Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,222,6690TA22.8% 317.1 / 42.7 164intergenic (+125/+248)yohP/dusCuncharacterized protein/tRNA‑dihydrouridine synthase C
Reads supporting (aligned to +/- strand):  ref base T (50/75);  new base A (36/1);  total (88/76)
Fisher's exact test for biased strand distribution p-value = 3.92e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 167 total aligned reads displayed.

CTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGG  >  CP009273/2222519‑2222818
                                                                                                                                                        |                                                                                                                                                     
cttgCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAt                                                                                                                                                       <  2:3075154/148‑1 (MQ=255)
   gCGTATTTAAGATGATATTTTAAAATTCATTAATGTCATCAGGTCCGAAAAAAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATCTAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGGGGCCCATcgc                                                                                                                                                    >  2:751450/1‑151 (MQ=255)
   gCGGATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGACTATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATAACTGGCGCAAGTAGCGCG‑CA‑GGGGGCGGCCAATcgc                                                                                                                                                    >  2:751416/1‑151 (MQ=255)
      tagttAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATAGTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCAGTGCTTCATAGAATCACTGGCGCAAGGAGCGCG‑CC‑GGGGGCGGCCAATcggcgc                                                                                                                                                 >  2:3197301/4‑151 (MQ=255)
       aTTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATcgccgcc                                                                                                                                                >  2:1399081/1‑151 (MQ=255)
       aTTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATcgccgcc                                                                                                                                                <  1:3616372/151‑1 (MQ=255)
       aTTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATagccgcc                                                                                                                                                >  2:2964154/1‑151 (MQ=255)
       aTTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGGTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATcgccgcc                                                                                                                                                <  2:4925415/151‑1 (MQ=255)
             gatgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAACGCCGcccccccc                                                                                                                                          >  1:3478409/1‑151 (MQ=255)
              atgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑TGGGGCGGCCAATCGCCGCCGCCCCCt                                                                                                                                         >  2:664890/1‑151 (MQ=255)
              atgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGccccca                                                                                                                                         >  2:2796259/1‑150 (MQ=255)
               tgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATAGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑AGGGGCGGCCAATAGCCGCCGcccccag                                                                                                                                        >  2:3785109/1‑149 (MQ=255)
                gatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGGTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGc                                                                                                                                       <  2:641707/151‑1 (MQ=255)
                 atatTTTAAAATTACTTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACAGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCTCCCCCAGCa                                                                                                                                      >  2:4282001/1‑151 (MQ=255)
                 atatTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCAGCa                                                                                                                                      >  2:837025/1‑151 (MQ=255)
                    ttttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GC‑GGGGGCGGGCCAAAGCCGCCCCCCCCCCCAccc                                                                                                                                   >  1:1620553/1‑151 (MQ=255)
                    ttttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGGCAAAACCCCCCCCCCCCACCAccc                                                                                                                                   >  1:1381144/1‑151 (MQ=38)
                     tttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCCATCGCCGGCGCCCCCAGCAcccc                                                                                                                                  >  2:4396468/1‑151 (MQ=255)
                       tAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGCGCGCG‑CA‑GGGGGCGGCCAAAAGCCGCCCCCCCCAGCACCCCCg                                                                                                                                >  2:519454/1‑151 (MQ=255)
                       tAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCCAAAGCCCCCCCCCCCAGCAcccccc                                                                                                                                >  1:2384206/1‑150 (MQ=38)
                        aaaaTTCATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATAGAATCACTGGCGCAAGGAGCGCG‑GACGGGGGGGGCCAA‑CACCGCCCCCCCCCCAAccccccc                                                                                                                               >  1:1045490/1‑149 (MQ=255)
                        aaaaTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTACAGTCTCTCATCCTGTTGCGCTCCTGACATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCgg                                                                                                                               <  1:136805/151‑1 (MQ=255)
                            ttaattaaTGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GC‑GGGGGCGGCCAAAAGCCGCCCCCCCCAGCAcccccccgcac                                                                                                                           >  1:4287495/1‑145 (MQ=255)
                             taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAACGCCCCCGCCCCCCCCCCCCCCCGGcccg                                                                                                                          >  1:3299087/1‑148 (MQ=37)
                                ttaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCCG‑GGGGGGGGCCAAAGCCCCCCCCCCCACCCACCCCCggcgcgagg                                                                                                                        >  1:470292/1‑144 (MQ=255)
                                 taatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCAGCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GA‑GGGGGCGGCCAATCGCCGCCCCCCCCAGCACCCCCCGGCTCAGGCg                                                                                                                      >  2:1159175/1‑151 (MQ=37)
                                  aatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGa                                                                                                                     <  1:2621977/151‑1 (MQ=255)
                                  aatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAACGCCGCCGCCCCCAGCACCCCCGGGCGCTGGCGa                                                                                                                     >  2:2156100/1‑151 (MQ=255)
                                    tGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCCAACGCCCCCCCCCCCAGCACCCCCCCGCACAGGCGAAc                                                                                                                   >  1:849617/1‑151 (MQ=37)
                                    tGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAAc                                                                                                                   <  2:1468795/151‑1 (MQ=255)
                                     gTCATCAGGTCCGACAATAACGAGACTATTTCAGTCTCTCATCCTGGTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACa                                                                                                                  <  2:4596862/151‑1 (MQ=255)
                                     gTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACa                                                                                                                  <  2:3039988/151‑1 (MQ=255)
                                       catcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCGGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CC‑GGGGGCGGCCCAACGCCCCCGCCCCCAGCACCCCCCGGCGCTGGCGCACaaa                                                                                                                >  2:2445893/1‑151 (MQ=255)
                                        atcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GA‑GGGGGGGGCCAAAAACCGCCGCCCCCCGCCCCCCCCGGCGGAGGCGGACaaaa                                                                                                               >  1:5240287/1‑151 (MQ=255)
                                          caGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCAGCACCCCCGGGCTGATGCGAACAAAAta                                                                                                             >  2:164487/1‑150 (MQ=255)
                                             gTCCGAAAATAACGTGAATATGTCTGTCTCTCCTCCTGTTGGGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GG‑TGGGGCGGGCAAAAGCCGCCGCCCACGGCACCCCCGGGGGGGGGCTAACAAAATcgcg                                                                                                          >  2:2012839/1‑150 (MQ=255)
                                                  caaaTAACGAGAATATTTGAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCATTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgc                                                                                                     <  2:3081789/150‑1 (MQ=255)
                                                  aaaaTAACGAGAATATTTCTTTCTCTCATCCTGTTTCGCTCTTTTAATGACAATTGCTTCATTTAATCTATGTCTGAATGAGCGAG‑CA‑GTGGGAGGCCAATCGCCTCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgc                                                                                                     <  2:1412334/151‑1 (MQ=12)
                                                  aaaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATACTCACTGGCGCACGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgc                                                                                                     <  2:495356/151‑1 (MQ=255)
                                                   aaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgcg                                                                                                    <  2:2242045/151‑1 (MQ=255)
                                                   aaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgcg                                                                                                    <  1:1049012/151‑1 (MQ=255)
                                                     aTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGcgcg                                                                                                  <  2:1394669/151‑1 (MQ=255)
                                                       aaCGAGAATATTTCAGTCTCTCAGCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑AGGGGCGGCCAATAGGCGCCCCCCCCATCCCCCCCCGGCTCTGGCGAAAAAAATAACCGCATCGCGGt                                                                                                >  2:910770/1‑151 (MQ=255)
                                                        aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATACTCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTg                                                                                               <  1:411495/151‑1 (MQ=255)
                                                        aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCCATCGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCAGCGCGGTg                                                                                               >  2:4413993/1‑151 (MQ=255)
                                                        aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTg                                                                                               <  1:2145541/151‑1 (MQ=255)
                                                         cGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGGCCATAGCCCCCGCCCCCAGCACCCCCGGGCACTGGCGAACAAAAACGCCGCTGCGCGGTGc                                                                                              >  2:3288873/1‑151 (MQ=21)
                                                           agaATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑GA‑GGGGGCGGCCAAAAGCCCCCCCCCCCAGCACCCCCCGGCTCAGGGGAAAAAAAACTCCCCCGCGCgggtgcc                                                                                            >  1:3889920/1‑146 (MQ=255)
                                                             aaTATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAACGCCCCCCCCCCCAGCACCCCCCGGCGCATGCGAACAAAAAACCCCCAGCCCGGTGcccac                                                                                          >  2:2694874/1‑149 (MQ=21)
                                                              atatTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCg                                                                                         <  1:2866068/151‑1 (MQ=255)
                                                               tatTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATATCCGCCCCCCCCTGCACCCCCGGGCTCAGGCGAACCAAATCGCCGCAGCGCGGTGCCCACgg                                                                                        >  2:4062020/1‑151 (MQ=18)
                                                                   tCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATACTCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTa                                                                                    <  1:1630569/151‑1 (MQ=255)
                                                                    cAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAAACCCCCCCCCCCCAGCACCCCCCGGCTCAGGCGCACAAAATAGCCGCAGCGCGGTGCCCACGGCatat                                                                                   >  2:4133841/1‑151 (MQ=18)
                                                                     aGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGTAGCGCG‑CA‑GGGGGCGGCCAATCGCCGGCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCGGCGCGGTGCCCACGGCTTATc                                                                                  >  2:591719/1‑151 (MQ=255)
                                                                       tctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCCAAAGCCGCCGCCCCCTGCCCCCCCGGGCTCTGGCGAACAAAATCGCCCCAGCGCGGTGCCCTCGGCTTAtaac                                                                                >  2:3717550/1‑148 (MQ=18)
                                                                        ctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CC‑GGGGGCGGCCAATCGCCCCCCCCCCCAGCACCCCCCGGCTCAGGCGAACAAAAAAGCCGCAGCGCGGTGCCCACGGCGTaaacca                                                                               >  2:4330595/1‑146 (MQ=255)
                                                                        ctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATAGCCGCCGCCCCCTGCACCCCCGGGCGCAGGCGAACAAAATAGCCCCTGCGCGGTGCCCTAGGCTTGTACCt                                                                               >  2:4333528/1‑151 (MQ=18)
                                                                         tctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAACGCCGCCCCCCCCTGCACCCCCGGGGTATGGCGAAAAAAATCGCCCCTGCGCGGTGCCCTCGGCGAATACCtt                                                                              >  2:4535555/1‑151 (MQ=18)
                                                                          ctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa                                                                             <  1:4086023/151‑1 (MQ=255)
                                                                          ctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATAGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCGCGGCATATACCGTa                                                                             >  2:5262333/1‑151 (MQ=18)
                                                                                  gTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTAcc                                                                     <  2:3623167/151‑1 (MQ=255)
                                                                                     gcgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCggg                                                                  <  2:737603/151‑1 (MQ=255)
                                                                                      cgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGt                                                                 <  1:4686238/151‑1 (MQ=255)
                                                                                      cgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAAAACCCGCCGCCCCCAGCACCCCCCGGCACAGGCGAACAAAAAAGCCCCTGCCCGGTGCCCGCGGCTTAAACCGTACGGCGACCCGGt                                                                 >  2:529696/1‑151 (MQ=17)
                                                                                       gcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTc                                                                <  1:4161600/151‑1 (MQ=255)
                                                                                        cTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTca                                                               <  2:3859637/151‑2 (MQ=255)
                                                                                         tCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCgg                                                              <  1:306788/151‑1 (MQ=255)
                                                                                         tCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCgg                                                              <  1:2828352/151‑1 (MQ=255)
                                                                                         tCCTGTCATGTGCATTGCTGCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACACAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCgg                                                              <  1:5201934/151‑1 (MQ=255)
                                                                                           cTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgc                                                            <  1:310287/151‑1 (MQ=255)
                                                                                                aTGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAg                                                       <  1:262100/151‑1 (MQ=255)
                                                                                                 tgtgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAgg                                                      <  1:2706371/151‑1 (MQ=255)
                                                                                                   tgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTa                                                    <  2:4948231/151‑1 (MQ=255)
                                                                                                         gCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑TGGGGCGGCCAAAAGCCGCCCCCCCCAGCACCCCCGCGCTCAGGCGAACAAAAACGCCCCAGCGCGGTGCCCACGGCGTATACCTTAACGCTACCGGGTCGGGCGCGAGGTACCAAcc                                              >  2:2554735/1‑151 (MQ=14)
                                                                                                            tCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTg                                           <  2:3290649/151‑1 (MQ=38)
                                                                                                             cATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGt                                          <  1:1876653/151‑1 (MQ=38)
                                                                                                               tataATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTaa                                        <  2:1492779/151‑1 (MQ=35)
                                                                                                                ataATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAAACGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTaaa                                       <  2:4788285/151‑1 (MQ=25)
                                                                                                                  aaTCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAc                                     <  1:3650750/151‑1 (MQ=33)
                                                                                                                     cACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAcgcg                                  <  2:4019201/151‑1 (MQ=31)
                                                                                                                        tGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGccc                               <  2:3375895/151‑1 (MQ=31)
                                                                                                                           cgcAAGGAGCGCG‑CA‑GGGGGCCGCCCATCCCCGCCCCCCCCAGCACCCCCGGGCTCAGGCGAACAAAAACGCCGCTGCGCGGTGCCCACGGCGTATCCCTTTCGGCTACCGGGGCGGGCCGGAGGTCACATCCCTGTTAAACGCGcccgcg                            >  2:4365215/1‑148 (MQ=11)
                                                                                                                            gcAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAg                           <  2:2191155/151‑1 (MQ=31)
                                                                                                                            gcAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAg                           <  1:3541818/151‑1 (MQ=31)
                                                                                                                                  aGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                     <  1:4777052/151‑1 (MQ=31)
                                                                                                                                   gcgcg‑cA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACAt                    <  1:953656/151‑1 (MQ=31)
                                                                                                                                    cgcg‑cA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATc                   >  1:4356074/1‑151 (MQ=31)
                                                                                                                                    cgcg‑cA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCACTGTAAAACGCGCCCTCAGCCCACATc                   >  2:354031/1‑151 (MQ=14)
                                                                                                                                      cg‑cA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCa                 >  1:1264702/1‑151 (MQ=31)
                                                                                                                                       g‑cA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCag                >  2:2188098/1‑150 (MQ=14)
                                                                                                                                          a‑GGGTGCGGCCAAACGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGAGCGGTGCCCTCGGCTTATCCCTTACGGCTACCTGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCTtgt              <  2:1844069/151‑1 (MQ=255)
                                                                                                                                          a‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtgt              <  1:2213041/151‑1 (MQ=31)
                                                                                                                                          a‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtgt              >  2:4487866/1‑151 (MQ=31)
                                                                                                                                            gggggCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTACAACGCGCCCTCAGCCCACATCCAtgtg             >  1:4588934/1‑151 (MQ=14)
                                                                                                                                             ggggCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTgg            <  1:3790823/151‑1 (MQ=31)
                                                                                                                                                gcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCt         <  1:898597/151‑1 (MQ=31)
                                                                                                                                                 cggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTg        >  2:681242/1‑151 (MQ=31)
                                                                                                                                                 cggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTg        >  1:1506444/1‑151 (MQ=31)
                                                                                                                                                  ggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGc       >  2:706690/1‑151 (MQ=31)
                                                                                                                                                     cAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGcccc    >  1:3091313/1‑151 (MQ=31)
                                                                                                                                                        |                                                                                                                                                     
CTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCG‑CA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGG  >  CP009273/2222519‑2222818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑