New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP058219 = 8404006 (0.790)12 (0.000) 11/248 NT 0.30% intergenic (+91/‑136) HW372_RS24205/HW372_RS24210 DUF4868 domain‑containing protein/MobC family plasmid mobilization relaxosome protein
?NZ_CP058219 845 = 3840 (0.760)intergenic (+96/‑131) HW372_RS24205/HW372_RS24210 DUF4868 domain‑containing protein/MobC family plasmid mobilization relaxosome protein
Rejected: Frequency below/above cutoff threshold.

CTACCAGTACCACTTCGGATTCCTCTTCCGCTGCCGTGTGAGACAAAACAACCTATATCAGATAACAGCCCTGCTTTTGCGGGGCTTTTTGTTTGTGCGTGATGCGACCTCGATGTACGATAGATGCTGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP058219/709‑840
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGTACACACAGCGTCCCCTCTTCGAGGTGCCGTCTGTGACTGTTTCAGGGGGCTCGCCGCCCCCCGAAACCCCTTGCATCCACTGCGAAAATTCGCACTTTGGGTGCGAAACTTTCTCAGCGGATTCTCATGGAAAA  >  NZ_CP058219/845‑983
                                                                                                                                                                                                                                                                               
CTACCAGTACCACTTCGGATTCCTCTTACGCTGCCGTGTGAGACAAAACAACCTATATCAGATAACAGCCCTGCTTTTGCGGGGCTTTTTGTTTTTGCGTGATGCGACCTCGATGTACGATAGATGCTGTACCCAGTACA                                                                                                                                     >  8:297692/1‑140
  ACCAGTACCACTTCGGATTCCTCTTCCGCTGCCGTGTGAGACAAAACAACCTATATCAGATAACAGCCCTGCTTTTGCGGGGCTTTTTGTTTGTGAGTGCTGCTCCCTCGATGTACGATAGATGCTGTACCCAGTACA                                                                                                                                     >  6:315522/1‑138
         CCACTTCGGATTCCTCTTCCGCTGCCGTGTGAGACAAAACAACCTATATCAGATAACAGCCCTGCTTTTGCGGGGCTTTTTGTTTGTGCGTGATGCGACCTCGATGTACGATAGATGCTGTACCCAGTACACACAGCG                                                                                                                              >  2:10649/1‑138
         CCACTTCGGATTCCTCTTCCGCTGCCGTGTGAGACAAAACAACCTATATCAGATAACAGCCCTGCTTTTGCGGGGCTTTTTGTTTGTGCGTGATGCGACCTCGATGTACGATAGATGCTGTACCCAGTACACACAGCG                                                                                                                              >  3:899244/1‑138
              TCGGATTCCTCTTCCGCTGCCGTGTGAGACAAAACAACCTATATCAGATAACAGCCCTGCTTTTGCGGGGCTTTTTGTTTGTGCGTGATGCGACCTCGATGTACGATAGATGCTGTACCCAGTACACACAGCGTCCCC                                                                                                                         >  4:18554/1‑138
                                 CCGTGTGAGACAAAACAACCTATATCAGATAACAGCCCTGCTTTTGCGGGGCTTTTTGTTTGTGCGTGATGCGACCTCGATGTACGATAGATGCTGTACCCAGTACACACAGCGTCCCCTCTTCGAGGTGCCGTCTGT                                                                                                      <  2:807995/138‑1
                                                   CCTATATCAGATAACAGCCCTGCTTTTGCGGGGCTTTTTGTTTGTGCGTGATGCGACCTCGATGTACGATAGATGCT‑‑‑‑CCAGTACACACAGCGTCCCCTCTTCGAGGTGCCGTCTGTGACTGTTTCAGGGGGCTCGCCG                                                                                <  3:279218/138‑1
                                                                 CAGCCCTGCTTTTGCGGGGCTTTTTGTTTGTGCGTGATGCGACCTCGATGTACGATAGATGCTGTACCCAGTACACACAGCGTCCCCTCTTCGAGGTGCCGTCTGTGACTGTTTCAGGGGGCTCGCCGCCCCCCGAAAC                                                                     >  7:597003/1‑139
                                                                 CAGCCCTGCTTTTGCGGGGCTTTTTGTTTGTGCGTGATGCGACCTCGATGTACGATAGATGCTGTACCCAGTACACACAGCGTCCCCTCTTCGAGGTGCCGTCTGTGACTGTTTCAGGGGGCTCGCCGCCCCCCGAAAC                                                                     <  8:597003/139‑1
                                                                      CTGCTTTTGCGGGGCTTTTTGTTTGTGCGTGATGCGACCTCGATGTACGATAGATG‑‑‑‑‑‑CCAGTACACACAGCGTCCCCTCTTCGAGGTGCCGTCTGTGACTGTTTCAGGGGGCTCGCCGCCCCCCGAAACCCCTTGCATC                                                           >  2:307417/1‑138
                                                                                         TGTTTGTGCGTGATGCGACCTCGATGTACGATAGATGCTGTACCCAGTACACACAGCGTCCCCTCTTCGAGGTGCCGTCTGTGACTGTTTCAGGGGGCTCGCCGCCCCCCGAAACCCCTTGCATCCACTGCGAAAATT                                              <  6:1270147/138‑1
                                                                                                  GTGATGCGACCTCGATGTACGATAGATG‑‑‑‑‑CCCAGTACACACAGCGTCCCCTCTTCGAGGTGCCGTCTGTGACTGTTTCAGGGGGCTCGCCGCCCCCCGAAACCCCTTGCATCCACTGCGAAAATTCGCACTTTGGGTGC                                <  4:486215/138‑1
                                                                                                                                   CCCAGTACTCACAGCGTACCCTCTTCGAGGTGCCGGCGGTGACTGTTTCAGGGGGCTCGCCGCCCCCCGAAACGCCTTGCATCCACTGCGAAAATTCGCACTTTGGGTGCGAAACTTTCTCAGCGGATTCTCATGGAA    <  5:989054/138‑1
                                                                                                                                   CCCAGTACACACCGCGTCCCCTCTTCGAGGTGACGTCTGTGACTGTTTAAGGCGGATCGCCGCCCACCGAAACCCCTTGCATCCACTTCGAAAATTCGCACTTTGGGTGCGAAACTTTCTCAGCTGATTCTCATGGAAAA  <  8:602133/140‑1
                                                                                                                                   CCCAGTACACACAGCGTCCGCTGTTCGAGGTGCCGTCTGTGACTGTTTCAGGGGGCTCGCCGCCCCCCGAAACCCCTTGCATCCACTGCGAATTTTCGCACTTTGGGTGCGAAACTTTCTCAGCGGATTCTCATGGAA    <  3:220333/138‑1
                                                                                                                                   CCCAGGACACACAGCGTCCCCTCTTCGAGGTGCCGGCTGTGACTGTTTCAGGGGGCTCGCCGCCCCCCGAAACCCCTTGCATCCACTGCGAAAATTCGCACTTTGGGTGCGAAACTTTCTCAGCGGATTCTCATGGAAAA  <  8:783751/140‑1
                                                                                                                                                                                                                                                                               
CTACCAGTACCACTTCGGATTCCTCTTCCGCTGCCGTGTGAGACAAAACAACCTATATCAGATAACAGCCCTGCTTTTGCGGGGCTTTTTGTTTGTGCGTGATGCGACCTCGATGTACGATAGATGCTGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP058219/709‑840
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGTACACACAGCGTCCCCTCTTCGAGGTGCCGTCTGTGACTGTTTCAGGGGGCTCGCCGCCCCCCGAAACCCCTTGCATCCACTGCGAAAATTCGCACTTTGGGTGCGAAACTTTCTCAGCGGATTCTCATGGAAAA  >  NZ_CP058219/845‑983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.