| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 365992 | 308 (0.820) | 972 (2.630) | 253/294 | 0.0 | 74.3% | noncoding (2/1223 nt) | IS30 | repeat region |
| ? | CP009273 | 367216 = | 367 (0.990) | pseudogene (3/348 nt) | mhpC | pseudogene, IS30 insertion | |||||
Only 100 of 1309 total aligned reads displayed.
CCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATA > CP009273/365843‑366139 | cTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGAtt < 1:3780983/150‑1 (MQ=255) cTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATg > 2:863862‑M1/1‑149 (MQ=255) ttAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTg > 2:5847593/1‑150 (MQ=255) tAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGACGCTGATGATgga > 2:2444460‑M1/1‑147 (MQ=255) tAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATgga < 2:1744322‑M1/150‑4 (MQ=255) tttgccgGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatat > 2:3801425‑M1/4‑144 (MQ=255) aTGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatat > 1:340995‑M1/1‑144 (MQ=255) ggCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatct < 1:1920413‑M1/150‑9 (MQ=255) ggAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgt > 1:4447059‑M1/1‑138 (MQ=255) ggAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAAt > 1:4163438/1‑150 (MQ=255) cgcgTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGTAGCTGATGATggatatcttggttgtg > 1:3660248‑M1/1‑134 (MQ=255) gcgTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttg > 1:1541430‑M1/1‑133 (MQ=255) gcgTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttg < 1:2570717‑M1/150‑18 (MQ=255) ggCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgatacc > 1:1009799‑M1/1‑128 (MQ=255) gCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgatacca < 2:4923106‑M1/150‑24 (MQ=255) aaaCTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccatc > 1:3043331‑M1/1‑125 (MQ=255) aaaCTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAAc > 2:5128951/1‑150 (MQ=255) aaCTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAATCCTGAAGCTGATGATTGTAGATTCAATTGGGCAACGCAACa > 2:4166645/1‑150 (MQ=255) aaCTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcg > 2:5546783‑M1/1‑124 (MQ=255) aaCTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcg > 1:1096541‑M1/1‑124 (MQ=255) tGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatt < 1:3536020‑M1/150‑30 (MQ=255) gCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTAtgt > 2:5432935/1‑150 (MQ=255) gATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccga < 2:2558024‑M1/150‑37 (MQ=255) gATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccga < 1:5071962‑M1/150‑37 (MQ=255) aTGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgac > 1:664640‑M1/1‑113 (MQ=255) tGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacg > 1:4784263‑M1/1‑112 (MQ=255) cggcggTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGATTCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccct < 1:4578419‑M1/150‑43 (MQ=255) gcggTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATggg < 1:3205446/150‑1 (MQ=255) cggTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtt < 2:2832619‑M1/150‑46 (MQ=255) gTACGGGCGGCATGGGTATGTTTACGCCGATCCCAACCGAAGGTATAAAGCGACTGAATCAGCATTATCGTCAGACGACAAACGAACACCTGAAGCTCATCATggatatcttcgtttttgataccagcgatttgaccgacgccctgtatg > 2:3634902‑M1/1‑103 (MQ=255) gTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttg > 1:555715‑M1/1‑103 (MQ=255) gTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGtt < 1:1319602/150‑1 (MQ=255) tACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttga < 2:4521522‑M1/150‑49 (MQ=255) cGGTCGGCATGTGTTTTTTTACTCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTTATGATggatatcttagtttttgataccagcgatttgaccgacgccctgtttgaag < 1:5763464‑M1/150‑51 (MQ=255) gggCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagc < 2:1269143‑M1/150‑52 (MQ=255) ggcggcATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctggttgaagcg > 1:6113805‑M1/1‑98 (MQ=255) ggcATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGt < 1:5465130/150‑1 (MQ=255) tGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctga > 2:225329‑M1/1‑91 (MQ=255) tGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctga > 1:2677414‑M1/1‑91 (MQ=255) tGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctga > 1:2801506‑M1/1‑91 (MQ=255) gAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtttttt > 1:3896287/1‑150 (MQ=255) tttgtttACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataa > 1:1620566‑M1/1‑87 (MQ=255) ttgtttACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAAt > 2:307346/1‑150 (MQ=255) tgtttACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataata < 1:2470455‑M1/150‑66 (MQ=255) cGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTACCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgt > 2:2631807‑M1/1‑79 (MQ=255) gCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtc > 2:184243‑M1/1‑78 (MQ=255) gCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGaa > 2:159307/1‑150 (MQ=255) ccGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcg > 2:4690115‑M1/1‑77 (MQ=255) tGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgcc > 1:1404613‑M1/1‑73 (MQ=255) tGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgcc < 1:2288592‑M1/150‑78 (MQ=255) tGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgcc < 2:3586541‑M1/150‑78 (MQ=255) tGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgcc < 1:4380660‑M1/150‑78 (MQ=255) aaCCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcga > 1:3145273‑M1/1‑69 (MQ=255) aaCCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTAcag > 2:2891992/1‑150 (MQ=255) ccGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatc > 1:5897722‑M1/1‑67 (MQ=255) ccGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatc < 1:5264670‑M1/150‑84 (MQ=255) cGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatca > 2:634833‑M1/1‑66 (MQ=255) aaGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacc > 1:2165628‑M1/1‑64 (MQ=255) aaGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacc < 2:1074017‑M1/150‑87 (MQ=255) aaGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCagag > 1:4264574/1‑150 (MQ=255) gTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgatacccgcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctgg > 2:5275784‑M1/1‑61 (MQ=255) aTTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaa > 2:210329‑M1/1‑59 (MQ=255) aTTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaa > 2:3313752‑M1/1‑59 (MQ=255) ttAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGTAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccgtgtttgaagcggggctgtataatttgctgtcgagccgcgatctgctggaga > 1:4931354‑M1/1‑58 (MQ=255) ttAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaa > 2:3160937‑M1/1‑58 (MQ=255) ttAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaa > 2:3498709‑M1/1‑58 (MQ=255) gACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcg < 2:2938245‑M1/150‑99 (MQ=255) aCTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTg < 2:5960541/150‑1 (MQ=255) tGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgtta < 1:2083980‑M1/150‑102 (MQ=255) tGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgtta > 2:4316436‑M1/1‑49 (MQ=255) tGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGtt > 1:5159871/1‑150 (MQ=255) aaTCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaag > 2:6053534‑M1/1‑47 (MQ=255) cAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagc > 1:1160861‑M1/1‑44 (MQ=255) cAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGa < 1:5347543/150‑1 (MQ=255) aGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcc < 2:1137233‑M1/150‑108 (MQ=255) aGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcc < 2:4241316‑M1/150‑108 (MQ=255) gCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcct < 2:1980148‑M1/150‑109 (MQ=255) cTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctg < 1:1773496‑M1/150‑110 (MQ=255) tATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgattttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaa < 2:1390304‑M1/150‑113 (MQ=255) tATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGTACTATg > 2:4432387/1‑150 (MQ=255) tCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagc > 2:5777121‑M1/1‑36 (MQ=255) tCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagc < 1:992356‑M1/150‑115 (MQ=255) tCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacgtcgttaagtgcctggaagc > 1:4665540‑M1/1‑36 (MQ=255) gCCGACTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatcc < 2:4766055‑M1/150‑121 (MQ=255) cTATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaac > 1:4488644‑M1/1‑25 (MQ=255) tATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaatactatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaaca < 2:4043198‑M1/150‑127 (MQ=255) tATCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaaca < 2:345425‑M1/150‑127 (MQ=255) aTCGAAAACCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaacag > 2:5691114‑M1/1‑23 (MQ=255) aaaaCCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaacagttcc > 2:1487485‑M1/1‑19 (MQ=255) aaaaCCTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaacagttcc < 1:4333613‑M1/150‑132 (MQ=255) aaaaCCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTc < 2:2728865/150‑1 (MQ=255) aaaaCCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTc < 1:6006900/150‑1 (MQ=255) cTGAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaacagttcccggag > 1:3988613‑M1/1‑14 (MQ=255) gAAGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaacagttcccggattt < 2:3932134‑M1/150‑139 (MQ=255) aGCTGATGATggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaacagttcccggattttg < 2:760523‑M1/150‑141 (MQ=255) gatgatggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaacagttcccggattttggccc > 1:2907289‑M1/1‑6 (MQ=255) atgatggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaacagttcccggattttggccca < 2:2364572‑M1/150‑146 (MQ=255) tgatggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaacagttcccggattttggcccac > 1:808963‑M1/1‑4 (MQ=255) tgatggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaacagttcccggattttggcccac < 2:5040056‑M1/150‑147 (MQ=255) tgatggatatcttcgtttttgataccagcgatttgaccgacgccctgtttgaagcgcgcctgaataatatgctgtcgcgccgcgatcacctggaaaacttcgttaagagcctggaagctaatccgaaacagttcccggattttggcccac > 2:4101864‑M1/1‑4 (MQ=255) | CCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATA > CP009273/365843‑366139 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |