BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_009004	1621387 =	465 (0.690)	683 (1.010)	249/294	0.2	59.5%	intergenic (‑95/+113)	LLMG_RS08265/LLMG_RS08270	2,3‑butanediol dehydrogenase/FtsW/RodA/SpoVE family cell cycle protein
*	?	NC_009004	1859127 =	NA (NA)	683 (1.010)	249/294	0.2	59.5%	coding (38/1458 nt)	LLMG_RS09385	4‑alpha‑glucanotransferase

Only 100 of 681 total aligned reads displayed.

TCTACAGAATCGTGAGCAATTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAGATAT  >  NC_009004/1858980‑1859268

tCTACAGAATCGTGAGCAATTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTg                                                                                                                                               >  1:3340835/1‑148 (MQ=255)

tCTACAGAATCGTGAGCAATTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTg                                                                                                                                               >  1:8614600/1‑148 (MQ=255)

tCTACAGAATCGTGAGCAATTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTg                                                                                                                                               >  1:9516171/1‑148 (MQ=255)

 cTACAGAATCGTGAGCAATTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTgg                                                                                                                                              <  1:10705092/148‑1 (MQ=255)

  tACAGAATCGTGAGCAATTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGt                                                                                                                                             <  1:4638137/148‑1 (MQ=255)

      gAATCGTGAGGAATTCCAATCGCTATGTCTCCTATTAAAGTAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATAATGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAgtg                                                                                                                                         <  1:3874341/148‑1 (MQ=255)

        aTCGTGAGCAATTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTa                                                                                                                                       <  1:6965817/148‑1 (MQ=255)

           gTGAGCAATTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTaaaa                                                                                                                                    >  1:3266169/1‑148 (MQ=255)

           gTGAGCAATTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTaaaa                                                                                                                                    >  1:10356711/1‑148 (MQ=255)

              aGCAATCCCTACCGCTATGTCTACTTGTAAAGCAATTCCTAATTTATGACAATAAGCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATaa                                                                                                                                 <  1:7399560/148‑1 (MQ=255)

               gCAATTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAg                                                                                                                                >  1:1793932/1‑148 (MQ=255)

                 aaTTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATGTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTGTTTTCGGTAGTGTAAAATAAGtt                                                                                                                              <  1:4265610/148‑1 (MQ=255)

                 aaTTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGtt                                                                                                                              <  1:10024451/148‑1 (MQ=255)

                 aaTTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGtt                                                                                                                              <  1:8757902/148‑1 (MQ=255)

                 aaTTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGtt                                                                                                                              >  1:9317346/1‑148 (MQ=255)

                  aTTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTtg                                                                                                                             <  1:1534594/148‑1 (MQ=255)

                    tCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTtgtg                                                                                                                           <  1:10860877/148‑1 (MQ=255)

                     ccAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTgtgt                                                                                                                          <  1:9677587/148‑1 (MQ=255)

                     ccAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTgtgt                                                                                                                          >  1:5261068/1‑148 (MQ=255)

                         tCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAac                                                                                                                      >  1:10587501/1‑148 (MQ=255)

                         tCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAac                                                                                                                      >  1:2362998/1‑148 (MQ=255)

                         tCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAac                                                                                                                      >  1:8883318/1‑148 (MQ=255)

                            cTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAAcaca                                                                                                                   >  1:9757625/1‑148 (MQ=255)

                             tATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACaa                                                                                                                  >  1:4348750/1‑148 (MQ=255)

                              aTGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACaaa                                                                                                                 >  1:6127665/1‑148 (MQ=255)

                                gTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACaaaaa                                                                                                               >  1:8180874/1‑148 (MQ=255)

                                   tcCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGa                                                                                                            <  1:11524136/148‑1 (MQ=255)

                                   tcCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGa                                                                                                            <  1:7889399/148‑1 (MQ=255)

                                    ccTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGaa                                                                                                           <  1:10979283/148‑1 (MQ=255)

                                     cTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAAt                                                                                                          >  1:1440885/1‑148 (MQ=255)

                                     cTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAAt                                                                                                          <  1:6199561/148‑1 (MQ=255)

                                        ttAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATaaa                                                                                                       <  1:6323727/148‑1 (MQ=255)

                                         tAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAAt                                                                                                      <  1:654326/148‑1 (MQ=255)

                                         tAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACAAAAAAAGGAATAAAt                                                                                                      >  1:11088728/1‑148 (MQ=255)

                                               aaTTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTta                                                                                                >  1:1911685/1‑148 (MQ=255)

                                                aTTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTtat                                                                                               <  1:2101804/148‑1 (MQ=255)

                                                 ttCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTtata                                                                                              >  1:8266238/1‑148 (MQ=255)

                                                  tCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTAtag                                                                                             <  1:7183658/148‑1 (MQ=255)

                                                     tAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTAtagtag                                                                                          >  1:1386750/1‑148 (MQ=255)

                                                      aaTTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTaga                                                                                         >  1:10112916/1‑148 (MQ=255)

                                                       aTTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATTAATCCGTTATAGTagag                                                                                        <  1:3596397/148‑1 (MQ=255)

                                                        tttATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGt                                                                                       <  1:8521212/148‑1 (MQ=255)

                                                         ttATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGtt                                                                                      >  1:8845217/1‑148 (MQ=255)

                                                              aCAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGaa                                                                                 <  1:10242110/148‑1 (MQ=255)

                                                               cAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGaaa                                                                                >  1:5821249/1‑148 (MQ=255)

                                                                 ataatCTCCTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACa                                                                              <  1:9174657/148‑1 (MQ=255)

                                                                 ataatCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACa                                                                              <  1:1963537/148‑1 (MQ=255)

                                                                 ataatCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACa                                                                              >  1:1651247/1‑148 (MQ=255)

                                                                  taatCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACAt                                                                             >  1:731147/1‑148 (MQ=255)

                                                                   attCTACTGCTTCAGTAAGTTGAGAATGGAGATGATATTGCACAAAAATATATAAATCTAAGTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACAtt                                                                            <  1:2424862/146‑1 (MQ=255)

                                                                      cTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACt                                                                         >  1:3497628/1‑148 (MQ=255)

                                                                      cTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGCCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACt                                                                         <  1:4505715/148‑1 (MQ=255)

                                                                        aCTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGCAACATTACTAg                                                                       >  1:4898884/1‑148 (MQ=255)

                                                                          tGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGaa                                                                     <  1:7545813/148‑1 (MQ=255)

                                                                          tGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGaa                                                                     >  1:7256653/1‑148 (MQ=255)

                                                                               cAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGGTATAGTAGAGTTGCGAAACATTACTAGAAAgaga                                                                >  1:3691140/1‑148 (MQ=255)

                                                                                aGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGAt                                                               <  1:6680796/148‑1 (MQ=255)

                                                                                 gTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACAGAAAAAGGAATAAATCCGTTATAGTAGAGTTGCCAAACATTACTAGAAAGAGAtt                                                              <  1:1328471/148‑1 (MQ=255)

                                                                                  tAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACAC‑TAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTa                                                            >  1:5934615/1‑148 (MQ=255)

                                                                                    aGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTAt                                                           <  1:5756739/148‑1 (MQ=255)

                                                                                      ttGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTc                                                         >  1:2794340/1‑148 (MQ=255)

                                                                                       tGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTcc                                                        >  1:2729884/1‑148 (MQ=255)

                                                                                           aaTGGAGAAGATATTGCACAAAAATATTTAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATg                                                    <  1:9001779/148‑1 (MQ=255)

                                                                                            aTGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCGTATGa                                                   <  1:2906829/148‑1 (MQ=255)

                                                                                            aTGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGa                                                   <  1:7003336/148‑1 (MQ=255)

                                                                                            aTGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGa                                                   <  1:3728773/148‑1 (MQ=255)

                                                                                                agaagaTATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCa                                               >  1:10492622/1‑148 (MQ=255)

                                                                                                   agaTATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGtt                                            <  1:4754851/148‑1 (MQ=255)

                                                                                                    gaTATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGttt                                           >  1:8369344/1‑148 (MQ=255)

                                                                                                    gaTATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGttt                                           >  1:9874310/1‑148 (MQ=255)

                                                                                                    gaTATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGttt                                           <  1:1171516/148‑1 (MQ=255)

                                                                                                     atatTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTa                                          >  1:3011487/1‑148 (MQ=255)

                                                                                                      tatTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTAc                                         >  1:5350291/1‑148 (MQ=255)

                                                                                                      tatTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTAc                                         >  1:5116990/1‑148 (MQ=255)

                                                                                                       atTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTAcc                                        >  1:2670660/1‑148 (MQ=255)

                                                                                                       atTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGATTAcc                                        >  1:5020917/1‑148 (MQ=255)

                                                                                                        ttGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTTGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACca                                       >  1:546828/1‑148 (MQ=255)

                                                                                                         tGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACcac                                      <  1:8002784/148‑1 (MQ=255)

                                                                                                          gCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACcaca                                     >  1:4423078/1‑148 (MQ=255)

                                                                                                                 aaTATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAactac                              <  1:5666244/148‑1 (MQ=255)

                                                                                                                  atatatAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAACGAATAAATCCGTTATAGTAGAGATGCGAAACATTACTAGAAAGGGATTTATTCCTATGACTCAGTTTACCACAGAactact                             >  1:704807/1‑148 (MQ=255)

                                                                                                                   tatataAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACtt                            <  1:8550322/148‑1 (MQ=255)

                                                                                                                    atataAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTa                           >  1:1127522/1‑148 (MQ=255)

                                                                                                                    atataAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTa                           >  1:4172286/1‑148 (MQ=255)

                                                                                                                     tataAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTaa                          >  1:3083256/1‑148 (MQ=255)

                                                                                                                      ataAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAAc                         >  1:10417224/1‑148 (MQ=255)

                                                                                                                      ataAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAAc                         >  1:1886483/1‑148 (MQ=255)

                                                                                                                        aaaTCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACtt                       >  1:9418957/1‑148 (MQ=255)

                                                                                                                         aaTCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTc                      <  1:2243573/148‑1 (MQ=255)

                                                                                                                           tCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAAGTACTTAACTTCCt                    <  1:2550466/148‑1 (MQ=255)

                                                                                                                           tCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCt                    <  1:7728425/148‑1 (MQ=255)

                                                                                                                            cTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTa                   >  1:5586915/1‑148 (MQ=255)

                                                                                                                            cTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACATCCTa                   <  1:4116680/148‑1 (MQ=255)

                                                                                                                              aaCTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGc                 <  1:9557536/148‑1 (MQ=255)

                                                                                                                              aaCTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGc                 <  1:11170798/148‑1 (MQ=255)

                                                                                                                                  ggCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCaa             <  1:1270312/148‑1 (MQ=38)

                                                                                                                                    cTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGTAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCaaaa           >  1:3976201/1‑148 (MQ=37)

                                                                                                                                    cTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCaaaa           <  1:2847710/148‑1 (MQ=37)

                                                                                                                                            tttttttGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAGata   <  1:6042740/148‑1 (MQ=31)

                                                                                                                                             ttttttGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAGatat  >  1:11370801/1‑148 (MQ=11)

TCTACAGAATCGTGAGCAATTCCAATCGCTATGTCTCCTTTTAAAGCAATTCCTAATTTATGACAATAATCTACTGCTTCAGTAAGTTGAGAATGGAGAAGATATTGCACAAAAATATATAAATCTAACTGGCTAGTCTCTTTTTTTGGTAGTGTAAAATAAGTTGTGTAAACACAAAAAGGAATAAATCCGTTATAGTAGAGTTGCGAAACATTACTAGAAAGAGATTTATTCCTATGACTCAGTTTACCACAGAACTACTTAACTTCCTAGCCCAAAAGCAAGATAT  >  NC_009004/1858980‑1859268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.