New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 1282540209 (0.640)15 (0.050) 12/260 21.1 7.5% noncoding (153/171 nt) rttR rtT sRNA, processed from tyrT transcript
?CP009273 1283013 = 188 (0.660)noncoding (66/85 nt) tyrT tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 210 total aligned reads displayed.

GGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTT  >  CP009273/1282390‑1282690
                                                                                                                                                      |                                                                                                                                                      
ggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTTTTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATTTTTTATTGCGGATTCGCTTGAGATTTCTGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAtt                                                                                                                                                        <  1:1578287/151‑1 (MQ=14)
    gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTc                                                                                                                                                    <  2:3032732/151‑1 (MQ=255)
     ttGCCTGCGGCAACGCTCTCTCGCTGACGCTCTAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCa                                                                                                                                                   <  2:3872298/151‑1 (MQ=255)
     ttGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCa                                                                                                                                                   <  1:4757883/151‑1 (MQ=255)
      tGCCTGCGGCAACGCTCTCTCGCTGCCGCTCGAGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAg                                                                                                                                                  <  1:2209605/151‑1 (MQ=255)
        ccTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAgcg                                                                                                                                                <  1:3752240/151‑1 (MQ=255)
          tGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCt                                                                                                                                              <  1:2323394/151‑1 (MQ=255)
            cGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTACAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTgc                                                                                                                                            <  1:1771943/151‑1 (MQ=255)
              ggtaCGGTCTCTCGCTGACGCTCCCCCCGAACCTGTTTGGTAGCTTATCATCGGTCCCCGAATTGGCATATTCTTTGATTGCGTATTCGATTGAGAGTTCTGTGAATTTTGTAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTgcgc                                                                                                                                          <  2:2755008/148‑1 (MQ=9)
                     tctctcGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGc                                                                                                                                   >  1:999453/1‑151 (MQ=255)
                           tcTGACGCTCTTGCCGAACCGTTGTCCAAGCTTCTCATCCTTCCCCGCTTTGGCAGAATTTTTGATTGCGGATTCGATTGAGAGTTCTGGGACTTTTGAAAGTGATGGTGGTGGGGTAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCg                                                                                                                             <  2:151473/150‑1 (MQ=11)
                           gCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGCAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCg                                                                                                                             <  2:82584/151‑1 (MQ=255)
                            cTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGCAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCgg                                                                                                                            <  2:4297411/151‑1 (MQ=255)
                            cTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCAACCTTCCCCGGCTGGGCAGAAGATGTGTTTTAGGATTCGCTTGAGAGTTCAGGGACGTTTGAAAGTGCTGGTGGTGGGGGAAGGTTTACAAAGCCATGCGCGGTTCGCCCGTCgg                                                                                                                            >  2:2647881/1‑151 (MQ=255)
                             tGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGAGAGCTTCGcccaacagg                                                                                                                           >  1:3950014/1‑145 (MQ=255)
                             cgACGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCATAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCggg                                                                                                                           <  1:614405/150‑1 (MQ=255)
                              gACGCTCGAGCCGCACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGt                                                                                                                          <  2:3677891/151‑1 (MQ=255)
                              gACGCTCGAGCCGAACCTTCGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTAAGCGCTGCGCGCTTCGCCCTTCGGGt                                                                                                                          <  1:3185099/151‑1 (MQ=255)
                                cGCTCGAGCCTAACCTTGTTCTAAGCTTCTCATCCGTCACCGCTTGGGCAGACTATATCATTTCGGATTCGCTTGAGTGTTCCGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCg                                                                                                                        <  2:3086268/151‑1 (MQ=11)
                                cGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCg                                                                                                                        <  2:3286811/151‑1 (MQ=255)
                                cGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCg                                                                                                                        <  1:2785783/151‑1 (MQ=255)
                                  cTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCACCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAATCAGCGCTGCGCGCGTCGCCCTTCGGGTCGtt                                                                                                                      >  1:5091198/1‑151 (MQ=255)
                                      aGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGTATATTTGTTTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGAGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCt                                                                                                                  >  1:3832790/1‑151 (MQ=255)
                                      aGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCt                                                                                                                  >  2:4470746/1‑151 (MQ=255)
                                      aGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATACGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCt                                                                                                                  >  2:1714524/1‑151 (MQ=255)
                                        ccGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGCCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACACAGCGCTTCGCGCATCGCCCAACGGGTCGTTTCCTGc                                                                                                                >  1:2065115/1‑151 (MQ=14)
                                             ccTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTGCGGGTCGTTGCCTGCGGCaa                                                                                                           >  2:4485349/1‑151 (MQ=255)
                                              cTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGTTTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAAc                                                                                                          >  1:1233930/1‑151 (MQ=255)
                                              cTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCGGCGGCAAc                                                                                                          >  1:605161/1‑151 (MQ=255)
                                                      aaGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCtctctc                                                                                                  >  1:4028177/1‑151 (MQ=40)
                                                       aGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCg                                                                                                 >  1:1546173/1‑151 (MQ=40)
                                                       aGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCg                                                                                                 >  2:3291637/1‑151 (MQ=40)
                                                            ctcctcCTTCCCCGCATGGGCAGATTATTAGATTGCGGAGTCGCTTGAGATTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGgc                                                                                            <  1:2855284/151‑1 (MQ=255)
                                                            ctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCATCGCCCTTCGGGACGTTGCCTGGGGCAACGATCTCTCGCTGgc                                                                                            >  2:2326895/1‑151 (MQ=255)
                                                            ctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGGGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGgc                                                                                            >  1:845177/1‑151 (MQ=255)
                                                             ggctcggtCCCCGCATGGGCAGATTATTTGATTGCGGATTCGCTAGAGAGTTCCGGGACTTTTGCAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGgcg                                                                                           <  1:3065012/144‑1 (MQ=14)
                                                               aTCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCt                                                                                         >  2:4160160/1‑151 (MQ=255)
                                                                tCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCGGCGGCAACGCTCTCTCGCTGGCGCTc                                                                                        >  2:458140/1‑151 (MQ=255)
                                                                ccggtCCCCGCTGGGGCAGAATTTAAGATTGCGTATTAGCTAGAGTGTTCCGGGATTTATGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTc                                                                                        <  1:366474/147‑1 (MQ=11)
                                                                 cggtCCCCGCCTTGGCAGACGCTTTTATTTGGGCTTCGGTTGAGTGTTCAGTGACGTATGCAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCg                                                                                       <  1:2467261/148‑1 (MQ=14)
                                                                  cTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGa                                                                                      >  1:4736494/1‑151 (MQ=255)
                                                                   ttCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCACTCTCGCTGGCGCTCGAg                                                                                     >  1:5242342/1‑151 (MQ=255)
                                                                    tCCACGCTTGGGCAGAATTTTTGATTGCGGATTCGCTTGAGCTTTCATGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGt                                                                                    <  2:176793/151‑1 (MQ=11)
                                                                     ccccGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGGGGCAACGCTCTCTCGCTTTCGCTCGAATc                                                                                   >  1:2610994/1‑151 (MQ=255)
                                                                      cccGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTTCCTGAGGCAACGCTCTCTCGCTTGCGCTCGAGTCg                                                                                  >  2:124013/1‑151 (MQ=255)
                                                                        cGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGaa                                                                                >  2:4260527/1‑151 (MQ=255)
                                                                          cATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCACTCTCGCTGGCGCTCGAGTCGAAcc                                                                              >  1:970131/1‑151 (MQ=255)
                                                                              gccAGATTTTTTGATTTCGGATTCGCTTGAGAGTTCTGGGACTTTAGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTgg                                                                          <  1:4043029/149‑1 (MQ=14)
                                                                                cAGATTTTTTGATTTCGGATTAGTTTGAGTTTTCCGGTACTTTTGAAAGAGATGGTGGTGGGGGAAGGTTTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTc                                                                        <  2:55854/151‑1 (MQ=11)
                                                                                 aGAATAGTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTTTCGCGCGAATCGAACCTTGGTCg                                                                       >  1:1441447/1‑151 (MQ=255)
                                                                                   aaTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCATCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGTCGAACCTTGGTCGaa                                                                     >  2:1996985/1‑151 (MQ=255)
                                                                                   aaTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTTGTCGaa                                                                     >  1:1104401/1‑151 (MQ=255)
                                                                                     tatTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCTCTAAGACCTTCTCCCAACGGTACGTTGCGAGCGGCAACGCGCTCTCGCTTTCGCACGAGTGGAACCTTGGTGGAAGc                                                                   >  2:3542833/1‑151 (MQ=14)
                                                                                       tttGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCtt                                                                 >  1:4727510/1‑151 (MQ=255)
                                                                                       tttGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGAGGCAACGATCTCTCGCTTTCGCTCGAATCGAACCTTTGTCGAAGGtt                                                                 >  2:3801390/1‑151 (MQ=14)
                                                                                         tGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGATCTCTCGCTGGCGCTCGAGTCGAACATTGGTCGAAGCTtct                                                               >  2:761226/1‑151 (MQ=255)
                                                                                          gATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGATTCGAACCTTCGTCGAAGCttaac                                                              >  2:3733368/1‑148 (MQ=255)
                                                                                            ttGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGACTGAGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCaa                                                            >  2:1924210/1‑150 (MQ=255)
                                                                                             tGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCGTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCGTGGTAGAAGCTTCTCATc                                                           >  2:4053091/1‑151 (MQ=255)
                                                                                               cGGCTTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCt                                                         <  1:3565679/151‑1 (MQ=255)
                                                                                                ggATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCACTCTAGCGGGCGCTCGAGTCGAACCGTGGTCGAAGCTTCTCAAccat                                                        >  1:4572635/1‑149 (MQ=14)
                                                                                                  aTTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCACCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCACTCTCGCGGGCGCTCGAGTCGTACCTTGGTCGTAGCTTCTCATCCTGcc                                                      >  1:3471852/1‑151 (MQ=14)
                                                                                                    tCGCTTGAGAGTTCAGGGACTTTTGAAAGAGATGGTGGTGGGGGAAGGATTACTCAGCGCTTCGCGCTTCGCCCTACGGGTCGTTGCCTGCGGCAACGCACTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTcacc                                                    >  2:3954338/1‑151 (MQ=255)
                                                                                                       cTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCAACCTTCCCCGCa                                                 >  1:3959250/1‑151 (MQ=255)
                                                                                                            gagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCGTGGTCGAAGCTTCTCAACCTTCCCCGCATGGGc                                            >  1:3969486/1‑151 (MQ=255)
                                                                                                              gTTCAGCGAATTTAGAAAGTGATTGGGGTTGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAg                                          <  1:1478260/151‑1 (MQ=14)
                                                                                                                tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTTCGGCAACGCTCTCTCGCTGGCGCGCGAGTCGAACCGTGGTCGAAGCTTCTCATCCTTCCCCGCCTGGGCCGat                                        >  1:4103237/1‑150 (MQ=14)
                                                                                                                tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCACTCGCTGGCGCTCGAGTCGAACCGTGGTCGAAGCTTCTCAACCAAACCCCCAAGGGCAGaa                                        >  1:7646/1‑151 (MQ=14)
                                                                                                                   tggACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAatat                                     <  1:1893943/150‑1 (MQ=38)
                                                                                                                    ggACGTTTGAAAGTGATGGTGGTGGGGGAAGGAGTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGGGGCAAAGCTCTCTCGCTGGCGCGCGAGTCGAACCTTTGGCGAAGCTTCTCATCCTTCCCCGCAGGGGGAGAATAtt                                    >  1:1038558/1‑151 (MQ=11)
                                                                                                                     gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAAAGCACTCTCGCGGGCGCTCGAGGCGTACCATGGTCGAATCTTATCATCCGACCCCGCATGGGGAGAatatat                                   >  1:4851266/1‑149 (MQ=11)
                                                                                                                        ttttGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGAGGCAACGCTCTCTCGCTTGCGCAAGAGTCGAACCATTGTCGAAGCTTATAAAACTTAACCCCATGGGCAGAAAATTTAAt                                >  1:1699148/1‑151 (MQ=11)
                                                                                                                         ttagcaaGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAAtt                               <  1:1871921/146‑1 (MQ=255)
                                                                                                                          caggaaGGGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTg                              <  2:4972230/147‑1 (MQ=18)
                                                                                                                          aaggaaGCGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTg                              <  1:3337211/147‑1 (MQ=14)
                                                                                                                           aggaaGCGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAat                                       <  1:3988591/138‑1 (MQ=1)
                                                                                                                             gaaGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCgg                           <  1:5210799/150‑1 (MQ=38)
                                                                                                                              aaGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCCAGTCGAACCTTGGTCGAAGCGTCTCAACCTTCCCCGCATGGGCAGAAGATTTAATTGCgca                          >  2:5142969/1‑149 (MQ=255)
                                                                                                                               agcgATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAAAGCGCTCTCGCTGGCGCTCCAGTCGAACCTTGGTCGTAGCATATAAAACTTACCCGCAAGGGCAGAATATTTAATTTCGGAt                         >  1:2007969/4‑151 (MQ=11)
                                                                                                                               aGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGATTAGAAACTTGGTCGAAGCGTCTCATACTTCCCCGCAGGGGCAGACTATTTAATTGCGGAt                         >  1:4925660/1‑151 (MQ=14)
                                                                                                                                gTGATGGTGGTGGGGGAAGGATTACTCTGCGCTGCGCGCTTCGCCCTTCGGGGCGTTGCCTGCGGCACCGCTCTCTCGCTGGCGCTCGAGTCGAACCGTGGTCGAAGCTGCTCATCCTTCCCCGCATGGGCAGTCTAGTGAATTGCGGCtt                        >  2:3205425/1‑151 (MQ=11)
                                                                                                                                 cgATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTaa                                 >  2:482083/2‑141 (MQ=11)
                                                                                                                                 cgATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTc                       <  1:4665068/150‑1 (MQ=14)
                                                                                                                                    tggtggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACTCTCTCACGCTGGCGCTCTAGTCTAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGtt                    <  2:4205487/151‑1 (MQ=255)
                                                                                                                                       tggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCGTGGTCGAAGCTTCTCATCCTTCCCCGCAGGGGCAGAATAGTTAATTGCGGATTCGGTggg                 >  1:2509623/1‑151 (MQ=255)
                                                                                                                                         gtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCGGCGGCAACGCTCGAACGCGGGCGCGCGAGTCGAACCGTGGTGGTAGCTTCTCATCCGTACCCCCCTCGGCACAATATTTGATTTCGGATTAGTTGGGaa               >  1:3702213/1‑151 (MQ=11)
                                                                                                                                          tggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCGGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAg              <  1:4468760/151‑1 (MQ=255)
                                                                                                                                            ggggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGtt            <  1:1720975/151‑1 (MQ=255)
                                                                                                                                             gggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTc           <  1:1380544/151‑1 (MQ=255)
                                                                                                                                             gggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGTTGGGGAGTTc           >  2:3387493/1‑151 (MQ=9)
                                                                                                                                              ggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCCGAATATTTAATTGCGGATTCGTGGGGAAGTTCa          >  2:3191954/1‑151 (MQ=255)
                                                                                                                                               gAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGATTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCTGATTCGTTGGGAAGTTCAg         <  2:4244486/151‑1 (MQ=255)
                                                                                                                                               gAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCCAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAg         <  2:2828146/151‑1 (MQ=255)
                                                                                                                                                aaGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAgg        <  1:4830250/151‑1 (MQ=255)
                                                                                                                                                aaGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCAAGTCGAACCGGGGTCGAAGCTTCTCATCCTTCCCCGCGTGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAgg        >  2:115323/1‑151 (MQ=255)
                                                                                                                                                 aGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCATCTCAGACTTCCCCGCATGGGCAGAATATTTAATTTCGGATTCGTTGGGACGTTAAggg       >  1:3384854/1‑151 (MQ=14)
                                                                                                                                                  ggATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGa      <  1:5256947/151‑1 (MQ=255)
                                                                                                                                                   gATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCATAAGATTTAAATGCGGATACGTTGGGACGGTAAGGGag     >  2:3624384/1‑150 (MQ=14)
                                                                                                                                                    aTTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACt    <  2:2609231/151‑1 (MQ=255)
                                                                                                                                                      tACTCAGCGCTGCGCGCTTCGCACTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGTAGCTTCTCATCCTTCCCCGCATGGGCAGAAGATTTATTTGCGGATTCGTTGGGAAGTTCAGGGACtgt  >  2:678087/1‑149 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
GGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTT  >  CP009273/1282390‑1282690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.