                                          tataTTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTcc                       <  1:7932741/148‑1 (MQ=255)
                                                                                                                           atatTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCt                      >  1:5120707/1‑148 (MQ=255)
                                                                                                                              tttttCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGc                   >  1:957391/1‑148 (MQ=255)
                                                                                                                                tttCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGccc                 >  1:3213859/1‑148 (MQ=255)
                                                                                                                                  tCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCaa               >  1:8374870/1‑148 (MQ=40)
                                                                                                                                  tCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCaa               >  1:10952647/1‑148 (MQ=40)
                                                                                                                                   cTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCaaa              <  1:4142592/148‑1 (MQ=40)
                                                                                                                                    tttGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCaaaa             >  1:1328066/1‑148 (MQ=39)
                                                                                                                                     ttGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAg            <  1:10479454/148‑1 (MQ=38)
                                                                                                                                     ttGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAg            >  1:9477562/1‑148 (MQ=38)
                                                                                                                                      tGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGc           >  1:661287/1‑148 (MQ=38)
                                                                                                                                         cTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAg        <  1:1921209/148‑1 (MQ=35)
                                                                                                                                         cTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAg        <  1:708658/148‑1 (MQ=35)
                                                                                                                                            gACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAGata     >  1:5205719/1‑148 (MQ=32)
                                                                                                                                            gACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAGata     >  1:10825029/1‑148 (MQ=32)
                                                                                                                                             aCAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAGatat    <  1:7549903/148‑1 (MQ=32)
                                                                                                                                               aaaaGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAGATATtg  >  1:8472102/1‑148 (MQ=11)
                                                                                                                                                   |                                                                                                                                               
AACTCTTCTGGCTCGAATCTTGTTTTTAAATAATCTTTTTCCATTTTACTTTAATTCCTATCTAGTCTTATCATATTTTTTATAAATCTTTTTGATATTTATAAATTATAATATAGTTTCCTTATATTTTTCTTTGACTGGACAAAAGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAGATATTG  >  NC_009004/1646483‑1646773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.