Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,222,6830TA25.2% 303.1 / 42.0 164intergenic (+139/+234)yohP/dusCuncharacterized protein/tRNA‑dihydrouridine synthase C
Reads supporting (aligned to +/- strand):  ref base T (37/79);  new base A (39/0);  total (85/79)
Fisher's exact test for biased strand distribution p-value = 9.71e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 167 total aligned reads displayed.

ATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCC  >  CP009273/2222533‑2222833
                                                                                                                                                       |                                                                                                                                                      
 tgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAAAAGCCGCCGCCCCCTg                                                                                                                                                       >  1:850854/1‑151 (MQ=255)
  gatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGGTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGc                                                                                                                                                      <  2:641707/151‑1 (MQ=255)
   atatTTTAAAATTACTTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACAGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCTCCCCCAGCa                                                                                                                                                     >  2:4282001/1‑151 (MQ=255)
   atatTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCAGCa                                                                                                                                                     >  2:837025/1‑151 (MQ=255)
       tttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGA‑GGGGGCGGGCCAACCcccccgccccccgccaccc                                                                                                                                                 >  1:1617839/1‑146 (MQ=255)
          aaaaTTCATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATAGAATCACTGGCGCAAGGAGCGCGGACGGGGGGGGCCAA‑CACCGCCCCCCCCCCAAccccccc                                                                                                                                              >  1:1045490/1‑149 (MQ=255)
          aaaaTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTACAGTCTCTCATCCTGTTGCGCTCCTGACATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCgg                                                                                                                                              <  1:136805/151‑1 (MQ=255)
          aaaaTTAATTAAGGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCAGCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCgg                                                                                                                                              <  2:2122610/151‑1 (MQ=255)
           aaaTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAAACGCCGCCGCCCCCAGCACCCCCggg                                                                                                                                             >  2:1679750/1‑151 (MQ=255)
              ttaattaaTGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGC‑GGGGGCGGCCAAAAGCCGCCCCCCCCAGCAcccccccgcac                                                                                                                                          >  1:4287495/1‑145 (MQ=255)
               taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAAACGCCCCCGCCCCCCCCCCCCCCCGGcccg                                                                                                                                         >  1:3299087/1‑148 (MQ=37)
                aattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCG‑GGGGGCGGCCAAACGCCCCCCCCCCCAGCACCCCCCGGcgcgg                                                                                                                                        >  1:3856542/1‑147 (MQ=255)
                 attaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTgg                                                                                                                                       <  1:2363559/151‑1 (MQ=255)
                   taatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCAGCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGA‑GGGGGCGGCCAATCGCCGCCCCCCCCAGCACCCCCCGGCTCAGGCg                                                                                                                                     >  2:1159175/1‑151 (MQ=37)
                    aatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGa                                                                                                                                    <  1:2621977/151‑1 (MQ=255)
                    aatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTACTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGGGGCCAAAAGCCGCCGCCCCCAGCACCCCCCGGCTCTGGCGa                                                                                                                                    >  2:2396434/1‑151 (MQ=37)
                      tGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCCAACGCCGCCGCCCCCGGCACCCCCGGGCTCTGGCCaaa                                                                                                                                  >  2:672820/1‑150 (MQ=255)
                       gTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACa                                                                                                                                 <  2:3039988/151‑1 (MQ=255)
                          atcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGA‑GGGGGGGGCCAAAAACCGCCGCCCCCCGCCCCCCCCGGCGGAGGCGGACaaaa                                                                                                                              >  1:5240287/1‑151 (MQ=255)
                            caGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATc                                                                                                                            <  2:2593962/151‑1 (MQ=255)
                             aGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATcg                                                                                                                           <  2:5012546/151‑1 (MQ=255)
                               gTCCGAAAATAACGCGAATATTTCAGTCTCTCATCCTGGTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATcgcc                                                                                                                         <  1:4774563/151‑1 (MQ=255)
                                  cGAAAATAACGCTAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCACGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCt                                                                                                                      <  1:1239322/151‑1 (MQ=255)
                                    caaaTAACGAGAATATTTGAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCATTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgc                                                                                                                    <  2:3081789/150‑1 (MQ=255)
                                    aaaaTAACGAGAATATTTCTTTCTCTCATCCTGTTTCGCTCTTTTAATGACAATTGCTTCATTTAATCTATGTCTGAATGAGCGAGCA‑GTGGGAGGCCAATCGCCTCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgc                                                                                                                    <  2:1412334/151‑1 (MQ=12)
                                     aaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTgcg                                                                                                                   <  1:1049012/151‑1 (MQ=255)
                                       aTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGcgcg                                                                                                                 <  2:1394669/151‑1 (MQ=255)
                                         aaCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTTCATTGCTTCATATAATCACAGGCGCAAGGAGCGCGAT‑GGGGGCGGACAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGt                                                                                                               <  2:553904/151‑1 (MQ=255)
                                         aaCGAGAATATTTCAGTCTCTCAGCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑AGGGGCGGCCAATAGGCGCCCCCCCCATCCCCCCCCGGCTCTGGCGAAAAAAATAACCGCATCGCGGt                                                                                                               >  2:910770/1‑151 (MQ=255)
                                          aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATACTCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTg                                                                                                              <  1:411495/151‑1 (MQ=255)
                                          aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCCATCGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCAGCGCGGTg                                                                                                              >  2:4413993/1‑151 (MQ=255)
                                          aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTg                                                                                                              <  1:2145541/151‑1 (MQ=255)
                                           cGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGGCCATAGCCCCCGCCCCCAGCACCCCCGGGCACTGGCGAACAAAAACGCCGCTGCGCGGTGc                                                                                                             >  2:3288873/1‑151 (MQ=21)
                                             agaATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGA‑GGGGGCGGCCAAAAGCCCCCCCCCCCAGCACCCCCCGGCTCAGGGGAAAAAAAACTCCCCCGCGCgggtgcc                                                                                                           >  1:3889920/1‑146 (MQ=255)
                                             agaATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGccc                                                                                                           <  2:3299637/151‑1 (MQ=255)
                                             agaATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGAACAAAAACGCCCCTGCGCCGTGccc                                                                                                           >  2:3971073/1‑151 (MQ=255)
                                               aaTATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAAACGCCCCCCCCCCCAGCACCCCCCGGCGCATGCGAACAAAAAACCCCCAGCCCGGTGcccac                                                                                                         >  2:2694874/1‑149 (MQ=21)
                                                atatTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCg                                                                                                        <  1:2866068/151‑1 (MQ=255)
                                                atatTTCAGTCTCTCATCCTGTTGCGCTCATGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCg                                                                                                        <  2:3694893/151‑1 (MQ=255)
                                                     tCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATACTCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTa                                                                                                   <  1:1630569/151‑1 (MQ=255)
                                                      cAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAAAACCCCCCCCCCCCAGCACCCCCCGGCTCAGGCGCACAAAATAGCCGCAGCGCGGTGCCCACGGCatat                                                                                                  >  2:4133841/1‑151 (MQ=18)
                                                         tctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCCAAAGCCGCCGCCCCCTGCCCCCCCGGGCTCTGGCGAACAAAATCGCCCCAGCGCGGTGCCCTCGGCTTAtaac                                                                                               >  2:3717550/1‑148 (MQ=18)
                                                          ctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATAGCCGCCGCCCCCTGCACCCCCGGGCGCAGGCGAACAAAATAGCCCCTGCGCGGTGCCCTAGGCTTGTACCt                                                                                              >  2:4333528/1‑151 (MQ=18)
                                                           tctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAAACGCCGCCCCCCCCTGCACCCCCGGGGTATGGCGAAAAAAATCGCCCCTGCGCGGTGCCCTCGGCGAATACCtt                                                                                             >  2:4535555/1‑151 (MQ=18)
                                                            ctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATAGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCGCGGCATATACCGTa                                                                                            >  2:5262333/1‑151 (MQ=18)
                                                                     ttGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCg                                                                                   <  1:4273804/151‑1 (MQ=255)
                                                                     ttGCGCTCCTGTCATGTGCATTGATTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGGAAAAACCCGCCCCCCCCGTCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGGCCCCGGCTGATACCTTACGGCtgacg                                                                                   >  2:4739948/1‑147 (MQ=17)
                                                                       gcgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCggg                                                                                 <  2:741156/151‑1 (MQ=255)
                                                                        cgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGt                                                                                <  1:4686238/151‑1 (MQ=255)
                                                                        cgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAAAACCCGCCGCCCCCAGCACCCCCCGGCACAGGCGAACAAAAAAGCCCCTGCCCGGTGCCCGCGGCTTAAACCGTACGGCGACCCGGt                                                                                >  2:529696/1‑151 (MQ=17)
                                                                          cTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTca                                                                              <  2:3859637/151‑2 (MQ=255)
                                                                           tCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCgg                                                                             <  1:306788/151‑1 (MQ=255)
                                                                             cTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgc                                                                           <  1:310287/151‑1 (MQ=255)
                                                                              tGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgcg                                                                          <  1:4371029/151‑1 (MQ=255)
                                                                                 cATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAAACGCCCCCCCCCCCAGCAACCCCCCGCTCTGGCGAACAAAAAAGCCGCGGCGCGGTGCCCGCGGCGTATCCCGTACGGCTACCGGGGCGGGcgcgg                                                                       >  2:4376226/1‑150 (MQ=17)
                                                                                  aTGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCCATACCCCCCCCCCCCAGCCCCCCCGGGCGCAGGCGAACAAAAAAGCCGCTGCGCGGTGCCCACCGCGGATCCCGTAAGGCTACCGGGGAGGGGGCGAg                                                                      >  2:2192319/1‑151 (MQ=12)
                                                                                   tgtgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑AGGGGCGGCCAAAAGCCGCCCCCCCCAGCACCCCCCGGCTCTGGCGAAAAAAATCGCCCCTTCGCGGTGCCCACGGCATAAACCATAAGGCAACCCGGTAGGGCGCGAgg                                                                     >  2:4297557/1‑151 (MQ=14)
                                                                                     tgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTa                                                                   <  2:4948231/151‑1 (MQ=255)
                                                                                           gCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑TGGGGCGGCCAAAAGCCGCCCCCCCCAGCACCCCCGCGCTCAGGCGAACAAAAACGCCCCAGCGCGGTGCCCACGGCGTATACCTTAACGCTACCGGGTCGGGCGCGAGGTACCAAcc                                                             >  2:2554735/1‑151 (MQ=14)
                                                                                               cATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGt                                                         <  1:1876653/151‑1 (MQ=38)
                                                                                                 tataATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTaa                                                       <  2:1492779/151‑1 (MQ=35)
                                                                                                  ataATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAAACGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTaaa                                                      <  2:4788285/151‑1 (MQ=25)
                                                                                                    aaTCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAc                                                    <  1:3650750/151‑1 (MQ=33)
                                                                                                       cACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAcgcg                                                 <  2:4019201/151‑1 (MQ=31)
                                                                                                          tGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGccc                                              <  2:3375895/151‑1 (MQ=31)
                                                                                                           ggCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCt                                             <  1:3586124/151‑1 (MQ=31)
                                                                                                            gcgcAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTc                                            <  2:737313/151‑1 (MQ=31)
                                                                                                             cgcAAGGAGCGCGCA‑GGGGGCCGCCCATCCCCGCCCCCCCCAGCACCCCCGGGCTCAGGCGAACAAAAACGCCGCTGCGCGGTGCCCACGGCGTATCCCTTTCGGCTACCGGGGCGGGCCGGAGGTCACATCCCTGTTAAACGCGcccgcg                                           >  2:4365215/1‑148 (MQ=11)
                                                                                                              gcAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAg                                          <  1:3541818/151‑1 (MQ=31)
                                                                                                                    aGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                    <  1:4777052/151‑1 (MQ=31)
                                                                                                                     gcgcgcA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACAt                                   <  1:953656/151‑1 (MQ=31)
                                                                                                                      cgcgcA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCACTGTAAAACGCGCCCTCAGCCCACATc                                  >  2:354031/1‑151 (MQ=14)
                                                                                                                        cgcA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCAGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCACAGCCCACAACCa                                >  1:1264814/1‑151 (MQ=9)
                                                                                                                         gcA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCag                               >  2:2188098/1‑150 (MQ=14)
                                                                                                                          cA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtg                              >  1:5179953/1‑151 (MQ=31)
                                                                                                                           a‑GGGTGCGGCCAAACGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGAGCGGTGCCCTCGGCTTATCCCTTACGGCTACCTGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCTtgt                             <  2:1844069/151‑1 (MQ=255)
                                                                                                                           a‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtgt                             <  1:2213041/151‑1 (MQ=31)
                                                                                                                             gggggCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTACAACGCGCCCTCAGCCCACATCCAtgtg                            >  1:4588934/1‑151 (MQ=14)
                                                                                                                                 gcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCt                        <  2:2160926/151‑1 (MQ=31)
                                                                                                                                 gcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCt                        <  1:2523205/151‑1 (MQ=31)
                                                                                                                                  cggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTg                       >  2:681242/1‑151 (MQ=31)
                                                                                                                                  cggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTg                       >  1:1506444/1‑151 (MQ=31)
                                                                                                                                  cggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAAACGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGACCACATCCATGTGGGCTg                       <  1:835539/151‑1 (MQ=14)
                                                                                                                                      cAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGcccc                   >  1:3091313/1‑151 (MQ=31)
                                                                                                                                       aaTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCg                  >  1:2801561/1‑151 (MQ=31)
                                                                                                                                        aTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCgg                 >  1:2649912/1‑151 (MQ=31)
                                                                                                                                          cgccgccgcCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGcc               >  1:4511529/1‑151 (MQ=31)
                                                                                                                                           gccgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACTGCTACCGGGTCGGGCGCGAGGTACCATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCt              >  2:2559024/1‑151 (MQ=14)
                                                                                                                                           gccgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCt              >  2:2944312/1‑151 (MQ=31)
                                                                                                                                             cgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTc            <  2:4448989/151‑1 (MQ=31)
                                                                                                                                             cgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTc            >  2:4450811/1‑151 (MQ=31)
                                                                                                                                              gccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCa           <  1:288395/151‑1 (MQ=31)
                                                                                                                                              gccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCa           <  2:507382/151‑1 (MQ=31)
                                                                                                                                              gccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCa           >  2:2310158/1‑151 (MQ=31)
                                                                                                                                                   ccccTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTGACGGCTACCGGGTCGGGAGGGAGGTTACATCCCTGTTATACGCGCCCTCAGCCCACATGCTGGTGGGGTGCGCGGGCCGTCTGGGac      >  2:762845/1‑150 (MQ=11)
                                                                                                                                                    cccTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCACCGGCCTTCAGGGacc     >  2:3132543/1‑149 (MQ=14)
                                                                                                                                                    cccTGCACCCCCGGGCTCTGGCGAACAAAAGCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGCGCGCGAGGGAACATCCCTGTACAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAAc     <  1:2081010/151‑1 (MQ=9)
                                                                                                                                                     ccTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACg    <  1:991543/151‑1 (MQ=31)
                                                                                                                                                      cTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGc   <  1:141549/151‑1 (MQ=31)
                                                                                                                                                       tGCACCACCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGcc  >  2:2982089/1‑151 (MQ=14)
                                                                                                                                                       |                                                                                                                                                      
ATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCC  >  CP009273/2222533‑2222833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑