Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,774,4040TA24.3% 517.1 / 43.4 214intergenic (+27/‑171)lldD/trmLL‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base T (33/126);  new base A (50/1);  total (87/127)
Fisher's exact test for biased strand distribution p-value = 8.24e-25
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 221 total aligned reads displayed.

GGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTG  >  CP009273/3774257‑3774553
                                                                                                                                                   |                                                                                                                                                      
ggCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCtctc                                                                                                                                                     <  1:385270/151‑1 (MQ=255)
   gATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATG‑GGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTc                                                                                                                                                 <  1:5227221/151‑1 (MQ=255)
    aTGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTc                                                                                                                                                 <  1:4187511/151‑1 (MQ=255)
    aTGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCGCAACCTAACCCACTcccac                                                                                                                                                 >  2:2244332/1‑149 (MQ=255)
      gACGCTGACTGGCGCGAACTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGTCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCGCACCCAGACCCTAACCCtacg                                                                                                                                               >  2:1777978/1‑148 (MQ=255)
      gACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAg                                                                                                                                               <  1:3060301/151‑1 (MQ=255)
      gACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCGAACCCACTCCCTCat                                                                                                                                               >  2:511811/1‑150 (MQ=255)
      gACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCAAAACCTATCCcacat                                                                                                                                               >  2:4985458/1‑150 (MQ=255)
       aCGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCAAACCCAAACCCACGACCTCacg                                                                                                                                              >  2:3263195/1‑149 (MQ=255)
       aCGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCCCACCCAAAACCACTCCCACAgg                                                                                                                                              >  1:3345564/1‑151 (MQ=255)
        cGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAggg                                                                                                                                             <  2:5079484/151‑1 (MQ=255)
          cTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGTTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGGCCCCGCACCCTGACCCACTCCCACAggggg                                                                                                                                           >  2:2417615/1‑149 (MQ=255)
           tGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGgaga                                                                                                                                          <  2:2837095/151‑1 (MQ=255)
            gACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGagag                                                                                                                                         <  2:3193395/151‑1 (MQ=255)
              cTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAggg                                                                                                                                       <  1:2261805/151‑1 (MQ=255)
              cTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCCCCCCAAACCACTACCACACGGGGAggg                                                                                                                                       >  1:4655161/1‑151 (MQ=255)
                ggCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGa                                                                                                                                     <  1:3188378/151‑1 (MQ=255)
                   gcgAAATCGATCAGCGAACTTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGCAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCg                                                                                                                                  <  2:2945931/151‑1 (MQ=255)
                    cgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGt                                                                                                                                 <  1:4194979/151‑1 (MQ=255)
                    cgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCACACCCAAACCCACACCCACAGGGAGAGGGGGCCgg                                                                                                                                 >  1:5366905/1‑150 (MQ=255)
                     gAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGtt                                                                                                                                <  1:5160586/151‑1 (MQ=255)
                     gAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGtt                                                                                                                                <  2:405876/151‑1 (MQ=255)
                     gAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAAACCACTACCTCAGGGAGAGGGGACCGtt                                                                                                                                >  2:3396471/1‑151 (MQ=255)
                     gAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACACTAACCCAAACCCTCAGGGAGAGGGGCCCGtt                                                                                                                                >  2:4192799/1‑151 (MQ=255)
                     gAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGGTGCCTGCGGCACTGGCTCCCATGGCGAACGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGtt                                                                                                                                <  2:2499389/151‑1 (MQ=255)
                      aaaTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTc                                                                                                                               <  1:1318938/151‑1 (MQ=255)
                        aTCGATCAGCGAAATTACGCAAGATTCGCTGTTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCgg                                                                                                                             <  2:357581/151‑1 (MQ=255)
                        aTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGTGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAAACCACACCCACAGGGAGAGGGGACCGTTCgg                                                                                                                             >  2:420530/1‑151 (MQ=255)
                          cGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGgcg                                                                                                                           <  2:4443946/151‑1 (MQ=255)
                          cGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAAACCTCACCCTCAGGGAGAGGGGCCCGTTGGgcg                                                                                                                           >  2:3144510/1‑151 (MQ=255)
                          cGATCAGCGAAATTACGCAAGAGTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGgcg                                                                                                                           <  2:1908788/151‑1 (MQ=255)
                              cAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgt                                                                                                                       <  1:2750351/151‑1 (MQ=255)
                                 cGAAATTACGCAAGTTTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGTAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAAACCTAAACCGCAGGGAGAGGGGGCCCGTCGgcggggtttg                                                                                                                    >  2:1967959/1‑144 (MQ=255)
                                     aTTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCAAACCCACTACCACAGGGTGAGGGGACCGTTCGGCGGGGGATGTAca                                                                                                                >  2:2694537/1‑150 (MQ=255)
                                      ttACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTc                                                                                                               <  1:1249975/151‑1 (MQ=255)
                                         cGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAAACCGCAACCACAGGGAGAGGGGACCGTTAGGCGCAGTATGTACAccca                                                                                                            >  2:818799/1‑150 (MQ=255)
                                           cAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCa                                                                                                          <  1:3915889/151‑1 (MQ=255)
                                            aaGAGTCGCGGGTGCAGGGGCTGGGTAAAGAGTGGCCTGCGGCACGGGCGCCCATGGCGAAAGGGAATGCGGCATAGACGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTccc                                                                                                         <  2:4852958/151‑3 (MQ=255)
                                             aGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCAct                                                                                                        <  1:1539441/151‑1 (MQ=255)
                                             aGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCTAAACCAAAACCAAACGGGGAGGGGACCGTTCGGCGCAGTATGTACACCCacaca                                                                                                        >  2:3241707/1‑150 (MQ=255)
                                               aTTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCACACCCAAAACCACAACCGCAGGGAGAGGGGGCCGGTAGGCGCGGGATGTACTCCCGCAcacg                                                                                                      >  2:3626059/1‑148 (MQ=255)
                                                   gCTGGTGCTGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa                                                                                                  <  2:2616129/151‑1 (MQ=255)
                                                    cTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTCACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAc                                                                                                 <  1:413174/151‑1 (MQ=255)
                                                       gTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGac                                                                                              <  2:3630312/151‑1 (MQ=255)
                                                       gTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGac                                                                                              <  1:2955042/151‑1 (MQ=255)
                                                        tGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAACCCACTACCACAGGGAGAGGGGACCCTTCGGCGCGGTATGTACTCCCGCCATCAGAAACGaca                                                                                             >  2:3477384/1‑151 (MQ=255)
                                                           aGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCg                                                                                          <  1:478157/151‑1 (MQ=255)
                                                              ggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCAc                                                                                       <  2:2354198/151‑1 (MQ=255)
                                                                cTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACACAAAACAACACCCACAGGGAGAGGGGACCGGTCGGCCCAGGATGTATTCCCGCAATCGTAAAAGACACCGccaac                                                                                     >  1:5303154/1‑147 (MQ=255)
                                                                 tGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCActct                                                                                    <  1:1337392/151‑1 (MQ=255)
                                                                  gggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtt                                                                                   <  2:4700666/151‑1 (MQ=255)
                                                                   ggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttt                                                                                  <  1:712424/151‑1 (MQ=255)
                                                                    gTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGTCATATTCGTTTTCGCCCCCACAACCGAAAACACTACCACACGGAGAAGGGACCGTTCGGGGCTGAATTTTAAACCTCACAAAGAAAAGACACCCCACACattt                                                                                 >  2:439307/1‑151 (MQ=255)
                                                                      aaaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCAAAACCACACCCTCAGGGTGAGGGGGCCGGTCGGCGGTGGATGTACACCCACACACTGAAACCACACCCCACACtttttt                                                                               >  2:3899659/1‑151 (MQ=255)
                                                                        agagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTt‑c                                                                            <  1:3028187/151‑1 (MQ=255)
                                                                         gagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTt‑ct                                                                           <  1:1953878/151‑1 (MQ=255)
                                                                           gTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTcc                                                                         <  1:4419629/151‑1 (MQ=255)
                                                                             tGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCt                                                                       <  1:2382481/151‑1 (MQ=255)
                                                                              gCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTc                                                                      <  1:421767/151‑1 (MQ=255)
                                                                                   cGGCACTGGCTCCCATGGCGAAAGGGACTGCGGCATAGTCGTTTGCGCCCCCTCACCCAAACCCGAACCCCCAGGGCGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCAGAAACGACACCGCCCACTTTTTTT‑ATACCGCGcccc                                                                 >  2:2806951/1‑151 (MQ=255)
                                                                                     gCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTc                                                               <  1:3233390/151‑1 (MQ=255)
                                                                                     gCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTc                                                               <  2:3785799/151‑1 (MQ=255)
                                                                                     gCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCATTTTTT‑CTCCCTCGCCCCTc                                                               <  2:3088741/151‑1 (MQ=255)
                                                                                       aCTGGCTCCCATGGCGACAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCg                                                             <  2:624431/151‑1 (MQ=255)
                                                                                       aCTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCg                                                             <  1:4364615/151‑1 (MQ=255)
                                                                                       aCTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCg                                                             <  1:1652969/151‑1 (MQ=255)
                                                                                       aCTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGATTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCg                                                             <  2:4831991/151‑1 (MQ=255)
                                                                                        cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGGGCCCCGTCACCCTAACCCTCAGCCACCGGGGGAGGGGCCCCGTTGGGGCGGTAGGTAATACCTCACACTTTAACGACACCGCACTCTTTTTTT‑ATACCACGCCCCGCCgg                                                            >  2:4341713/1‑151 (MQ=255)
                                                                                        cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCgg                                                            <  2:48156/151‑1 (MQ=255)
                                                                                         tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCGCACCCTAAACCAATCCCCCAGGGAGAGGGGTCCCTTCGGCGCGGTATGTTCACCCACACACAGAAACGACACCGCACACATTTTTT‑ATACCACGCCCCACCggg                                                           >  1:4031479/1‑151 (MQ=255)
                                                                                         tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGAGTGCGCCCCCTCACCCTAACCCTCGCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCggg                                                           <  1:3666334/151‑1 (MQ=255)
                                                                                          ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCgggg                                                          <  1:2429540/151‑1 (MQ=255)
                                                                                          ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCACCCTAAACCACGACCGAGGGGTGGTGGGACCGTTGGGCGGGGGTTGTAATCCCGCCCTCGGTCACGGAAGCGCACACTTTTTTT‑CTGCCACGCCCCACCgggg                                                          >  2:2652693/1‑151 (MQ=255)
                                                                                           gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGga                                                         <  2:1166135/151‑1 (MQ=255)
                                                                                           gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGga                                                         <  2:5165917/151‑1 (MQ=255)
                                                                                               ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCATACCCACTCCCTAAGGGATAGGGGGACGTTCGGGGCGGGATGTAAACCCGCACGCTGAAACGACACCCCACTCATTTTTT‑ATAACACGCCCCACCGGGGAGAgg                                                     >  2:3738572/1‑151 (MQ=255)
                                                                                                  tGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGcc                                                  <  1:1023513/151‑1 (MQ=255)
                                                                                                   ggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCg                                                 <  1:406170/151‑1 (MQ=255)
                                                                                                   ggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCg                                                 <  2:3137063/151‑1 (MQ=255)
                                                                                                      gAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAACCCACTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACACTGAAACGACAACGCACTCATTTTTT‑CTACCTCGCCCCACCGGGGAGATGGCCgggg                                              >  2:4029826/1‑151 (MQ=255)
                                                                                                      gAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCAAACCCAAACCCACTACCACAGGGAGAGGGGAACGTTAGGCGCAGTATGTACACCCACACACTGAAACGACACCCCACACATTTTTT‑ATACCGCGCCCCACCGGGGAGAGGGCCgggg                                              >  2:341682/1‑151 (MQ=255)
                                                                                                       aaaGGGAATGCGGCATAGTCGTTTGCCCCCCCACACCCTAACCCACTCCCACAGGGTGAGGGGCCCGGTCGGCCCGGTATGTTCTCCCTCACGAGGAAACGACACCGCCCACTTTTTTT‑CAACCACGCCCCACCCGGGTTAGGGCCggggg                                             >  2:757202/1‑150 (MQ=255)
                                                                                                        aaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTg                                            <  1:1672222/151‑1 (MQ=255)
                                                                                                            gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg                                        <  1:4575053/151‑1 (MQ=255)
                                                                                                            gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg                                        <  1:915566/151‑1 (MQ=255)
                                                                                                              aggCGGCATAGTCGTGTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGa                                      <  2:1784046/149‑1 (MQ=255)
                                                                                                                 cGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATGTTCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaaa                                   <  2:1567649/151‑1 (MQ=255)
                                                                                                                  ggCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATGGACTCCCTCACTCTGAAACGACACCGCACTCATTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGGGAGGGGAAAAg                                  <  1:173212/151‑1 (MQ=255)
                                                                                                                           gTTTGCGCCCCCACACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGGTCGGCGCTGTATGTACTCCCTCACTCTGTAACGACACCGCACTCTTTTTTT‑CTCCCACGCCCCACCGGGGAGAGGGCCGGGGGGAGGGGAAAAGGCCGCAcag                         >  2:574202/1‑149 (MQ=255)
                                                                                                                               gcgcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGCGCGGGCCGGGGGGAGGGGAAAAGGCCGCACTGCTcc                     >  2:3330452/1‑150 (MQ=255)
                                                                                                                                 gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAcc                   >  2:2473382/1‑151 (MQ=255)
                                                                                                                                 gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAcc                   >  2:4693589/1‑151 (MQ=255)
                                                                                                                                   ccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCaa                 >  1:2708878/1‑151 (MQ=255)
                                                                                                                                     ccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAtt               >  1:4793251/1‑151 (MQ=255)
                                                                                                                                         aCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt           >  1:1144005/1‑151 (MQ=255)
                                                                                                                                             aaccccTCCCCCTCTGGTTGGGGGGTCGGTTGGGGGTTTTTTGTACCCCCTCACTCTAAAAC‑CCACCCAAATTTTTTTTTACCCCCCCCCCCCTGGGGGGTGGGGGCGGGGGGGGGGGCACAAGGCCGCACTGCTCACCAATTTTCTGCTa       <  2:108185/148‑1 (MQ=255)
                                                                                                                                               aCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc     >  1:2504002/1‑151 (MQ=255)
                                                                                                                                                cccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc    >  2:5141495/1‑151 (MQ=255)
                                                                                                                                                 ccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt   >  1:4874421/1‑151 (MQ=255)
                                                                                                                                                  ctctCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCAGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg  >  1:2180290/1‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
GGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT‑CTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTG  >  CP009273/3774257‑3774553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑