Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,222,6690TA24.6% 449.8 / 63.0 233intergenic (+125/+248)yohP/dusCuncharacterized protein/tRNA‑dihydrouridine synthase C
Reads supporting (aligned to +/- strand):  ref base T (55/120);  new base A (56/1);  total (112/121)
Fisher's exact test for biased strand distribution p-value = 2.61e-21
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 237 total aligned reads displayed.

TGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGC  >  CP009273/2222520‑2222819
                                                                                                                                                       |                                                                                                                                                      
tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCTCTCCTGTCATGTGCATTGCTTCATATAATCACGGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCCATc                                                                                                                                                       >  2:839553/1‑151 (MQ=255)
   cGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAAcgcc                                                                                                                                                    >  2:3221585/1‑151 (MQ=255)
    gTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGGTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CC‑GGGGGGGGCCCAGcgccc                                                                                                                                                   >  1:5608088/1‑150 (MQ=255)
         tAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CG‑GGGGGCGGGCAAACgccgccgcc                                                                                                                                              >  1:4197499/1‑151 (MQ=255)
         tAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CC‑CGGGGCGGCCCATCcccgccgcc                                                                                                                                              >  2:6062977/1‑151 (MQ=255)
         tAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCgccgccgcc                                                                                                                                              <  1:3209217/151‑1 (MQ=255)
           aGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAAACCCGCCGcccc                                                                                                                                            >  1:2558996/1‑151 (MQ=255)
             atgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GA‑CGGGGCGGCCCAACccccccccccccc                                                                                                                                          >  1:2139822/1‑150 (MQ=255)
             atgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGGGGCCAATCGCCGCCGccccca                                                                                                                                          >  2:1902598/1‑150 (MQ=255)
                atatTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CC‑GGGGGCGGCCCATCGGCGCCGCCCCCGGCa                                                                                                                                       >  2:4216414/1‑151 (MQ=255)
                 tatTTTAATTTTACGTAATGTCTTCAGGTCCGAATCTAACGAGCAGATTTCAGTGTCTCATCCTGTAGCGCGCATGTCTTGTGCATTGCATCCTATATTCACTGGAGCTAGGAGCGCG‑CA‑GGGGGCGGCCAATGGCCGCCGCCCCGTGCAc                                                                                                                                      <  2:4095507/151‑1 (MQ=19)
                   ttttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCCTCTAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCGGCcccc                                                                                                                                    >  2:4990880/1‑151 (MQ=255)
                   ttttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAACGCCCCCCCCCCCAGCAccc                                                                                                                                    >  2:278776/1‑151 (MQ=255)
                   ttttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGGCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GACGGGGGGGGCCAAAC‑CCGccccccccacccccc                                                                                                                                    >  1:5335672/1‑144 (MQ=255)
                    tttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCAcccc                                                                                                                                   <  2:591080/151‑1 (MQ=255)
                     ttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCAccccc                                                                                                                                  <  2:1051791/151‑1 (MQ=255)
                      tAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CC‑GGGGGGGGCCCAAAGCCCCCCCCCCCAGCAcccccc                                                                                                                                 >  1:3896712/1‑150 (MQ=255)
                      tAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAACGCCGCCGCCCCCAGCACCCCCg                                                                                                                                 >  2:1764612/1‑151 (MQ=255)
                      tAAAAATAAATAACGTCATCAGGTCCGAAAATAACGAGAAACTTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCg                                                                                                                                 <  2:4845293/151‑1 (MQ=255)
                       aaaaTTCATGACTGTCATCAGGTCCGAAAAGAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCgg                                                                                                                                <  2:4284139/151‑1 (MQ=255)
                        aaaTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CG‑GGGGGGGGGCCAAAGCCGCCCCCCCCCGCAcccccccg                                                                                                                               >  1:4334527/1‑148 (MQ=38)
                        aaaTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGGCGCCCAACGCCGCCCCCCCCAGCCCCCCCggg                                                                                                                               >  2:6030013/1‑151 (MQ=38)
                        aaaTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCCAAAGCCGCCGCCCCCCCCAaccccccg                                                                                                                               >  1:1152357/1‑148 (MQ=38)
                         aattaattAATGTCATCAGGTCCGAAAATAACGGGAATATTTCATTCTCTCATCCTGTTGCGCTCCTGGCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGAGGCCAAAAGCCGCCGCCCCCGGCACCCCCGGGc                                                                                                                              >  2:5743093/1‑151 (MQ=37)
                         aattaattAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAAAGCCGCCGCCCCCGGCACCCCCCGGc                                                                                                                              >  2:1642022/1‑151 (MQ=255)
                          actaattaagGTCATCAGGTCCGACAATAACGAGTATAGTACAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGAGct                                                                                                                             <  1:1012103/149‑1 (MQ=25)
                           ttaattaaTGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CC‑GGGGGCGGCCCAAACCCGCCGCCCCCCGCACCCCCCGGcgc                                                                                                                            >  1:5775563/1‑149 (MQ=255)
                           ttaattaaTGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGGCAAAAGCCCCCCCCCCCCGCACCCCCCGGcgc                                                                                                                            >  1:369425/1‑149 (MQ=37)
                            taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGctct                                                                                                                           <  1:4299597/151‑1 (MQ=255)
                             aattaatGTCATCAGGTCCGACAATAACGAGACTATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATACTCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTg                                                                                                                          <  2:1010919/151‑1 (MQ=255)
                               ttaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCCC‑GGGGGGGGCCAAAGCCCCCCCCCCCCGCCACCCCCggctcgggc                                                                                                                         >  1:2754997/1‑144 (MQ=255)
                               ttaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGc                                                                                                                        <  2:1341243/151‑1 (MQ=255)
                                 aatGTCATCAGGTCCTAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGa                                                                                                                      <  1:6017886/151‑1 (MQ=255)
                                      catcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGGGGCCAAACGCCGCCCCCCCCAGCACCCCCCGGCTCAGGCGAACaaa                                                                                                                 >  1:418955/1‑151 (MQ=25)
                                        tcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCACATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAAt                                                                                                               <  2:2167730/151‑1 (MQ=255)
                                         caGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATc                                                                                                              <  1:5757365/151‑1 (MQ=255)
                                          aGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GA‑GGGGGCGGCCCAACGCCCCCCCCCCCAGCACCCCCCCGCACAGGCGAAACAAAtaa                                                                                                             >  1:2013358/1‑149 (MQ=255)
                                            gTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATcgcc                                                                                                           <  1:725381/151‑1 (MQ=255)
                                               cGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GC‑GGGGGCGGCCAATCGCCGCCGCCCCCAGCACCCCCCGGCTCTGGCGCACACGATcgccgcg                                                                                                        >  2:4539443/1‑150 (MQ=25)
                                                taaaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTg                                                                                                       <  1:778480/150‑1 (MQ=255)
                                                gAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GA‑GGGGGCGGCCAAAAGCCGCCCCCCCCAGCACCCCCCGGCGAAGGCGAACAAAATcgccgcag                                                                                                       >  2:2610180/1‑149 (MQ=255)
                                                gAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCATCACCCACGGGCGAGGGGCAACAACATcgccccgt                                                                                                       >  2:1397763/1‑147 (MQ=25)
                                                gAAAATAACGAGAATATCTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCCAAAGCCCCCCCCCCCCCCACCCCCCCGCACAGGCGAACAAAAAcgcccccg                                                                                                       >  1:6244200/1‑147 (MQ=21)
                                                 aaaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgc                                                                                                      <  2:5350168/151‑1 (MQ=255)
                                                  aaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgcg                                                                                                     <  2:490982/151‑1 (MQ=255)
                                                  aaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgcg                                                                                                     <  1:2179930/151‑1 (MQ=255)
                                                    aTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGcgcg                                                                                                   <  1:6196712/151‑1 (MQ=255)
                                                       aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTg                                                                                                <  1:4256073/151‑1 (MQ=255)
                                                       aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATAAAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTg                                                                                                <  1:29532/151‑1 (MQ=255)
                                                            aaTATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑CGGGGCGGCCCAACACCCCCCCCCCCAGCACCCCCCCGCACTGGCGCACAAAAACGCCCCGGCGCCGTGgccac                                                                                           >  1:4138673/1‑149 (MQ=21)
                                                             atatTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCg                                                                                          <  1:1882453/151‑1 (MQ=255)
                                                              tatTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCgg                                                                                         <  2:242045/151‑1 (MQ=255)
                                                              tatTTCAGTCTCTCATCCTGTAGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTTGCGCAAGGAGCGCG‑GA‑TGGGGCGGCCCAAAGCCCCCCCCCCCAGCACCCCCCGGCTCTGGCGAACCAAATCCCCGCGGCGCGGGGGCCTCgg                                                                                         >  2:2728251/1‑151 (MQ=255)
                                                                   cAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATACTCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTAt                                                                                    <  2:117710/151‑1 (MQ=255)
                                                                   cAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTAt                                                                                    <  2:3775235/151‑1 (MQ=255)
                                                                     gTCTCTCATCCTGTTGCGCTCCTGACATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATcc                                                                                  <  1:340275/151‑1 (MQ=255)
                                                                        tctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCGCTGGCGCACAAAAACGCCGCTGCGCCGTGCCCTCGGCTTATaccat                                                                               >  2:6281144/1‑149 (MQ=18)
                                                                           cATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAAAGCCGCCGCCCCCAGCCCCCCCGGGCTCAGGCGAACAAAATAGCCGCGGCGCGGTGCCCACGGCTGATCCCATACg                                                                            >  2:2517879/1‑151 (MQ=18)
                                                                             tCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGc                                                                          <  1:498716/151‑1 (MQ=255)
                                                                              ccTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GA‑CGGGGCGGCCAAACGCCCCCCCCCCCAGCACCCCCCGGCTCAGGCGCACAAAATAGCCCCAGCGCGGTGCCCACGGCGTATACCAGACGGCt                                                                         >  2:4485248/1‑151 (MQ=255)
                                                                                tGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTAc                                                                       <  1:929089/151‑1 (MQ=255)
                                                                                  ttGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCg                                                                     <  1:2528536/151‑1 (MQ=255)
                                                                                   tGCGCTCCTGTCATGTGCATTGCTTCATATATTCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCgg                                                                    <  1:5153475/151‑1 (MQ=255)
                                                                                     cgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GA‑GGGGGCGGCCAATCGCCGCCCCCCCCAGCACCCCCCGGCGCTGGCGAAAAAAATCGCCGCTGCGCGGTGCCCACGGCTTATCCCATAAGGCTACCGGGt                                                                  >  2:3509024/1‑151 (MQ=17)
                                                                                     cgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGt                                                                  <  2:4648476/151‑1 (MQ=255)
                                                                                     cgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGt                                                                  <  2:5589029/151‑1 (MQ=255)
                                                                                      gcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTc                                                                 <  2:3117907/151‑1 (MQ=255)
                                                                                        tCCTGTCATGTGCATTGCTTCATCTAATCACTGGCGCAAGGAGCGCG‑CA‑TGGGGCGGCCAAACGCCACCCCCCCCAACACCCCCGGGCACAGGCCAAAAAAAAACCCACGGAGCGGGTCCCTCGGCATATACATTTCGGCAACCGGGTggg                                                               >  2:284166/1‑151 (MQ=12)
                                                                                        tCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCgg                                                               <  2:5324258/151‑1 (MQ=255)
                                                                                                 gtgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGCGGCGattg                                                      <  2:6060788/151‑4 (MQ=255)
                                                                                                  tgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTa                                                     <  2:3338997/151‑1 (MQ=255)
                                                                                                  tgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTa                                                     <  1:3648397/151‑1 (MQ=255)
                                                                                                     aTTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCGACCGGGTCGGGCGCGAGGTAACa                                                  <  2:520000/151‑1 (MQ=255)
                                                                                                        gCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAAACCCCCCGCCCCCAGCACCCCCCGGCACAGGCGAAAAAAAAAGCCCCGGCGCGGTGCCCACGGCTTATACCAAAACGCAACCCGGTAGGGCGCGAGGTaaaaacc                                               >  2:6234680/1‑146 (MQ=9)
                                                                                                         cTTCATATAATCACTGGCGCAAGGAGCGCG‑GC‑GGGGGCGGCCCAAAGCCGCCGCCCCCAGCACCCCCCGGCTATGGCGTAAAAAATAGCCGGGGCGCGGTGGCCTCGGCTTATCCCATTCGGGTACCGGGTCGGGGGGGCGGTAAAATccc                                              >  2:1500946/1‑151 (MQ=255)
                                                                                                         cTTCATAGAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAACGCCGCCGCCCCCAGCACCCCCCCGCTCTTGCGAACAAAATCCCCGCAGCGCGGTGCCCACGGCGTTTACCAGACAGCTACCCGGTCGGGCGCGTGGGCACATacc                                              >  2:1557677/1‑151 (MQ=2)
                                                                                                          ttCATATACACACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt                                             <  1:1607941/151‑1 (MQ=21)
                                                                                                          ttCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt                                             <  1:151497/151‑1 (MQ=39)
                                                                                                            cATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGt                                           <  2:688197/151‑1 (MQ=38)
                                                                                                              tataATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTaa                                         <  1:1790364/151‑1 (MQ=35)
                                                                                                               ataATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCCGGCAAAAGCCCCCGCCCCCACCACCCCCCGGCGCAGGCGAACAAAAACGCCCCAGCGCGGGGGCCACGGCGTATGCCATAACGCGACCCGGTGGGGCGGGAGGGAACAAACCAGTaaa                                        >  2:2262341/1‑151 (MQ=2)
                                                                                                                 aaTCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAc                                      <  1:2013111/151‑1 (MQ=33)
                                                                                                                    cACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAcgcg                                   <  2:318640/151‑1 (MQ=31)
                                                                                                                    cACTGGCGCAAGGAGCGCG‑CA‑CGGGGCGGCCCAAAGCCCCCCCCCCCAGCACCCCCGGGCGCTTGCGCACAAAATAGCCGCGGGGCGGGGCCCACGGCGTATACCATACGGCGACCCGGGCGGGCGCGAGGGCACATACCGGTAAAAcgcc                                   >  2:4306598/1‑150 (MQ=2)
                                                                                                                     aCTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACgcgc                                  <  2:675539/151‑1 (MQ=31)
                                                                                                                           gcAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAg                            <  2:3822872/151‑1 (MQ=31)
                                                                                                                            cAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCGGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGc                           <  2:1478377/151‑1 (MQ=14)
                                                                                                                             aaGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc                          <  1:566919/151‑1 (MQ=31)
                                                                                                                                 aGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                      <  1:4806072/151‑1 (MQ=31)
                                                                                                                                      g‑cA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATACCTGTAAAACGCGCCCTCAGCCCACATCCAt                 >  1:2340513/1‑151 (MQ=14)
                                                                                                                                        gccgggggCGGCCTATCGCCGCCGCCCCCCGCACCCCCCCGCTCTGCCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCGTACGGCTCCCGGGTCGGGCGCGAGGGACCATCCCTGTAAAACGCGCCCTCAGCCCACCTCCAt                 <  2:53891/148‑1 (MQ=11)
                                                                                                                                           gggggCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtgtg              <  2:4432423/151‑1 (MQ=31)
                                                                                                                                           gggggCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtgtg              >  1:1370012/1‑151 (MQ=31)
                                                                                                                                           gggggCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtgtg              <  1:6134505/151‑1 (MQ=31)
                                                                                                                                            ggggCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTgg             <  1:3047070/151‑1 (MQ=31)
                                                                                                                                               gcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCt          <  1:5421628/151‑1 (MQ=31)
                                                                                                                                                 ggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGTTCGGGCGCGAGGTGACATGCCTGTAAATCGCGCCCTCAGCCCTCATCCATGTGGGCTGc        >  2:2975093/1‑151 (MQ=255)
                                                                                                                                                   ccAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGccc      >  1:4691342/1‑151 (MQ=31)
                                                                                                                                                   ccAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGccc      >  2:4072294/1‑151 (MQ=31)
                                                                                                                                                    cAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGcccc     >  2:2036223/1‑151 (MQ=31)
                                                                                                                                                       |                                                                                                                                                      
TGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGC  >  CP009273/2222520‑2222819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑