Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273580,7840GA32.9% 797.1 / inf 600V102V (GTC→GTT) ompTDLP12 prophage; outer membrane protease VII (outer membrane protein 3b)
Reads supporting (aligned to +/- strand):  ref base G (192/210);  new base A (120/77);  total (313/287)
Fisher's exact test for biased strand distribution p-value = 3.04e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 608 total aligned reads displayed.

GCCATGAGTCCCAGGCGGTAATTGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGTTGACTGACTTTTCGGCCTCCTTCTTC  >  CP009273/580635‑580933
                                                                                                                                                     |                                                                                                                                                      
gCCATGAGTCCCAGGCGGTAATTGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCg                                                                                                                                                        >  1:3944968/1‑150 (MQ=255)
 ccATGAGTCCCAGGCGGTAATTGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGa                                                                                                                                                       >  1:3090529/1‑150 (MQ=255)
       gTCCCAGGCGGTAATTGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCatat                                                                                                                                                 >  1:102151/1‑150 (MQ=255)
       gTCCCAGGCGGTAATTGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCatat                                                                                                                                                 >  2:3624180/1‑150 (MQ=255)
        taccAGGCGGTAATTGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATAtt                                                                                                                                                <  2:5335000/148‑1 (MQ=255)
        tCCCAGGCGGTAATTGGGTTAGTTGAGTAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGAGTCTACTTTCATCCGTCCAGGTTCAGGGGTTACTGGAATCAATCCAGTCCTGATCTACCATAtt                                                                                                                                                >  2:6604364/1‑150 (MQ=255)
            aGGCGGTAATTGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCa                                                                                                                                           >  1:2150839/1‑150 (MQ=255)
            aGGCGGTAATTGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCa                                                                                                                                           <  2:6358089/150‑1 (MQ=255)
               cGGTGATTGGGTGCGGTGAGGAGCCAGCCTTTGATATTCGGATCAAATTCGTTGGCGTAATTGAGTGGGGGATCCGGGTGGCTACTGTCATCCGTCCAGGGTCGGGGGGTTCTGGTATCCGTGCAGTCCTGAGCGTCCCTCTG‑GCCACCt                                                                                                                                        >  2:6086611/1‑150 (MQ=255)
                  tAATTGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCgg                                                                                                                                     >  2:3770610/1‑150 (MQ=255)
                    aTTGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCt                                                                                                                                   <  2:4400112/150‑1 (MQ=255)
                     ttGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTg                                                                                                                                  <  1:5713717/150‑1 (MQ=255)
                               tGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTg                                                                                                                        >  1:1931613/1‑150 (MQ=255)
                                  ggagCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGGTGTcc                                                                                                                     >  1:6634520/1‑150 (MQ=255)
                                   aaaccagccTTTAACGTTCAAATCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTcca                                                                                                                    <  1:6108555/147‑1 (MQ=255)
                                     gccagccTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTccagc                                                                                                                  <  1:5479740/150‑1 (MQ=255)
                                     accagccTTTAACGTTCAAATCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGTCTATTGAGAGTGGTccagc                                                                                                                  >  2:2827440/2‑150 (MQ=255)
                                       cagccTTTAACGTTCAAATCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTccagcca                                                                                                                <  1:4484840/150‑1 (MQ=255)
                                       cagccTTTAACGTTCAAATCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTccagcca                                                                                                                <  1:679005/150‑1 (MQ=255)
                                        agccTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTccagccag                                                                                                               <  1:7174944/150‑1 (MQ=255)
                                        agccTTTAACGTTCAAATCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTccagccag                                                                                                               >  1:2255770/1‑150 (MQ=255)
                                        agccTTTAACGTTCAAATCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTccagccag                                                                                                               >  1:4400208/1‑150 (MQ=255)
                                        agccTTTAACGTTCAAATCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATGGTGAGTGGTccagccag                                                                                                               >  2:5637093/1‑150 (MQ=255)
                                         gccTTTAACGTTCAAATCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCAATTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCcagccagc                                                                                                              >  2:2361458/1‑150 (MQ=255)
                                          ccTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCcagca                                                                                                             <  1:1338771/150‑1 (MQ=255)
                                             ttaacgttCAAATCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCagctgca                                                                                                          >  1:3269402/7‑149 (MQ=255)
                                               gATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGcccc                                                                                                        <  1:1507493/150‑1 (MQ=255)
                                                 tatTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCga                                                                                                      >  2:4067315/1‑150 (MQ=255)
                                                   ttCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCgata                                                                                                    <  2:1554904/150‑1 (MQ=255)
                                                   ttCAAATCAACTTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGcaccaaca                                                                                                    <  2:1094184/150‑5 (MQ=255)
                                                   ttCAAATCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGcaccaaca                                                                                                    <  1:3788821/150‑5 (MQ=255)
                                                    tcaaatcaaaTTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGcaccaaccg                                                                                                   >  2:1861011/1‑145 (MQ=255)
                                                    tCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCATCCAGCAGCCCCgatag                                                                                                   <  2:1713603/150‑1 (MQ=255)
                                                    tCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCgatcg                                                                                                   <  2:6238388/150‑3 (MQ=255)
                                                     caaaTCACATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGGTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCaacaga                                                                                                  <  1:2364914/147‑1 (MQ=255)
                                                     caaaTCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCaacaga                                                                                                  <  2:5805540/147‑1 (MQ=255)
                                                      aaaTCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATTCCCCCCCCCGACTAGTGAGAGTGGTCCAGCCAGCTGCACCaacaga                                                                                                  >  2:4591733/3‑150 (MQ=255)
                                                      aGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCgatagat                                                                                                 <  1:4845540/150‑1 (MQ=255)
                                                       gATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCgatagata                                                                                                >  1:161048/1‑150 (MQ=255)
                                                        aTCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGatat                                                                                               >  2:3845203/1‑150 (MQ=255)
                                                         tCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATc                                                                                              <  1:477884/150‑1 (MQ=255)
                                                         tCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATc                                                                                              <  2:7099469/150‑1 (MQ=255)
                                                         tCAAATTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTAGTGAGAGTGGTCCAGCCAGCTGCACCaacagataac                                                                                              >  1:2079237/1‑148 (MQ=255)
                                                           aaaTTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCaacagataacca                                                                                            <  1:5404736/150‑5 (MQ=255)
                                                            aaTTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTgg                                                                                           <  2:6831585/150‑1 (MQ=255)
                                                            aaTTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGGTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTgg                                                                                           >  2:4940304/1‑150 (MQ=255)
                                                             aTTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCaacagataaccatg                                                                                          >  1:6930194/1‑144 (MQ=255)
                                                             aTTCGTTGGCATAATTAAGACGTGTATCAGGATGCCTGCTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCaacagataaccatg                                                                                          >  2:5449438/1‑144 (MQ=255)
                                                               tCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGc                                                                                        >  2:4810343/1‑150 (MQ=255)
                                                                  ttGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATc                                                                                     >  1:939653/1‑150 (MQ=255)
                                                                   tGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCa                                                                                    <  2:810951/150‑1 (MQ=255)
                                                                   tGGCATAATTGAGTTGTGAATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCa                                                                                    <  2:3191594/150‑1 (MQ=255)
                                                                     gCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCaaa                                                                                  <  2:1500629/150‑1 (MQ=255)
                                                                          aTTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCa                                                                             >  2:2708799/1‑150 (MQ=255)
                                                                           ttGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCaa                                                                            <  1:4946427/150‑1 (MQ=255)
                                                                            tGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCaat                                                                           <  1:3676122/150‑1 (MQ=255)
                                                                            tGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTACTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGAAGCCCCGATAGATATCTGGGGCATCAAATACCaat                                                                           >  2:5043042/1‑150 (MQ=255)
                                                                              aGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCaatta                                                                         <  1:4189531/150‑1 (MQ=255)
                                                                               gTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCaattaa                                                                        >  2:2194136/1‑150 (MQ=255)
                                                                                ttGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCaattaat                                                                       <  1:6414882/150‑1 (MQ=255)
                                                                                  gtgtATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTg                                                                     >  2:4323073/1‑150 (MQ=255)
                                                                                  gtgtATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTg                                                                     <  2:5992350/150‑1 (MQ=255)
                                                                                  gtgcATCAGGGTGTCTACTTTCATCCGTCCAGGGTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATCTT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCCGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTg                                                                     <  1:5088351/150‑1 (MQ=255)
                                                                                   tgtATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGc                                                                    >  2:3400621/1‑150 (MQ=255)
                                                                                     tATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCAc                                                                  >  2:524676/1‑150 (MQ=255)
                                                                                           ggTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTtaa                                                            <  1:6998087/150‑1 (MQ=255)
                                                                                           ggTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTtaa                                                            >  2:1971482/1‑150 (MQ=255)
                                                                                              gtCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTtaataa                                                         >  1:1182860/1‑150 (MQ=255)
                                                                                              gtCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTtaataa                                                         >  1:5130394/1‑150 (MQ=255)
                                                                                              gtCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTtaataa                                                         >  1:6153823/1‑150 (MQ=255)
                                                                                              gcctgcTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCAACAGATAACCATGGATTCAGCTCCCAGTTAACGGCGCCTTtaagaa                                                         >  1:4639502/6‑150 (MQ=255)
                                                                                                cttcTTTCATCCGTCCTGGTTCCGGGGTTTCTGGAATCATTCCAGTCCTGATCGACCATAGT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGTTATCTGGGGGATCAAATCCCAATTAATTGCACCTTTTTTAAtt                                                       <  2:3096186/147‑1 (MQ=255)
                                                                                                 tgcTTTCATCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCAACAGATAACCATGGTTTCAGCTCCCAGTTAACGGCGCCTTTaagaatgg                                                      >  2:1235086/3‑148 (MQ=255)
                                                                                                       cATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGt                                                >  2:6407610/1‑150 (MQ=255)
                                                                                                       cATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGt                                                <  1:7066534/150‑1 (MQ=255)
                                                                                                        aTCTGTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCAACAGATAACCATGGATTCAGCTCCCAGTTAACGGCGCCTTTAAGAATGGCGGCGtt                                               >  2:6925953/1‑150 (MQ=255)
                                                                                                           tgTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCAAATT‑CCCCCCCCGACTATTGAGAGTGGGCCAGCCAGCTGCACCAACAGATAACCATGGATTCAGCTCCCAGTTAACGGCGCCTTTAAGAATGGCGGCGTTact                                            <  2:474136/149‑3 (MQ=255)
                                                                                                            gTCCATGTTCCGGGAGTCCCGGAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCAACAGATAACCATGGATTCAGCTCCCAGTTAACGGCGCCTTTAAGAATGGCGGCGTTACTg                                           >  1:4743607/1‑150 (MQ=255)
                                                                                                            gTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTg                                           <  1:6362530/150‑1 (MQ=255)
                                                                                                              ccAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGaa                                         >  1:1255231/1‑150 (MQ=255)
                                                                                                              ccAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGaa                                         >  1:5573169/1‑150 (MQ=255)
                                                                                                               cAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAAt                                        <  1:6001516/150‑1 (MQ=255)
                                                                                                                   ttCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTcc                                    <  2:1418699/150‑1 (MQ=255)
                                                                                                                    tCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCa                                   <  2:5734250/150‑1 (MQ=255)
                                                                                                                      cGGGGGTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCGGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCACATCCCAAATAAGTTCACCTTTAATACTTGCAGCGTTATTGAATTTCCAgg                                 <  2:7029219/150‑2 (MQ=255)
                                                                                                                        gggTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCg                               >  1:3419862/1‑150 (MQ=255)
                                                                                                                            tACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGtt                           <  2:2591435/150‑1 (MQ=255)
                                                                                                                               tGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGTtgac                        <  1:2842834/150‑1 (MQ=255)
                                                                                                                               cggAATCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCAACAGATAACCATGGATTCAGCTCCCAGTTAACGGCGCCTTTAAGAATGGCGGCGTTACTGTATTTCCAGTCCAGTtggc                        <  1:808263/149‑3 (MQ=255)
                                                                                                                               cggAATCCATCCAGTCCTGATCAAACATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCAACAGATAACCATGGATTCAGCTCCCAGTTAACGGCGCCTTTAAGAATGGCGGCGTTACTGTATTTCCAGTCCAGTtggc                        <  2:103342/149‑3 (MQ=255)
                                                                                                                                ggAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGACCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGTtgact                       >  1:3568376/1‑150 (MQ=255)
                                                                                                                                  aaTCCATCCAGTCCTGATCAACCATATT‑CCCCCCCCGACTATTGAGAGTGGTCCAGCCAGCTGCACCAACAGATAACCATGGATTCAGCTCCCAGTTAACGGCGCCTTTAAGAATGGCGGCGTTACTGTATTTCCAGTCCAGTtggctga                     >  1:5209363/1‑150 (MQ=255)
                                                                                                                                    tccatccaGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGTTgactgact                   >  1:1445450/1‑150 (MQ=255)
                                                                                                                                       atccaGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGTTGACTGACtttt                <  1:2695420/150‑1 (MQ=255)
                                                                                                                                       atccaGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGTTGACTGACtttt                <  1:1682924/150‑1 (MQ=255)
                                                                                                                                       atccaGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGTTGACTGACtttt                >  2:5172895/1‑150 (MQ=255)
                                                                                                                                                tGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGTTGACTGACTTTTCGGcctcct       <  1:2546401/150‑1 (MQ=255)
                                                                                                                                                 gATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGTTGACTGACTTTTCGGCCTCctt      >  1:2927578/1‑150 (MQ=255)
                                                                                                                                                    cGACCATCTT‑GCCACCTCGGCTGCCGATAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATACTTGCAGCGTTATTGAATTTCCAGTCGAGTTGACTGACTTTTCGGCCTCcttctt   <  2:416424/150‑1 (MQ=255)
                                                                                                                                                    cGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGTTGACTGACTTTTCGGCCTCcttctt   <  2:2958143/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GCCATGAGTCCCAGGCGGTAATTGGGTTCGTTGAGGAGCCAGCCTTTGATATTCAGATCAAATTCGTTGGCATAATTGAGTTGTGTATCAGGGTGTCTACTTTCATCCGTCCAGGTTCCGGGGTTACTGGAATCCATCCAGTCCTGATCGACCATATT‑GCCACCTCGGCTGCCGAGAGTTGTCCAGCCAGCAGCCCCGATAGATATCTGGGGCATCAAATCCCAATTAATTGCACCTTTAATAATTGCAGCGTTATTGAATTTCCAGTCGAGTTGACTGACTTTTCGGCCTCCTTCTTC  >  CP009273/580635‑580933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑