Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 3,363,709 T→C M1M (ATG→GTG) †
L229L (CTA→CTG
nanK ←
nanE ←
N‑acetylmannosamine kinase
putative N‑acetylmannosamine‑6‑P epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,363,7090TC100.0% 1640.5 / NA 386M1M (ATG→GTG) †
L229L (CTA→CTG
nanK
nanE
N‑acetylmannosamine kinase
putative N‑acetylmannosamine‑6‑P epimerase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (208/178);  total (208/178)

Only 100 of 386 total aligned reads displayed.

GAGACTAATGCGGATAAGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCATAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGCCCTTCGGCAATCACC  >  CP009273/3363561‑3363856
                                                                                                                                                    |                                                                                                                                                   
  gaCTAATGCGGATAAGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCa                                                                                                                                                 >  1:4110504/1‑151 (MQ=255)
       aTGCGGATAAGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGcc                                                                                                                                            <  2:3102504/151‑1 (MQ=255)
       aTGCGGATAAGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGcc                                                                                                                                            >  1:5396145/1‑151 (MQ=255)
         gCGGATAAGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCtt                                                                                                                                          >  2:4947708/1‑151 (MQ=255)
         gCGGATAAGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCtt                                                                                                                                          <  1:2205088/151‑1 (MQ=255)
             aTAAGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTc                                                                                                                                      >  2:42736/1‑151 (MQ=255)
             aTAAGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTc                                                                                                                                      >  1:4864608/1‑151 (MQ=255)
              ttagtcttCACGCAAGGCTTCTTGTGTGTGGCTGGCTGGCGTAGGTAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCATTTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACTGCCACGGCTTTTTCa                                                                                                                                     <  2:589386/144‑1 (MQ=255)
              tAAGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCa                                                                                                                                     >  2:6270039/1‑151 (MQ=255)
              tAAGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCa                                                                                                                                     >  1:5170323/1‑151 (MQ=255)
                aGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATc                                                                                                                                   >  2:4735854/1‑151 (MQ=255)
                 ggCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCg                                                                                                                                  <  1:3484721/151‑1 (MQ=255)
                  gCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGc                                                                                                                                 <  1:2611339/151‑1 (MQ=255)
                  gCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGc                                                                                                                                 >  1:2126815/1‑151 (MQ=255)
                   cATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCt                                                                                                                                >  1:2487917/1‑151 (MQ=255)
                   cATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCt                                                                                                                                >  1:3134797/1‑151 (MQ=255)
                    aTCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCtg                                                                                                                               >  2:4599699/1‑151 (MQ=255)
                      cACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCtgtg                                                                                                                             <  1:23177/151‑1 (MQ=255)
                       aCGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTgtgt                                                                                                                            >  2:2587620/1‑151 (MQ=255)
                        cGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGtgtt                                                                                                                           <  2:4521484/151‑1 (MQ=255)
                        cGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGtgtt                                                                                                                           >  1:639455/1‑151 (MQ=255)
                        cGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGGACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGtgtt                                                                                                                           <  2:1371255/151‑1 (MQ=255)
                         gCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCTCCGCCTTTTTCATCGCTgggtgg                                                                                                                          >  2:1529862/1‑149 (MQ=255)
                         gCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGtgttg                                                                                                                          <  1:4915508/151‑1 (MQ=255)
                           aaGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTa                                                                                                                        >  2:5302687/1‑151 (MQ=255)
                                ttCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACt                                                                                                                   >  1:2876829/1‑151 (MQ=255)
                                ttCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACt                                                                                                                   >  1:5907199/1‑151 (MQ=255)
                                ttCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACt                                                                                                                   >  1:4038975/1‑151 (MQ=255)
                                        tCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAAtg                                                                                                           <  1:3615690/151‑1 (MQ=255)
                                            gctggctggcGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCt                                                                                                       <  1:4636056/151‑1 (MQ=255)
                                             ctggctggcGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTc                                                                                                      <  2:1255707/151‑1 (MQ=255)
                                             ctggctggcGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTc                                                                                                      >  1:2039479/1‑151 (MQ=255)
                                              tggctggcGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCa                                                                                                     >  1:786704/1‑151 (MQ=255)
                                                gctggcGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAg                                                                                                   <  2:5214678/151‑1 (MQ=255)
                                                 ctggcGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGa                                                                                                  <  1:6132343/151‑1 (MQ=255)
                                                        aGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGAGGCAAGATTAGTACCGCCTATATCAATCGCCAGTTTGTACACAGAACCGCCAATTTCATCGCTGTGTTGTACCACTGACAAATGTGCAAAAGACGCGTGa                                                                                           >  1:1925261/1‑151 (MQ=255)
                                                         ggAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGAt                                                                                          >  2:816871/1‑151 (MQ=255)
                                                          gAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGAtt                                                                                         >  2:2611525/1‑151 (MQ=255)
                                                           aaGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTg                                                                                        <  1:959428/151‑1 (MQ=255)
                                                              gtCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAg                                                                                     <  2:5184129/150‑1 (MQ=255)
                                                               tCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGa                                                                                    <  1:4357300/151‑1 (MQ=255)
                                                                    acgaTCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAaccga                                                                               >  2:2820649/1‑151 (MQ=255)
                                                                      gaTCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAaccgacc                                                                             <  1:2968656/151‑1 (MQ=255)
                                                                             gaacTGCCCGGCAGCGCCAAGCAGCGCGGCGGCACGTTTAGTCCCGCCGCTATCACTCGCCAGTCTGCTCACAGCACCGCCAATTTCCACGCGGTGCTGTACCACTGACAACGGGGCGCAAGACGCGTGATTGCAGAACCGCCCGACACCg                                                                      <  2:710147/148‑1 (MQ=255)
                                                                             gATCTGCCCGACAGCGCCACTCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCATTTTCATCGCTGTGTTGTACCACTGACAAATGTGCGCCAGACGCGTGATTGCAGAACCGACCGTCACCg                                                                      <  2:4483493/151‑1 (MQ=255)
                                                                               tCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGcc                                                                    >  1:2912653/1‑151 (MQ=255)
                                                                               tCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGcc                                                                    >  2:1581171/1‑151 (MQ=255)
                                                                                 tGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCa                                                                  >  1:4574644/1‑151 (MQ=255)
                                                                                  gCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCAc                                                                 <  1:5847980/151‑1 (MQ=255)
                                                                                  gCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCAc                                                                 >  1:6225837/1‑151 (MQ=255)
                                                                                  gCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCAc                                                                 <  2:2045389/151‑1 (MQ=255)
                                                                                    ccGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCAcgc                                                               >  2:2285764/1‑151 (MQ=255)
                                                                                    ccGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCAcgc                                                               >  2:2741685/1‑151 (MQ=255)
                                                                                     tgTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCAcgcg                                                              >  2:916192/2‑151 (MQ=255)
                                                                                     cGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCAcgcg                                                              >  2:2928747/1‑151 (MQ=255)
                                                                                      gTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACgcgc                                                             <  2:4000352/151‑1 (MQ=255)
                                                                                      gTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACgcgc                                                             >  1:1785205/1‑151 (MQ=255)
                                                                                           cgcCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTgg                                                        >  1:3338056/1‑151 (MQ=255)
                                                                                             ccAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGgcg                                                      >  1:3895189/1‑151 (MQ=255)
                                                                                                aTCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGcgcat                                                   <  2:5617460/151‑1 (MQ=255)
                                                                                                  cAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGcgcatcg                                                 <  1:1501199/151‑1 (MQ=255)
                                                                                                     cgcgGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAACTGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGcgcatcgcat                                              <  2:382185/151‑1 (MQ=255)
                                                                                                       cggcggCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATcc                                            >  2:412939/1‑151 (MQ=255)
                                                                                                        ggcggcAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATccg                                           >  2:1681727/1‑151 (MQ=255)
                                                                                                        ggcggcAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGGGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATccg                                           <  2:5459203/151‑1 (MQ=255)
                                                                                                          cggcAAGTTTAGTACCGCCGATATCACTCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATccgcc                                         <  2:2181544/151‑1 (MQ=255)
                                                                                                          cggcAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATccgcc                                         >  1:1628179/1‑151 (MQ=255)
                                                                                                          cggcAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATccgcc                                         <  2:6006071/151‑1 (MQ=255)
                                                                                                            gcAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCcgccgc                                       >  1:5486589/1‑151 (MQ=255)
                                                                                                              aaGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCt                                     >  2:618377/1‑151 (MQ=255)
                                                                                                              aaGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCt                                     >  1:6054699/1‑151 (MQ=255)
                                                                                                                gTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGa                                   >  1:3061008/1‑151 (MQ=255)
                                                                                                                 tttAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAg                                  >  2:2558389/1‑151 (MQ=255)
                                                                                                                 tttAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAg                                  >  1:703563/1‑151 (MQ=255)
                                                                                                                  ttAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGc                                 >  1:5540876/1‑151 (MQ=255)
                                                                                                                  ttAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGc                                 >  2:3627669/1‑151 (MQ=255)
                                                                                                                   tAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCa                                <  1:2654979/151‑1 (MQ=255)
                                                                                                                   tAGTACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCa                                <  2:1304105/151‑1 (MQ=255)
                                                                                                                      tACCGCCGATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGc                             >  2:2429450/1‑151 (MQ=255)
                                                                                                                           ccgATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGtgtt                        <  1:918312/151‑1 (MQ=255)
                                                                                                                           ccgATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGtgtt                        <  1:4232236/151‑1 (MQ=255)
                                                                                                                           ccgATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGtgtt                        >  2:3341872/1‑151 (MQ=255)
                                                                                                                           ccgATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGtgtt                        <  1:5756554/151‑1 (MQ=255)
                                                                                                                            cgATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGtgttg                       <  2:646497/151‑1 (MQ=255)
                                                                                                                             gATATCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGtgttgt                      >  2:3862684/1‑151 (MQ=255)
                                                                                                                              atatCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTa                     <  1:1209037/151‑1 (MQ=255)
                                                                                                                               tatCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTaa                    >  1:3528485/1‑151 (MQ=255)
                                                                                                                                atCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAAc                   <  2:5071925/151‑1 (MQ=255)
                                                                                                                                 tCAATCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACg                  >  1:243762/1‑151 (MQ=255)
                                                                                                                                   aaTCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGACCCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGcc                >  2:4470166/1‑151 (MQ=255)
                                                                                                                                   aaTCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGcc                >  1:3725215/1‑151 (MQ=255)
                                                                                                                                   aaTCGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGcc                >  2:3430414/1‑151 (MQ=255)
                                                                                                                                      cGCCAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGCCCtt             >  2:41680/1‑151 (MQ=255)
                                                                                                                                         cAGTGTGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGGGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGCCCTTCgg          >  1:527207/1‑151 (MQ=255)
                                                                                                                                          aGTGTGGTCACAGCACCGCCTTTTTCCTCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGCCCTTCGGc         <  1:455966/151‑1 (MQ=255)
                                                                                                                                           gtgtGGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGCCCTTCGGCa        <  1:1073095/151‑1 (MQ=255)
                                                                                                                                            tgtgGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGCCCTTCGGCaa       >  1:5968167/1‑151 (MQ=255)
                                                                                                                                             gtgGTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGCCCTTCGGCAAt      >  2:1796834/1‑151 (MQ=255)
                                                                                                                                               ggTCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGCCCTTCGGCAATCa    <  1:502939/151‑1 (MQ=255)
                                                                                                                                                 tCACAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGCCCTTCGGCAATCAcc  >  1:1418964/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GAGACTAATGCGGATAAGGCATCACGCAAGGCTTCTGGTGTCTGGCTGGCTGGCGTAGGAAGTTCACGACGATCGCGGATCTGCCCGTCAGCGCCAATCAGCGCGGCGGCAAGTTTAGTACCGCCGATATCAATCGCCAGTGTGGTCATAGCACCGCCTTTTTCATCGCTGTGTTGTACCACTGACAAATGTGCTCAAGACGCGTGATTGCAGAACCGACCGTCACCGCCCACGCGCCGTGGCGCATCGCATCCGCCGCCTGAGCAGGCGTGTTGTAACGCCCTTCGGCAATCACC  >  CP009273/3363561‑3363856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: