New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_009004 58654 =NA (NA)669 (0.990) 252/294 0.3 96.0% intergenic (‑162/+48) LLMG_RS00350/LLMG_RS00355 SulP family inorganic anion transporter/IS256‑like element IS905 family transposase
?NC_009004 186009 = 28 (0.040)coding (108/906 nt) LLMG_RS01040 prenyltransferase

Only 100 of 789 total aligned reads displayed.

TTTTTTATCACAATATTCTATGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCTTCAAACAAAGTAACTA  >  NC_009004/58507‑58799
                                                                                                                                                   |                                                                                                                                                 
 tttttATCACAATATTCTATGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGa                                                                                                                                                  >  1:1093045/1‑148 (MQ=255)
  ttttATCACAATATTCTATGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGAt                                                                                                                                                 >  1:626038/1‑148 (MQ=255)
  ttttACCACAATATTCTATGATAGCAGAGATAACTGATCTAATCAAATAATTATCGGAAGCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGAt                                                                                                                                                 <  1:573327/148‑1 (MQ=255)
    ttATCACAATATTCTATGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATAc                                                                                                                                               >  1:5470996/1‑148 (MQ=255)
     tATCACAATATTCTATGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACt                                                                                                                                              >  1:7280530/1‑148 (MQ=255)
        cacaATATTCTATGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTc                                                                                                                                           >  1:11545276/1‑148 (MQ=255)
        cacaATATTCTATGATAGCACAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTc                                                                                                                                           >  1:3528862/1‑148 (MQ=255)
           cttatTCTATGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCaat                                                                                                                                        <  1:2743691/146‑1 (MQ=255)
            atatTCTATGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCaata                                                                                                                                       <  1:7911851/148‑1 (MQ=255)
               ttCTATGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAAtt                                                                                                                                    >  1:8488731/1‑148 (MQ=255)
                  tATGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAACTAtg                                                                                                                                 >  1:968927/1‑148 (MQ=255)
                   aTGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTAtgt                                                                                                                                >  1:8938655/1‑148 (MQ=255)
                      aTAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTa                                                                                                                             >  1:10617100/1‑148 (MQ=255)
                       tAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTaa                                                                                                                            <  1:10860616/148‑1 (MQ=255)
                         gCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGACAATACTGTCAATAATTATGTGTAAac                                                                                                                          <  1:165447/148‑1 (MQ=255)
                         gCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAac                                                                                                                          >  1:8128709/1‑148 (MQ=255)
                           agagATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAacac                                                                                                                        <  1:2066559/148‑1 (MQ=255)
                             agaTAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTc                                                                                                                      >  1:4124126/1‑148 (MQ=255)
                              gaTAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCa                                                                                                                     <  1:7134543/148‑1 (MQ=255)
                               aTAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCaa                                                                                                                    >  1:11307691/1‑148 (MQ=255)
                               aTAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCaa                                                                                                                    >  1:25008/1‑148 (MQ=255)
                                 aaGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGt                                                                                                                  >  1:9800069/1‑148 (MQ=255)
                                 aaGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGt                                                                                                                  <  1:8442021/148‑1 (MQ=255)
                                  aGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTa                                                                                                                 <  1:6168741/148‑1 (MQ=255)
                                          aaTCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGGAGAGTTgaa                                                                                                         >  1:5601753/1‑148 (MQ=255)
                                           aTCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTgaag                                                                                                        >  1:10693495/1‑148 (MQ=255)
                                             cAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTgaagaa                                                                                                      <  1:8334588/148‑1 (MQ=255)
                                                ataatTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAatat                                                                                                   >  1:2843588/1‑148 (MQ=255)
                                                 taatTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATATTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATAtt                                                                                                  <  1:7377275/148‑1 (MQ=255)
                                                  aatTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTa                                                                                                 <  1:7987052/148‑1 (MQ=255)
                                                   atTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTaa                                                                                                <  1:5212979/148‑1 (MQ=255)
                                                     tATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATc                                                                                              <  1:5982754/148‑1 (MQ=255)
                                                     tATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATc                                                                                              <  1:10481080/148‑1 (MQ=255)
                                                      aTCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCa                                                                                             >  1:3305158/1‑148 (MQ=255)
                                                       tCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCaa                                                                                            >  1:3234400/1‑148 (MQ=255)
                                                       tCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCaa                                                                                            <  1:11132872/148‑1 (MQ=255)
                                                       ccGGAAGCGAAATAAAATCAAGATTAGATAGATATTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCaa                                                                                            <  1:9084118/147‑1 (MQ=255)
                                                          gAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATa                                                                                         >  1:7769986/1‑148 (MQ=255)
                                                          gAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATa                                                                                         >  1:11057722/1‑148 (MQ=255)
                                                          gAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATa                                                                                         >  1:4721136/1‑148 (MQ=255)
                                                          gAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATa                                                                                         <  1:4386507/148‑1 (MQ=255)
                                                              cGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCt                                                                                     <  1:5902095/148‑1 (MQ=255)
                                                                aaaTAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCttt                                                                                   <  1:9514270/148‑1 (MQ=255)
                                                                aaaTAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCttt                                                                                   >  1:6572980/1‑148 (MQ=255)
                                                                  aTAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCa                                                                                 >  1:1009383/1‑148 (MQ=255)
                                                                  aTAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCa                                                                                 >  1:1217793/1‑148 (MQ=255)
                                                                   tAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCaa                                                                                <  1:11351361/148‑1 (MQ=255)
                                                                    aaaaTCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAg                                                                               >  1:2423918/1‑148 (MQ=255)
                                                                    aaaaTCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAg                                                                               <  1:6079958/148‑1 (MQ=255)
                                                                     aaaTCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAgt                                                                              <  1:9272087/148‑1 (MQ=255)
                                                                        tCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAgtgtg                                                                           >  1:5407661/1‑148 (MQ=255)
                                                                         cAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAgtgtgt                                                                          <  1:10389917/148‑1 (MQ=255)
                                                                         cAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAgtgtgt                                                                          >  1:5083809/1‑148 (MQ=255)
                                                                             aTTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGc                                                                      <  1:1336176/148‑1 (MQ=255)
                                                                                 gatagatTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACAt                                                                  <  1:7636011/148‑1 (MQ=255)
                                                                                 gatagatTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACAt                                                                  <  1:1460766/148‑1 (MQ=255)
                                                                                     gatTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTATCAAGTGTGTCAGCACATTGGc                                                              >  1:9196448/1‑148 (MQ=255)
                                                                                      atTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGcc                                                             <  1:4226142/148‑1 (MQ=255)
                                                                                        tttttGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCaa                                                           <  1:11445223/148‑1 (MQ=255)
                                                                                         ttttGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCaaa                                                          <  1:3704087/148‑1 (MQ=255)
                                                                                         ttttGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCaaa                                                          >  1:10151569/1‑148 (MQ=255)
                                                                                           ttGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAAcc                                                        <  1:7484742/148‑1 (MQ=255)
                                                                                              tAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCtt                                                     <  1:5286520/148‑1 (MQ=255)
                                                                                                aTTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTa                                                   <  1:6980216/148‑1 (MQ=255)
                                                                                                     aaaaCCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGAt                                              <  1:10000508/148‑1 (MQ=255)
                                                                                                          cAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGtt                                         >  1:10548333/1‑148 (MQ=255)
                                                                                                          cAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGtt                                         >  1:3053764/1‑148 (MQ=255)
                                                                                                           aGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTg                                        >  1:8056262/1‑148 (MQ=255)
                                                                                                             aaaaTAAATTTATTACTAATATCTAATGAAAAATTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAACCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGAc                                      <  1:6914890/148‑1 (MQ=255)
                                                                                                             aaaaTAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGAc                                      <  1:4626604/148‑1 (MQ=255)
                                                                                                               aataaatTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACtt                                    <  1:1834466/148‑1 (MQ=255)
                                                                                                                ataaatTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACttt                                   >  1:2317567/1‑148 (MQ=255)
                                                                                                                 taaatTTTTTACTAATATCTACTGAAAAACTGAAGATATTGACAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTATCAAGTGTGTCAGCTCATTGGCCAAACCCTTTATGGATGCGTTGACtttt                                  <  1:2544004/148‑2 (MQ=17)
                                                                                                                 taaatTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTg                                  <  1:3448814/148‑1 (MQ=255)
                                                                                                                 taaatTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTg                                  >  1:1029093/1‑148 (MQ=255)
                                                                                                                 taaatTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTg                                  <  1:8225423/148‑1 (MQ=255)
                                                                                                                    atTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCtt                               <  1:9884617/148‑1 (MQ=255)
                                                                                                                     tttATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTg                              >  1:8696198/1‑148 (MQ=255)
                                                                                                                       tattaCTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGaa                            <  1:9344159/148‑1 (MQ=255)
                                                                                                                        attaCTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGaaa                           <  1:5820391/148‑1 (MQ=255)
                                                                                                                         ttaCTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAAt                          >  1:4076953/1‑148 (MQ=255)
                                                                                                                         ttaCTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAAt                          >  1:3375751/1‑148 (MQ=255)
                                                                                                                         ttaCTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAAt                          >  1:642361/1‑148 (MQ=255)
                                                                                                                          taCTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAAtt                         <  1:4829738/148‑1 (MQ=255)
                                                                                                                           aCTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATta                        >  1:888479/1‑148 (MQ=255)
                                                                                                                           aCTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATta                        >  1:4947951/1‑148 (MQ=255)
                                                                                                                               atatCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAAt                    <  1:1728651/148‑1 (MQ=255)
                                                                                                                                tatCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATc                   <  1:3106426/148‑1 (MQ=255)
                                                                                                                                 atCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCt                  <  1:2675453/148‑1 (MQ=255)
                                                                                                                                   cTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGTAATTATAATCTTc                >  1:6812118/1‑148 (MQ=255)
                                                                                                                                     aaTGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCTTcaa              >  1:4494031/1‑148 (MQ=40)
                                                                                                                                     aaTCAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATATGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGTCTTTGCTTGAAATTATAATCTTcaa              >  1:1909387/1‑148 (MQ=255)
                                                                                                                                      aTGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCTTcaaa             >  1:6703807/1‑148 (MQ=39)
                                                                                                                                        gAAAATCTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCTTcaaaca           <  1:3980308/148‑1 (MQ=25)
                                                                                                                                        gAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCTTcaaaca           >  1:9052218/1‑148 (MQ=38)
                                                                                                                                        gAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCTTcaaaca           <  1:9581628/148‑1 (MQ=38)
                                                                                                                                          aaaaCTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCTTcaaacaaa         >  1:3798840/1‑148 (MQ=35)
                                                                                                                                            aaCTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCTTCAAACAAAGt       <  1:8581285/148‑1 (MQ=34)
                                                                                                                                            aaCTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCTTCAAACAAAGt       <  1:11229943/148‑1 (MQ=34)
                                                                                                                                            aaCTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCTTCAAACAAAGt       >  1:296931/1‑148 (MQ=34)
                                                                                                                                                   |                                                                                                                                                 
TTTTTTATCACAATATTCTATGATAGCAGAGATAAGTGATCTAATCAAATAATTATCGGAATCGAAATAAAATCAAGATTAGATAGATTTTTTGTAATTAAAAAACCAGAAAATAAATTTATTACTAATATCTAATGAAAAACTGAAGATACTGTCAATAATTATGTGTAAACACTCAAGTAGAGTTGAAGAATATTAATCAAATAAGCTTTCAAGTGTGTCAGCACATTGGCCAAACCCTTTATGGATGCGTTGACTTTGCTTGAAATTATAATCTTCAAACAAAGTAACTA  >  NC_009004/58507‑58799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.