BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 776778	231 (0.520)	40 (0.120)	29/220	23.9	18.1%	intergenic (+100/‑47)	lysY/lysZ	tRNA‑Lys/tRNA‑Lys
*	?	CP009273	777267 =	192 (0.590)	40 (0.120)	29/220	23.9	18.1%	intergenic (+159/‑274)	lysQ/nadA	tRNA‑Lys/quinolinate synthase, subunit A
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 240 total aligned reads displayed.

TTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAAC  >  CP009273/776630‑776927

ttGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTAGCGCCAGCAACGGCCCGTAGGGCGAGCGACGCGAGTCATCCTGCACGACCCACCAAtg                                                                                                                                                      >  2:6995634/1‑149 (MQ=255)

 tGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCTAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCt                                                                                                                                                     <  2:2902000/150‑1 (MQ=255)

   aCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAtgtaa                                                                                                                                                   >  1:330548/1‑146 (MQ=255)

     ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAGGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTTaat                                                                                                                                                 >  2:1740833/1‑149 (MQ=255)

     ttttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTaaa                                                                                                                                                 >  1:3945724/1‑150 (MQ=255)

         aaTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAGaga                                                                                                                                             >  1:746096/1‑148 (MQ=255)

         aaTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACGAAGATGATAAGAGTGACGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCCTCCTGCACGACCCACCAATGTTAAAGaat                                                                                                                                             >  2:237376/1‑148 (MQ=14)

            cAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaaaaaagcgcc                                                                                                                                          >  1:2853315/1‑143 (MQ=255)

             aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGACAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGcc                                                                                                                                         <  1:5776897/150‑1 (MQ=255)

             aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAAAATCAAACAAAGATGATAAGAGTGAATCAAAACGATACTCCAGCAACGGACCGTTGTGCGAGCGAAGCGAGACATCATGCAAGAACCAACAATGTTAAAGATTgtga                                                                                                                                         >  2:3938722/1‑147 (MQ=9)

             aaTTGGTAGCTTGTTCGAATCCTGCACGACCCACCAGATTTAACTTCTAAATCAGATGATAAGCGTGATGTTTATATTTGCGACAGAATCGGCCCGTAGGGAGAGCGATGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGcc                                                                                                                                         <  1:1191327/150‑1 (MQ=14)

                  gTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAg                                                                                                                                    <  1:660435/150‑1 (MQ=11)

                   tCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAACACAGATGTTAAGCGTGAAGGATAACGTTGCGGCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTATTAACGATTGGAACCGAGt                                                                                                                                   >  2:5784818/1‑150 (MQ=11)

                       aGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCTAACTCAGATGTTAAGCGTGTAGGATAACGTTGCGACAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTaaaa                                                                                                                               <  1:2270339/150‑1 (MQ=255)

                       aGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTaaaa                                                                                                                               >  1:1804762/1‑150 (MQ=255)

                       aGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTaaaa                                                                                                                               >  2:1245501/1‑150 (MQ=255)

                       aGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTaaaa                                                                                                                               <  2:2031057/150‑1 (MQ=255)

                           tCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGTTGGTAAGCGTGTAGGATAACTTTGCGTCAGCAACGGCCCGTCGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGGCCCGAGTAAAAGTcg                                                                                                                           >  2:376986/1‑149 (MQ=11)

                            cGAATCCTGCTCGTCTAATCTGTTTTTACTTCATACTCTGTTTTTAAGGTTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCtt                                                                                                                          <  1:3922056/150‑1 (MQ=17)

                            cGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCtt                                                                                                                          <  1:508956/150‑1 (MQ=255)

                             gAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCTACCAATCTTAAAGATTGGCCCCGAGTAAAAATCttt                                                                                                                         <  1:97995/150‑1 (MQ=17)

                             gAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCAGCACGACCCACCAATAATAAAGTTTGGACCGGAGTAAAAATCttt                                                                                                                         >  2:1651729/1‑150 (MQ=17)

                                aaatGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAg                                                                                                                      >  1:3853234/4‑150 (MQ=255)

                                 ccTGCACGACCCTCCAGTTTTAACTTCAATCTCTGTTGTTAAGCGTGATGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAgg                                                                                                                     <  1:6899566/150‑1 (MQ=21)

                                      aCGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAaca                                                                                                                >  2:656795/1‑150 (MQ=255)

                                       cGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAacac                                                                                                               <  1:6817731/150‑1 (MQ=255)

                                       cGACCCACCAGGTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTTGGGCGAGCGAAGCGAGTCATCCTGCCCGACCCACCAATGTGAAAGATTGGCCCCGAGTAGAAATCTTGCTGGTAactc                                                                                                               >  1:1596726/1‑148 (MQ=18)

                                        gACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCGCGAGTCAATATCTTTCAGGGAAcccc                                                                                                              >  2:6045549/1‑150 (MQ=18)

                                          cccACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCg                                                                                                            <  1:4233760/150‑1 (MQ=255)

                                          cccACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCg                                                                                                            >  2:6184666/1‑150 (MQ=255)

                                           cccccaGTCTTAACAACAAACTCAGATCTTTAGCGTCACGGATAACGTCGCGCCTGAATCGGCCCGTTGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGt                                                                                                           <  2:5986984/147‑1 (MQ=25)

                                             accaGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTAt                                                                                                         >  1:5114672/1‑150 (MQ=255)

                                                aGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGACGCGAGTCATCCTGCACGACCCACCAATCTTAAATATCGGCCCCGAGTAAAAATCTTTCGGGTAACCCCCGTAtcag                                                                                                      >  2:6438307/1‑147 (MQ=21)

                                                aGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATggg                                                                                                      <  1:1626911/150‑1 (MQ=255)

                                                aGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGGTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAATATTGGCCCCCAGTAAAAATATTTCAGGTAACACCCGTAAggt                                                                                                      >  1:3788640/1‑149 (MQ=21)

                                                 gTTTTAACATCAAACACAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                     <  2:5775836/150‑1 (MQ=255)

                                                    ttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGt                                                                                                  >  1:1044062/1‑150 (MQ=255)

                                                     tAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGtt                                                                                                 <  2:5492625/150‑1 (MQ=255)

                                                      aaCATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGGAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTa                                                                                                <  1:2817830/150‑1 (MQ=18)

                                                       aCATCCAACTCACTAGATAAGCGAGAATGAAACCGTTCCGCCAGAAACGGCCCCTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAg                                                                                               <  1:616162/150‑1 (MQ=25)

                                                         aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCt                                                                                             >  1:2892805/1‑150 (MQ=255)

                                                          tCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                            <  1:2345984/150‑1 (MQ=255)

                                                          tCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                            <  2:3912257/150‑1 (MQ=255)

                                                           cAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                           >  1:2132229/1‑150 (MQ=255)

                                                           cAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                           <  2:6317775/150‑1 (MQ=255)

                                                             aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGTGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                                                                                         <  2:2245452/150‑1 (MQ=255)

                                                             aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                                                                                         >  2:400173/1‑150 (MQ=255)

                                                               cacAGATGTTAAGCGTGTAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTg                                                                                       <  2:1026355/148‑1 (MQ=255)

                                                               cTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTg                                                                                       <  1:58974/150‑1 (MQ=255)

                                                                tCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTGAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTgg                                                                                      <  2:72305/150‑1 (MQ=255)

                                                                acAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTgg                                                                                      >  2:45246/2‑150 (MQ=255)

                                                                 cAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGt                                                                                     <  2:360602/150‑1 (MQ=255)

                                                                    aTGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAATTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTaga                                                                                  >  2:3467938/1‑150 (MQ=255)

                                                                    aTGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTaga                                                                                  <  2:5064461/150‑1 (MQ=255)

                                                                    aTGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTaga                                                                                  <  2:6829438/150‑1 (MQ=255)

                                                                      gTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGACATCCTGCACGACCCACCAATGTTAAATATGGCCCACGAGTAAAAATCTTGCAGGTAACACCCGTAAGGTTCGTTAGATCAGTGGGTAGAGc                                                                                >  1:1404678/1‑150 (MQ=21)

                                                                       ttAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCa                                                                               <  1:4358759/150‑1 (MQ=255)

                                                                          aacGTGAAGGATAACGTTGCATGAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCTTCATGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGGAGGGGGCGTTAGCTCAGTTGGTAGAGCAGtt                                                                            >  2:5503765/3‑150 (MQ=25)

                                                                          aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGtt                                                                            <  2:3346764/150‑1 (MQ=255)

                                                                           gCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCt                                                                                                                           >  2:867699/1‑102 (MQ=255)

                                                                           gCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCt                                                                                                                           <  1:867699/102‑1 (MQ=255)

                                                                             gTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGAc                                                                         <  1:5176176/150‑1 (MQ=255)

                                                                                    aTAACGTTGCGCGATCTACGGCCCGTAGGGCGCGCGTCGCGTGTCATCCTGGACGACCCACCCCTCTTAAAGATTGGCCCCGCGTATACATCTTTCAGTTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                  <  2:2120859/150‑1 (MQ=25)

                                                                                      aaCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCa                                                                <  2:2485503/150‑1 (MQ=255)

                                                                                         gTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTAAAAGATAGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGTTAGTTAGCTCAGTTGGTAGAGCAGTTGACTTTAAATCAAtt                                                             >  1:2628475/1‑150 (MQ=38)

                                                                                          ttGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTg                                                            <  2:6847806/150‑1 (MQ=255)

                                                                                          ttGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTg                                                            >  1:686450/1‑150 (MQ=255)

                                                                                            gcgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGt                                                          <  1:6797269/150‑1 (MQ=255)

                                                                                                  gCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAgg                                                    <  1:4691647/150‑1 (MQ=255)

                                                                                                  gCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAgg                                                    <  1:5726397/150‑1 (MQ=255)

                                                                                                   cAACGGCCCGTAGGGCGAGCGAAGCTAGTCATCCTGCACCACCCACCACTCTAACCGATGGGCCCCGAGTAAAAATCTCTCCCGTAACCCCCGTATGGGTCGTTAGCTCAGTGGGTAGAGCAGTTGACTTTTAAGCAATTGGTCGCAGGt                                                   <  2:6923154/150‑1 (MQ=25)

                                                                                                   cAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATAGGCCCCTAGTAAAATTGTTTCAGTTAACGCCAGAATGGGTGGTAATCTGAAATGGTATAGCAGGTGACTTTTAATCAGTTGGTCGCAGGt                                                   >  1:2033006/1‑150 (MQ=21)

                                                                                                        gCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATAGGCCACGAGTAAAAATATTTCAAGTCACACCACTAATGTTAGAGTGATAACATGTTAGATCAGATGAATATTATTCAATTGGTCGCAgtatagaa                                              >  2:6976240/1‑143 (MQ=12)

                                                                                                         cccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAtg                                                                                                                                                      >  2:2394161/1‑44 (MQ=25)

                                                                                                          ccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATc                                            <  2:3064514/150‑1 (MQ=255)

                                                                                                           cGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                           <  2:5620423/150‑1 (MQ=255)

                                                                                                            gTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCt                                          <  2:1504349/150‑1 (MQ=255)

                                                                                                               gggCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCa                                       <  2:4479711/150‑1 (MQ=255)

                                                                                                                   gagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                   <  1:45246/150‑1 (MQ=255)

                                                                                                                         agcgaGTCATCCTGCACGACCCACCAATCTAAAATATAGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccacca                             >  1:3265714/1‑150 (MQ=255)

                                                                                                                             aGTCATCCTGCACGACCCACCACTCTACAAGATTGGCCCCGAGTTAAACTACTGCAGTTAACACCCGTAAGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAttt                         <  1:1350670/150‑1 (MQ=18)

                                                                                                                               gaaTCCTGCACGACCCACCAATCTAAAAGTTTGTACCCGTCTAAAAAGCTTTCGGTTAACTGGCGTATGGGTCGTTAGCTAAGTTGGTAGAGCAGTTGAATTTAAATGAAATTGTCGGATGTTCGAATCCTGCACGACCCTGCAATTTaa                       >  1:257090/3‑150 (MQ=12)

                                                                                                                                cATCCTGCACGACCCGACAATCTTAAAGATTGGCCCCGTGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaaa                      <  1:2363904/150‑1 (MQ=255)

                                                                                                                                aaTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaaa                      <  2:6610745/149‑1 (MQ=255)

                                                                                                                                   ccTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCATACAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggt                   <  2:140072/150‑1 (MQ=255)

                                                                                                                                    cTGCACGACCCACCAATCTTAAAGAGTGGCCCCGTGTACAAATCTTTCAGGTAAAACCCGTATGGGTGGTTTGCTCAGTTGGTAGAGCCGTGGTGTTTGGTTCAATTGGTCGCGGGTTCGATTCCTGCGGGTCCCACGAATTTAAAggtg                  >  2:4992737/1‑150 (MQ=255)

                                                                                                                                     tGCACGACCCACCAATCTTAAATATAGGCCCCGAGTAAAAATGTTTCAGTTCACACCCGAATTGGTCGTATGATCAGTGGGGAGAGCAGGTGACTTGTGATCAATTCGACGCAGGATCGAGTCCTGCACGACCCACCAAATTAAAggtgg                 >  2:269265/1‑150 (MQ=255)

                                                                                                                                          gACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCCCGACCCACCAATTTAAAGGTGGTTACt            >  2:4284692/1‑150 (MQ=255)

                                                                                                                                           accaaccaATCTTAAAGTTTGGGCTCGTGTATAATTTTCCCTGTTAACACCCCTACGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATAAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTg           <  1:6495546/150‑1 (MQ=17)

                                                                                                                                           aCCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTg           >  1:3393056/1‑150 (MQ=255)

                                                                                                                                              caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTa        >  1:5988223/1‑150 (MQ=255)

                                                                                                                                               accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag       >  1:1143369/1‑150 (MQ=255)

                                                                                                                                               accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGGag       >  2:2640041/1‑150 (MQ=255)

                                                                                                                                               accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAGTTAAAGGTGGTTACTGGTag       >  1:800434/1‑150 (MQ=255)

                                                                                                                                                ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAATGGTGGTTACTGGTaga      >  1:637250/1‑150 (MQ=255)

                                                                                                                                                ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGGTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACGAATTTAAAGGTGGTGGCTGGTagt      >  1:6104452/1‑149 (MQ=255)

                                                                                                                                                 caATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCATGTAACACCCGTAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag     <  2:6929886/150‑1 (MQ=255)

                                                                                                                                                   aTCTAAAAGATTGGCCCCGAGTAAATATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa   <  1:5997804/150‑1 (MQ=255)

                                                                                                                                                    tCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGTGAAc  >  1:3711433/1‑150 (MQ=255)

                                                                                                                                                    tCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAAc  <  1:6976799/150‑1 (MQ=255)

TTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAAC  >  CP009273/776630‑776927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.