Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,222,6830TA23.4% 489.4 / 50.5 233intergenic (+139/+234)yohP/dusCuncharacterized protein/tRNA‑dihydrouridine synthase C
Reads supporting (aligned to +/- strand):  ref base T (38/126);  new base A (49/1);  total (105/128)
Fisher's exact test for biased strand distribution p-value = 3.92e-23
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 236 total aligned reads displayed.

ATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCC  >  CP009273/2222533‑2222833
                                                                                                                                                        |                                                                                                                                                      
   atatTTTACAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCGTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGGGG‑CCCATCGCCGCCGCCCCCCGCa                                                                                                                                                     >  2:1374216/1‑151 (MQ=255)
   atatTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAAAACCCCCCCCCCCCAGCa                                                                                                                                                     >  1:3101975/1‑151 (MQ=38)
    tatTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GGGGGGGCGG‑CCCATAGCCCCCCCCCCCAGccc                                                                                                                                                    >  1:5350078/1‑149 (MQ=255)
    tatTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCAc                                                                                                                                                    <  1:3418901/151‑1 (MQ=255)
     atTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCAcc                                                                                                                                                   >  2:4105654/1‑151 (MQ=255)
      ttttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCCTCTAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCGGCcccc                                                                                                                                                  >  2:4990880/1‑151 (MQ=255)
       tttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCCCCGCCGCCCCCAGCAcccc                                                                                                                                                 >  2:1024388/1‑151 (MQ=255)
         tAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCg                                                                                                                                               <  1:6242469/151‑1 (MQ=255)
         tAAAAATAAATAACGTCATCAGGTCCGAAAATAACGAGAAACTTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCg                                                                                                                                               <  2:4845293/151‑1 (MQ=255)
           aaaTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CGGGGGGGGG‑GCCAAAGCCGCCCCCCCCCGCAcccccccg                                                                                                                                             >  1:4334527/1‑148 (MQ=38)
           aaaTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCCAAAGCCGCCGCCCCCCCCAaccccccg                                                                                                                                             >  1:1152357/1‑148 (MQ=38)
             actaattaagGTCATCAGGTCCGACAATAACGAGTATAGTACAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGAGct                                                                                                                                           <  1:1012103/149‑1 (MQ=25)
              ttaattaaTGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GCGGGGGGGG‑CCCAAAGCCCCCGCCCCCCGCACCCCCCGGcgc                                                                                                                                          >  1:3300359/1‑149 (MQ=255)
               taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGctct                                                                                                                                         <  2:2145639/151‑1 (MQ=255)
               taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGctct                                                                                                                                         <  1:4299597/151‑1 (MQ=255)
                aattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GAGGGGGGGG‑CCAATCGCCGCCGCCCCCAGCCCCCCCGGGCTCTg                                                                                                                                        >  2:1225624/1‑151 (MQ=255)
                 attaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCACCTGCACCCCCGGGCTCTgg                                                                                                                                       <  1:4596786/151‑1 (MQ=255)
                  ttaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCCCGGGGGGGG‑CCAAAGCCCCCCCCCCCCGCCACCCCCggctcgggc                                                                                                                                       >  1:2754997/1‑144 (MQ=255)
                  ttaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGc                                                                                                                                      <  1:857733/151‑1 (MQ=255)
                    aatGTCATCAGGTCCTAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGa                                                                                                                                    <  1:6017886/151‑1 (MQ=255)
                       gTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAAAAGCCGCCGCCCCCAGCACCCCCCGGCTCAGGCGAACa                                                                                                                                 >  1:4185040/1‑151 (MQ=255)
                         catcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATAGCCCCCCCCCCCCGCACCCCCCGGCACAGGGGAACaaa                                                                                                                               >  1:418963/1‑151 (MQ=25)
                         catcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCGGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACcaa                                                                                                                               <  2:2450309/151‑1 (MQ=255)
                          atcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CGGGGGGGGG‑CCCAACGCCGCCGCCCCCACCCCCCCCCGGCGCGGGCGAACaaaa                                                                                                                              >  1:3864206/1‑151 (MQ=255)
                           tcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAAt                                                                                                                             <  1:3949476/151‑1 (MQ=255)
                            caGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATc                                                                                                                            <  1:5757365/151‑1 (MQ=255)
                             aGGTCCGAAACTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCCCTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATcg                                                                                                                           <  1:4703356/151‑1 (MQ=255)
                             aGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCGCAGGCGAACCAAATcg                                                                                                                           >  2:6179717/1‑151 (MQ=255)
                               gTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATcgcc                                                                                                                         <  2:798111/151‑1 (MQ=255)
                                  cGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GCGGGGGCGG‑CCAATCGCCGCCGCCCCCAGCACCCCCCGGCTCTGGCGCACACGATcgccgcg                                                                                                                      >  2:4539443/1‑150 (MQ=25)
                                   gAAAATAACTAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCAATGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCCG‑CCAAAACCCCCCGACCCCTGCCCCCCCCGGCAAAGTCGAACAAAATaaccgcag                                                                                                                     >  2:329601/1‑149 (MQ=21)
                                   gAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CCGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTg                                                                                                                     <  1:777694/151‑1 (MQ=255)
                                    aaaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgc                                                                                                                    <  2:5350168/151‑1 (MQ=255)
                                     aaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgcg                                                                                                                   <  1:2179930/151‑1 (MQ=255)
                                     aaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgcg                                                                                                                   <  2:490982/151‑1 (MQ=255)
                                       aTAACGAGAATCTTTCAGTCTCTCCTCCTGTTGCGCTCCTGTCAGGTGCATTGCTTCATATAATCACTGGCGCATGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGcgcg                                                                                                                 <  2:1110650/151‑1 (MQ=255)
                                         aaCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTACATATAATCACGGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGt                                                                                                               <  1:1374309/151‑1 (MQ=255)
                                         aaCGAGAATATTACAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGt                                                                                                               <  1:6194924/151‑1 (MQ=255)
                                          aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTg                                                                                                              <  1:4256073/151‑1 (MQ=255)
                                          aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATAAAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTg                                                                                                              <  1:29532/151‑1 (MQ=255)
                                             agaAAATTTCAGTCTCTCAGCCTGTTGCGCTCCTGTCATGAGCATTGCTTCATAAAATCACTGACGCAAGGAGCTCG‑AAGGGGGAGG‑CCAAACGCCCCCACCCCCAGCCCCCCCCGGGTCAGGCGCACAAAAAAACCGCAGCGCGGTTccc                                                                                                           >  2:1615843/1‑151 (MQ=255)
                                                atatTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCg                                                                                                        <  1:1882453/151‑1 (MQ=255)
                                                 tatTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GCGGGGGCGG‑CCAATAGCCCCCCCCCCCAGCCACCCCCGGCACTGGCGAAAAAAAAAGCCGCGGCGCGGTGgccaccg                                                                                                       >  2:4239143/1‑147 (MQ=255)
                                                 tatTTCAGTCTCTCATCCTGTAGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTTGCGCAAGGAGCGCG‑GATGGGGCGG‑CCCAAAGCCCCCCCCCCCAGCACCCCCCGGCTCTGGCGAACCAAATCCCCGCGGCGCGGGGGCCTCgg                                                                                                       >  2:2728251/1‑151 (MQ=255)
                                                   tttCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAAACGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGAACAAAATAGCCGGTTCGGGGTGCCCTCGGCt                                                                                                     >  2:4296526/1‑151 (MQ=18)
                                                      cAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTAt                                                                                                  <  2:3775235/151‑1 (MQ=255)
                                                      cAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATAGCCGCCCCCCCCAGCACCCCCCGGCTCAGGCGAACAAAAACACCGCTGCGCGGTGCCCACGGCTTAt                                                                                                  >  2:3852086/1‑151 (MQ=18)
                                                           tctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCGCTGGCGCACAAAAACGCCGCTGCGCCGTGCCCTCGGCTTATaccat                                                                                             >  2:6281144/1‑149 (MQ=18)
                                                             tcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTAc                                                                                           <  2:167143/151‑1 (MQ=255)
                                                              cATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAAAAGCCGCCGCCCCCAGCCCCCCCGGGCTCAGGCGAACAAAATAGCCGCGGCGCGGTGCCCACGGCTGATCCCATACg                                                                                          >  2:2517879/1‑151 (MQ=18)
                                                                tCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGc                                                                                        <  1:498716/151‑1 (MQ=255)
                                                                  cTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCAGCACCCCCCGGCTCAGGCGAACAAAAACGCCGCGGCGCGGTGCCCACGGCATAACCCATACGGCTa                                                                                      >  2:4707146/1‑151 (MQ=17)
                                                                   tGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTAc                                                                                     <  1:929089/151‑1 (MQ=255)
                                                                     ttGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCg                                                                                   <  1:2528536/151‑1 (MQ=255)
                                                                      tGCGCTCCTGTCATGTGCATTGCTTCAAATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCgg                                                                                  <  1:63543/151‑1 (MQ=255)
                                                                       gcgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCATGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCggg                                                                                 <  1:5919553/151‑1 (MQ=255)
                                                                         gcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTc                                                                               <  2:3117907/151‑1 (MQ=255)
                                                                           tCCTGTCATGTGCATTGCTTCATCTAATCACTGGCGCAAGGAGCGCG‑CATGGGGCGG‑CCAAACGCCACCCCCCCCAACACCCCCGGGCACAGGCCAAAAAAAAACCCACGGAGCGGGTCCCTCGGCATATACATTTCGGCAACCGGGTggg                                                                             >  2:284166/1‑151 (MQ=12)
                                                                           tCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCgg                                                                             <  2:5324258/151‑1 (MQ=255)
                                                                              tGTCATGTGCAGTGCTTCATATAATCACGGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgcg                                                                          <  2:4477920/151‑1 (MQ=255)
                                                                               gTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGGCCCAAACGCC‑CCCCCCCCACCCCCCCCCGGCACAGGCCAACAAAAACCCCCCGGCGCCGTGGCCACGGCCGATACCATACGGCAACCGGGGCGGgggc                                                                         >  2:2225903/1‑151 (MQ=12)
                                                                                    gtgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGCGGCGattg                                                                    <  2:6060788/151‑4 (MQ=255)
                                                                                            cTTCATATAATCACTGGCGCAAGGAGCGCG‑GCGGGGGCGG‑CCCAAAGCCGCCGCCCCCAGCACCCCCCGGCTATGGCGTAAAAAATAGCCGGGGCGCGGTGGCCTCGGCTTATCCCATTCGGGTACCGGGTCGGGGGGGCGGTAAAATccc                                                            >  2:1500946/1‑151 (MQ=255)
                                                                                             ttCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt                                                           <  1:1607924/151‑1 (MQ=39)
                                                                                              tCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCGTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTg                                                          <  2:5655622/151‑1 (MQ=38)
                                                                                               cATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGt                                                         <  2:688196/151‑1 (MQ=38)
                                                                                                atatAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTa                                                        <  2:2782708/151‑1 (MQ=37)
                                                                                                 tataATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTaa                                                       <  1:1790364/151‑1 (MQ=35)
                                                                                                    aaTCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAc                                                    <  1:2013111/151‑1 (MQ=33)
                                                                                                               cAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCGGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGc                                         <  2:1478377/151‑1 (MQ=14)
                                                                                                                aaGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc                                        <  1:566919/151‑1 (MQ=31)
                                                                                                                        cg‑cAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCa                                <  1:1246033/151‑1 (MQ=31)
                                                                                                                         g‑cAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATACCTGTAAAACGCGCCCTCAGCCCACATCCAt                               >  1:2340513/1‑151 (MQ=14)
                                                                                                                          gccgggggCGG‑CCTATCGCCGCCGCCCCCCGCACCCCCCCGCTCTGCCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCGTACGGCTCCCGGGTCGGGCGCGAGGGACCATCCCTGTAAAACGCGCCCTCAGCCCACCTCCAt                               <  2:53891/148‑1 (MQ=11)
                                                                                                                            aGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtgt                             >  1:2672842/1‑151 (MQ=31)
                                                                                                                            aGGGGGCGG‑CCAAACGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAACCGCGCCCTCAGCCCACATCCAtgt                             <  2:5926161/151‑1 (MQ=14)
                                                                                                                                 gcgg‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCt                        <  1:5421628/151‑1 (MQ=31)
                                                                                                                                  cgg‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAACCGCGCCCTCAGCCCACATCCATGTGGGCTg                       <  2:4311191/151‑1 (MQ=14)
                                                                                                                                  cgg‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTg                       >  1:5162053/1‑151 (MQ=31)
                                                                                                                                   gg‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGTTCGGGCGCGAGGTGACATGCCTGTAAATCGCGCCCTCAGCCCTCATCCATGTGGGCTGc                      >  2:2975093/1‑151 (MQ=255)
                                                                                                                                      ccAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTAAGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGccc                    >  2:4072330/1‑151 (MQ=14)
                                                                                                                                       cAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGcccc                   >  2:2036223/1‑151 (MQ=31)
                                                                                                                                       cAATCGCCGCCGCCCCCGGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTACAACGCGCCCTCAGCCCTCCTCCGTGTGGGCTGcccc                   >  2:3369585/1‑151 (MQ=255)
                                                                                                                                          tCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGc                >  1:2036089/1‑151 (MQ=31)
                                                                                                                                          tCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGc                >  1:3659107/1‑151 (MQ=31)
                                                                                                                                            gccgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCt              >  2:674478/1‑151 (MQ=31)
                                                                                                                                            gccgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCt              >  2:5818661/1‑151 (MQ=31)
                                                                                                                                              cgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTCACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTc            >  2:3795326/1‑151 (MQ=14)
                                                                                                                                              cgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTc            <  1:2072921/151‑1 (MQ=31)
                                                                                                                                              cgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTc            >  1:507260/1‑151 (MQ=31)
                                                                                                                                               gccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCa           >  2:5674479/1‑151 (MQ=31)
                                                                                                                                                 cgccCGCTGCACCGCCGGGCTGTGGCGATCAATATCGCCGCTGCGCGGTGCGCTCGGCTTATCCCTTTCGGCTACCGGGTCGGGCGCGAGGTATCTTCCCTGTAAAACGCGCCCTCTGCCGACATGCTTGTGGGCTGCCCCGGCCTTCAgg         <  2:3591872/151‑1 (MQ=11)
                                                                                                                                                 cgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAgg         >  1:4860168/1‑151 (MQ=31)
                                                                                                                                                   cccccTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCGACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGa       <  2:5987385/151‑1 (MQ=14)
                                                                                                                                                    ccccTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGaa      >  1:1490956/1‑151 (MQ=31)
                                                                                                                                                     cccTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAAc     <  1:4555817/151‑1 (MQ=31)
                                                                                                                                                     cccTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAAc     >  2:5101753/1‑151 (MQ=31)
                                                                                                                                                     cccTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAAc     <  2:2395605/151‑1 (MQ=31)
                                                                                                                                                       cTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACAt                                                               <  2:4521779/91‑1 (MQ=33)
                                                                                                                                                        tGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGcc  >  2:1787399/1‑151 (MQ=31)
                                                                                                                                                        |                                                                                                                                                      
ATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCC  >  CP009273/2222533‑2222833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑