| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP022686 | 1,392,487 | A→C | 7.1% | T43P (ACG→CCG) | lhgO → | L‑2‑hydroxyglutarate oxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP022686 | 1,392,487 | 0 | A | C | 7.1% | 359.9 / 2.6 | 205 | T43P (ACG→CCG) | lhgO | L‑2‑hydroxyglutarate oxidase |
| Reads supporting (aligned to +/- strand): ref base A (84/98); new base C (2/18); total (86/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.57e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 210 total aligned reads displayed.
AGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCATTCGCTATGACAACTG > NZ_CP022686/1392348‑1392620 | tggAATTGAGCGGTTGTATGATTTTGTGATTATTGGCGGCGGAATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGa < 8:37766/139‑1 (MQ=255)tggAATTGAGCGGATGTATGATTTTTTGATTTTTGGCGGCGGCATCATCGGCATGTCGACCGCCATGAAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGa < 7:287274/139‑1 (MQ=255)tggAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGTAAAAAGAGTCCGGCCCGGCCTGTCACCAGa < 8:741493/139‑1 (MQ=255) taaTTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTGGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGa < 2:581725/137‑1 (MQ=255) aaTTGATCCGATGAATGATTTTGTGATGATTGCCGGCGGCATCAGCGTCATGTCGACCGCCATGCAACTGATTGCTGTTTATCCGGATGCCCGAATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGAc < 2:1385626/138‑1 (MQ=255) ttGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGc > 4:1283467/1‑140 (MQ=255) ttGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTCTCACCAGACGGGc > 4:301421/1‑140 (MQ=255) gAGCGGATGTATGATTTTGTGATTATTGTCGGCGGCATCATCTGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGc > 6:1013459/1‑138 (MQ=255) gAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGCCCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGc > 6:254596/1‑138 (MQ=255) taTGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGGTGTTTATCCGGAGGCCCGCATGGCGTTGCTGGAAAAAGAGTCGGGCCCGGCCTGTCACCAGACGGGCCacaa < 1:1140933/137‑1 (MQ=255) taTGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTAACCAGACGGGCCacaaca < 3:911797/139‑1 (MQ=255) gATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGAGTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCacaa < 6:896420/138‑1 (MQ=255) gATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGAAACTGATTGATGTTTATCCTGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCacaa < 6:219857/138‑1 (MQ=255) gATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCAGGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGTAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCacaa < 1:1232982/138‑1 (MQ=255) gATGTATGATTTTGTGATTATTGGCGGCGGCATCATAGGCATGTCGACCGCCATGGAACTGATTGATTTTTATCCGTATGCCCGCATTGCGTTGATGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCacaaca > 4:1210334/1‑140 (MQ=255) gATGTATGATTTTGGGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCACACGGGCCacaa < 6:1373710/138‑1 (MQ=255) ttGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAg < 3:872614/139‑1 (MQ=255) gtGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGTGTCCGGCCCGGCCTGTCACCAGACGGGCCacaac < 1:1191894/137‑1 (MQ=255) aTGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAg > 3:1078125/1‑140 (MQ=255) tGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCacaaca > 1:262234/1‑138 (MQ=255) gTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAg > 2:458366/1‑138 (MQ=255) attaTTTTGTGATTTTTGGCGGCGGAATCTTCGGCTTGTCGACGGCAATGCAACTGTTTGATTTTTATCCGGATGCCCGGATTGGGTTGGTGTAAAACGAGGCCGTCCCGGCCTTTCACCAGACGGGCCACAACAgcggc < 8:397715/137‑1 (MQ=255) tGATTGTGTGATTATTGGCGGCGCCATCATCGGCATGTAGACCGCCATGCAACTTATTTCTGTTTATCCGGCTGCCCTCATTGCGTTGCGGGAAAAAGAGTCCGGCCCGGCCTGCCACCCGACGGGCCACAACAgcgg < 2:196185/138‑1 (MQ=255) tttGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGCTGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGAt < 4:513613/140‑1 (MQ=255) tttGTGATTATTGGCGGCGGCATAATCGCCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGCCGGGCCACAACAGCGGCGTg < 5:1371329/138‑1 (MQ=255) tttGTGATTATTGGCGGCGCCATCAGCGGCATGGCGACCGCAATGCAACGGATTTATGTTTATCCGGCTGCCCGCTTTGCGTTGCTGCAAAACGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTg < 2:1216988/138‑1 (MQ=255) ttGTGATTATTGGCGGCGGCATCATCGGCATGTCGGCCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATc > 3:285049/1‑140 (MQ=255) ttGTGATTATTGGCGGCGGCATCATCCGCATGTCGACCGCCATGCAACTGAGTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGCGTCCGGCCCGGCCTGTCACCCGACGGGCCACAACAGCGGCGTGATc > 7:1232090/1‑140 (MQ=255) ttggATTATTGGCGGCGGCATCATCGTCATGTCGACATCCATGCATCTGATTTTTGTTTATCCGGATGCCCGCATTGCTTTGGTGGAAAAAGAGTCCGGCCCGGCCTGTCACCATACGGGCCACAACAGCGGCGTGATcc < 8:1204250/137‑1 (MQ=255) gtgATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATc > 1:1392393/1‑138 (MQ=255) gtgATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATc > 5:629650/1‑138 (MQ=255) gtgATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATc > 6:1248001/1‑138 (MQ=255) tattattGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCa < 2:1112263/137‑1 (MQ=255) ttattGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCt < 4:1296061/140‑1 (MQ=255) ttattGGCGGCGGCATCATCGGCATGGCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATg < 2:891147/138‑1 (MQ=255) tattGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGCTGGTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGCCGGCCCACAACAGCGGCGTGATCCAGGc > 6:1287645/1‑138 (MQ=255) tattGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGCGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTg < 7:76879/140‑1 (MQ=255) tattGGCGGCGGCATCAGCGGCATGTCGACCGCCATGCAACTGATTTATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGGCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGc < 5:1135831/138‑1 (MQ=255) aattGGCGGCGGCATCATCGGCATGTCGACCGCAATGCAACTTATTGTTGTTTATCGGGATCCCCGCTTTGGGTTGCTTCAAATAGAGTCCGGCCCGGCCTGTCACCTTAGGGGCCTCAACAGCGGCGTGATCCATGCTg < 4:480191/139‑1 (MQ=255) ttGGCGTCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAACACGAGGCCGGCCCGGCCTGTCACCAGAGGGGCCACAACAGCGGCGTGATCCATGCTggg < 4:1219870/140‑1 (MQ=255) ttGGCGGCGGCATCAGCGGAATGTCGACCGCAATGAAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGTAAAAAGAGCCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTg < 1:10875/138‑1 (MQ=255) ggcggcggcATCAGCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAACGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGt < 4:275642/140‑1 (MQ=255) cggcggcATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCt < 8:448623/140‑1 (MQ=255) cggcATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATCCCCGCATTGCGTTGCTGGAAAACGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTAtt < 8:211613/140‑1 (MQ=255) ggCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGTAAAACGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGccc < 5:135242/138‑1 (MQ=255) aTGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCGATTACACGCCCGGCAg > 7:445484/1‑140 (MQ=255) gTCGCCCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAg > 5:170690/1‑138 (MQ=255) tCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGc > 2:788195/1‑138 (MQ=255) gACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGGCCGGCCCGGCCTGTCACCAGCCGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCt < 2:417303/138‑1 (MQ=255) gACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGGTGCTTGAAAAACAGACCGCCCCGGCCTGCCACAAGACGGGCCACAACAGCGGCGTGATCCATGGTGGGATCTATTACACGCCCGGCAGCCTGa < 8:323414/140‑1 (MQ=255) gACCGCAATGCAACTGATTGTTGTTTATCCGGAGGCCCGCATGGCGTTGCGGTAAAAAGAGCCCGCCCCGGCCGGCCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGa < 3:494006/140‑1 (MQ=255) caCCGCCATGCAACTGTATGTTGTTAATCCGGTCGCCCGAATTCCGTTGCTGCAAACAGAGGCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCt < 2:229524/137‑1 (MQ=255) ccATGCATCTGTTTGATGTTTAACCGGATGCCCTCATGGCGTGGCTGGAAACCGCGGCGGGCGCGGCTTGGCCCCCGCGGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGgcg < 7:1159210/140‑1 (MQ=255) ccATGCAACTTATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAACGAGCCCGGCCCGGCCTGTCCCCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAgg < 5:349025/138‑1 (MQ=255) ccATGCAACTGATTTATGTTTATCCGTATGCCCGCATGGCTTTGCTGGAAAAAGAGCCCGGCCCGGCCTGTCCCCCGAGGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGgcg < 3:698072/140‑1 (MQ=255) ccATGCAACTGATTGATGTTTATCCGGCTGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAgg < 2:1288809/138‑1 (MQ=255) ccATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCGGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGCCGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGgcg < 3:947113/140‑1 (MQ=255) tGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACCACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAg > 4:1081477/1‑140 (MQ=255) cAAGTGATTGATGTTTATCCGGATGCTCGCATTGCGTTGCGGGAAAACGCGCCCGCCCCGCCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAg < 6:989332/138‑1 (MQ=255) aaaCGGATTGTGGTTTATCCGGAGGCCCTCAGTGCGTTGCTGTAAAACGCGTCCGGCCCGGCCTGTCACCAGCCGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAg < 2:705005/137‑1 (MQ=255) tattgatGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGcc < 8:1041724/139‑1 (MQ=255) gattgatGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCCTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGcc > 8:865633/1‑140 (MQ=255) gattgatGTTTATCCGGATGCCCGCATTGCGTTGCGGCAAAAAGAGCCCGGCCCGGCCTGTCACCCGACGGGCCACAACAGCGGCGTGAGCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGcc < 8:564829/140‑1 (MQ=255) attgatGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCAGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCt > 8:658635/1‑140 (MQ=255) tgatGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCCCCAGACCGGCCACCACAGCTGCGTGATCCATGCTGGGGTCTATTACACGCCCGCCAGCCTGAATGCGCAGTTCtccag > 5:1339255/1‑134 (MQ=255) tATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCCCACCAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGaaa > 7:96992/1‑140 (MQ=255) aTCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAAc > 3:605024/1‑140 (MQ=255) gtaTGCCCGCATGGCGTGGCTGGAAAAAGCGCCGGGCGGGGCCTGTCACCATAGGGGCCACAAGTGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACcgcg < 3:707266/138‑1 (MQ=255) ggttGCCCGCATTGCGTTGCTGGAAAAAGCGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACcgcg < 4:752470/137‑1 (MQ=255) ggtagCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACcgcg < 4:1401886/136‑1 (MQ=255) gATGCCCGCATTGCGTTGCTGGAAAAATAGTCCGTCCCGGCCTGTCACCAGCCGGTCCACAACAGCCGCTTGATCCATTCTGGCGGCTATTACACGCCCGGAAGCCTGAAGGCGCAGTTCTGCCTGGCTGGAAACCgcgc > 4:135973/1‑140 (MQ=255) aTGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACcgcg > 5:556162/1‑138 (MQ=255) tGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCgcgc > 1:368139/1‑138 (MQ=255) tGCCCGCATTGCGTTGATGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTTCCTGGCGGGAAACCgcgc > 5:703710/1‑138 (MQ=255) gCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTGTTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGAGGGAACCCGCGcc > 6:736396/1‑138 (MQ=255) cccGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGCAGGCGCAGTTCTGCCTGGCGGGAAACCGCGccacc > 3:15525/1‑140 (MQ=255) ttGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAg > 5:91994/1‑138 (MQ=255) gTTGATGGTAAAAGAGTCCGGCCCGGCCTGTCACCAGTCGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCtt < 6:444529/138‑1 (MQ=255) cTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAATGCGCAGTTCTGCCTGGCGGGAAACCGCGCCCCCAAAGCCTTTTGCGa > 8:978650/1‑140 (MQ=255) agTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAATCCGCGCCACCAAGGCCTTTTGCTAACACAACg > 6:204350/1‑138 (MQ=255) ggccggcccggcCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACgg < 1:32197/136‑1 (MQ=255) ggccggcccggcCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACgg < 2:614086/136‑1 (MQ=255) ggccggcccggcCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCa < 8:1092397/138‑1 (MQ=255) gTCCGGCCCGGCCTGTCCCCAGCCGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAAGCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCa < 7:134808/140‑1 (MQ=255) gTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACgg < 1:788195/138‑1 (MQ=255) gTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCa < 3:1271970/140‑1 (MQ=255) gTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCa < 4:910450/140‑1 (MQ=255) gTCCGGCCCGGCCTGCCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACgg < 2:679662/138‑1 (MQ=255) tCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGCAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCACAGCCTTTTGCGATCAGAACGGc > 5:421992/1‑138 (MQ=255) tCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGCAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCATTTTGCGAGCAAAACGGc > 5:863663/1‑138 (MQ=255) cggcccggccTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCAtta > 3:131167/1‑139 (MQ=255) ggcccggccTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCAtt > 1:443602/1‑138 (MQ=255) gcccggccTGTCACCAGACGGGCCACAACAGCGGCGTGATACATGCTGGGGGCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGAGCCAACACAGCCTTTTGCGATCAAAACGGCAttg > 6:805997/1‑137 (MQ=255) gcccggccTGCCACCAGCCGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCATTc < 5:682555/138‑1 (MQ=255) cTGTCACCACACGGGCCACAACAGCGGCGTGAGACATGCTGGAGTCTATTACACGCCCGGCAGCCTGAACGCTCAGTGATGCCTGGCCGGACACCGCGCCACACACTCCTTTTGCTAACAAAACGGCATTCGCTATgc > 6:92574/1‑137 (MQ=255) cACCCGCCGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCATTCGCTATGACAACTg < 7:382203/140‑1 (MQ=255) cACCAGCCTGTCCACAACAGCGGCTTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTGTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCTATCAAAACGGCATTCGCTATGACTAc < 2:277189/138‑1 (MQ=255) cACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCATTCGCTATGACAAc < 1:874184/138‑1 (MQ=255) cACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGAGCAAAACGGCATTCGCTATGACAAc > 1:343015/1‑138 (MQ=255) aCCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCATTCGCTATGACAACt > 5:803108/1‑138 (MQ=255) | AGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTTTATCCGGATGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGGCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCTGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTCTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCATTCGCTATGACAACTG > NZ_CP022686/1392348‑1392620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |