| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_009004 | 617,310 | A→C | S8S (TCA→TCC) | LLMG_RS03280 → | magnesium transporter CorA family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_009004 | 617,310 | 0 | A | C | 99.9% | 2952.3 / NA | 727 | S8S (TCA→TCC) | LLMG_RS03280 | magnesium transporter CorA family protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (387/339); minor base T (1/0); total (388/339) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 731 total aligned reads displayed.
TTTTCGTTAAGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCAAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGAAAAT > NC_009004/617165‑617454 | cGTTAAGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑aa > 1:1167508/1‑148 (MQ=255) tAAGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑aaaaa > 1:3828913/1‑148 (MQ=255) aaGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑aaaaaa < 1:2473387/148‑1 (MQ=255) aaGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑aaaaaa < 1:4751591/148‑1 (MQ=255) aGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑aaaaaaa < 1:1853545/148‑1 (MQ=255) aGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑aaaaaaa < 1:4552807/148‑1 (MQ=255) tttGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTg < 1:10517692/148‑1 (MQ=255) ttGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGa > 1:3458369/1‑148 (MQ=255) ttGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGa > 1:4405346/1‑148 (MQ=255) ttGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGa < 1:7910143/148‑1 (MQ=255) aaataaaataATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGAtct < 1:8196760/148‑1 (MQ=255) aataaaataaTGAGAAAATAATAGGAAAACCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGAtctc < 1:6862166/148‑1 (MQ=255) aataaaataaTAAAAAAAAAATAGTAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGAtctc > 1:4329268/1‑148 (MQ=255) ataaaataaTGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCa > 1:8949036/1‑148 (MQ=255) ataaaataaTGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCa > 1:2361317/1‑148 (MQ=255) taaaataaTGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCaa < 1:5452956/148‑1 (MQ=255) aatGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTg < 1:3086936/148‑1 (MQ=255) gagaAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTgaga > 1:7982437/1‑148 (MQ=255) agaAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGAt > 1:7721518/1‑148 (MQ=255) gaAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATg < 1:3580071/148‑1 (MQ=255) gaAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATg > 1:1700711/1‑148 (MQ=255) aaaaaaaTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATga > 1:1027871/1‑148 (MQ=255) aaaaaaTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATgaa > 1:1152627/1‑148 (MQ=255) aaaaaTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATgaag < 1:7056467/148‑1 (MQ=255) aaaaTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATgaaga > 1:9450050/1‑148 (MQ=255) aTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAAtt > 1:2980821/1‑148 (MQ=255) aTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAAtt > 1:2110551/1‑148 (MQ=255) aTAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAAtt > 1:10435227/1‑148 (MQ=255) tAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAAttt > 1:9388657/1‑148 (MQ=255) gAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCAc > 1:635157/1‑148 (MQ=255) aaaaTCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACt < 1:8257714/148‑1 (MQ=255) aaaTCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACtt > 1:731697/1‑148 (MQ=255) cTACAATTAGTAGGAGAAGAAGAGCATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATACATAGGCTGATATGATAAAACATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCt > 1:11406893/1‑148 (MQ=255) cTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCt < 1:2821474/148‑1 (MQ=255) aCAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCa > 1:8599962/1‑148 (MQ=255) cAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCaa > 1:10897163/1‑148 (MQ=255) aaTTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAAt > 1:4978393/1‑148 (MQ=255) aaTTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAAt < 1:6261769/148‑1 (MQ=255) aTTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATc < 1:4154633/148‑1 (MQ=255) tAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCa > 1:1361258/1‑148 (MQ=255) aGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCaa < 1:8802927/148‑1 (MQ=255) gAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAac < 1:6419156/148‑1 (MQ=255) aaGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAaca < 1:9042054/148‑1 (MQ=255) aGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAacac > 1:6733416/1‑148 (MQ=255) ggAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACg > 1:2000355/1‑148 (MQ=255) ggAGAAGAAGAGGACTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACg < 1:3648570/148‑1 (MQ=255) gagaAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGt < 1:10832843/148‑1 (MQ=255) agaagaagaGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTg > 1:5064963/1‑148 (MQ=255) agaagaagaGGACTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTg < 1:1473916/148‑1 (MQ=255) aagaGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTgaagga > 1:2605468/1‑146 (MQ=255) aaaTCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAata < 1:6616445/148‑1 (MQ=255) aaTCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAatat > 1:1256766/1‑148 (MQ=255) tCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATAtct > 1:7853765/1‑148 (MQ=255) tCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATAtct > 1:10099556/1‑148 (MQ=255) tCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATAtct > 1:3950397/1‑148 (MQ=255) ccTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATAtctc > 1:9651633/1‑148 (MQ=255) cTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCCCa > 1:219772/1‑148 (MQ=255) ttttttATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAg < 1:5782222/148‑1 (MQ=255) tttttATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGa > 1:8455069/1‑148 (MQ=255) tttATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAac < 1:7202636/148‑1 (MQ=255) atattaGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAaca > 1:468716/2‑148 (MQ=255) ttaGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATGAAAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACt > 1:8526542/1‑148 (MQ=255) aGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATg > 1:10980816/1‑148 (MQ=255) aGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATg > 1:2060552/1‑148 (MQ=255) ggAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGa < 1:7429784/148‑1 (MQ=255) ggAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCACAACACTATGa > 1:1573571/1‑148 (MQ=255) gAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGAt > 1:9153933/1‑148 (MQ=255) gAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGAt < 1:10636696/148‑1 (MQ=255) aaaGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGAttt < 1:10733108/148‑1 (MQ=255) aagaagGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGAtttt > 1:9585878/1‑148 (MQ=255) agaagGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTc < 1:6491731/148‑1 (MQ=255) aagGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCt > 1:11079531/1‑148 (MQ=255) agGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCtt < 1:6972316/148‑1 (MQ=255) agGGAAAGATAGGCTGATATGATAAAAAATTATCAACTATCCAATG‑AAAAAAAATTGATGTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCtt < 1:100338/148‑1 (MQ=255) ggATAGATAGGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATATCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCtttt < 1:3290887/148‑1 (MQ=255) tagatagGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGAc > 1:4501429/1‑148 (MQ=255) gatagGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGActa > 1:8358007/1‑148 (MQ=255) atagGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGActat > 1:5988953/1‑148 (MQ=255) atagGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGActat < 1:9255126/148‑1 (MQ=255) tagGCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGActatc > 1:5869707/1‑148 (MQ=255) ggCTGATATGATAAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGActatcta < 1:4890202/148‑1 (MQ=255) gatatgataAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTg > 1:11621842/1‑148 (MQ=255) atatgataAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTgg < 1:3526089/148‑1 (MQ=255) atgataAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGaa < 1:113681/148‑1 (MQ=255) atgataAAAAATTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGaa < 1:5511669/148‑1 (MQ=255) aaaaaTTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAg < 1:9822100/148‑1 (MQ=255) aaaaaTTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAg > 1:3153025/1‑148 (MQ=255) aaaaaTTATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAg < 1:5634340/148‑1 (MQ=255) ttATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGAc > 1:3252074/1‑148 (MQ=255) ttATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGAc > 1:6123073/1‑148 (MQ=255) tATGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACt < 1:5191096/148‑1 (MQ=255) tGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTAt > 1:8711486/1‑148 (MQ=255) tGAACTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTAt < 1:10349800/148‑1 (MQ=255) aaCTATCCAATG‑AAATAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGa < 1:4029408/148‑1 (MQ=255) aCTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGaa > 1:11150893/1‑148 (MQ=255) aCTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGaa < 1:7107944/148‑1 (MQ=255) cTATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGaaa < 1:10171453/148‑1 (MQ=255) tATCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGaaaa < 1:11302486/148‑1 (MQ=255) aTCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGAAAAt > 1:8097192/1‑148 (MQ=255) aTCCAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGAAAAt > 1:7551731/1‑148 (MQ=255) | TTTTCGTTAAGGCTTTGAAATAAAATAATGAGAAAAAAATAGGAAAATCTGCTACAATTAGAAGGAGAAGAAGAGGATTTAAATCCTTTTTTATTAGGAAAAGAAGGGATAGATAGGCTGATATGATAAAAAATTATGAACTATCAAATG‑AAAAAAAATTGATCTCAACTTCTGAGATGAAGAATTTCACTTATGTCCTCAATCCAACACGTGAAGAAATTGGGAATATCTCAGAACACTATGATTTTCCTTTTGACTATCTATCTGGAATTTTAGATGACTATGAAAAT > NC_009004/617165‑617454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |