| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP022686 | 3,528,218 | A→C | 7.6% | D57A (GAC→GCC) | carB → | carbamoyl‑phosphate synthase large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP022686 | 3,528,218 | 0 | A | C | 7.6% | 422.3 / 5.2 | 211 | D57A (GAC→GCC) | carB | carbamoyl‑phosphate synthase large subunit |
| Reads supporting (aligned to +/- strand): ref base A (94/95); new base C (8/13); total (102/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 232 total aligned reads displayed.
TGATTCTGGGTGCGGGCCCGATTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGACGGCGCTGAACTGTGCGCTGGAGCTTGAG > NZ_CP022686/3528080‑3528357 | tGATTCTGGGTGCGGGCCCGATTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATgaccgac < 4:1134607/140‑1 (MQ=255) taTTCTGGGTGCGGGCCCGATTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGTTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATgaccgacc < 7:309229/139‑1 (MQ=255) aTTCTGGGTGCGGGCCCGATTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGcccc > 4:1172485/1‑140 (MQ=255) cGGGCCCGATTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCt > 7:956499/1‑140 (MQ=255) gCCCGATTGTTATCGGTCAGGCGTGTGATTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGAt < 2:256667/140‑1 (MQ=255) gCCCGATTGTTATCGGTCAGGAGTGTGAGTTTGACTACTCTGGCGAGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGAt < 8:152236/140‑1 (MQ=255) gCCCGATTGGTATCGGTCAGGCGGGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGAt < 2:1080069/140‑1 (MQ=255) cccGATTGTTCTCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATg < 2:81773/140‑1 (MQ=255) cccGATTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATg < 5:236852/140‑1 (MQ=255) cccGATTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATg < 1:839312/140‑1 (MQ=255) aTTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATTACCGCCCCGGAACTGGCTGATGCacc > 7:1098255/1‑138 (MQ=255) aTTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGGTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAAc < 6:357629/140‑1 (MQ=255) aTCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACAt > 5:1072328/1‑140 (MQ=255) ggTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCgc > 7:1038740/1‑139 (MQ=255) tCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACACGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAAcc > 2:1225474/1‑130 (MQ=255) tCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACACGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAAcc < 1:1225474/130‑1 (MQ=255) ggCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCACTGCGGGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCACCACGGCGACTTTCATCACCGACCCGGAAATGGCTGATGCAACCTACATCGCGCCGa > 1:1035356/1‑140 (MQ=255) gCGGGTGAGTTTGACTACTCTGGCGCGCATGCGTGTAAAGCCGTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGAACCGGAAATGGCTGATGCAACCTACATCGAGCCGAt < 4:826741/140‑1 (MQ=255) cGTGTGAGTTTGACTACTCTGGCGCACAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGAtt < 6:777400/140‑1 (MQ=255) tgtgAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCa < 6:420582/140‑1 (MQ=255) tgtgAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCa < 7:829657/140‑1 (MQ=255) tgATTTTGACTTCTCTGGCTCGCTAGCGTGTAAAGCCCTGCGTGAAGACGTTTACCGCGTCATTCTCGTGAACTCCAACCCGGCTACTATCATGACCGACCCTGAAATGGCTGCTGCAACCTACATCGAGCCGATTCACt < 8:1181814/140‑1 (MQ=255) tgAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGAATCACt > 6:709251/1‑140 (MQ=255) tgAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCAACATCGAGCCGATTCACt > 3:942046/1‑140 (MQ=255) ttttGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTggg < 1:1282428/139‑1 (MQ=255) gcttGACTTCTCTGGCGGGCAAGGGTTTAACTCCCTGCGTGAAGAGGGTTACCGGGTTATCATCCTGAACTCCAACCCGGCTTCTATCATGACCTACCCGTAAATGGCTGATGCAACCTTCTTCGTGCAGTTTAAATggg < 6:996723/138‑1 (MQ=255) tGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTTCGTGACGTGGGATCCCGCTGCATTCTCGTGAACTCCAACCCTGCGACTATAATGACCGACCCGGAACTGGCTGATGCAACCTACATCGAGCCGATGCACTGGGAAg < 2:69156/140‑1 (MQ=255) tGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAg > 7:421470/1‑140 (MQ=255) gACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGt > 8:781876/1‑140 (MQ=255) gcgcgcAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGCCCGCCCCGGAAATGGCTGATGCAACCTACATCGATCCGATTCACTGGGAAGTGGTACGCAAg > 6:748882/1‑140 (MQ=255) gcgcgcAAGCGTGTAAAGCACTGCGTGAAGAGGGTTACCTCGTCATTCTCGTGAACTACAACCCGGCGACTATCCTGACCGACCCGGAAATGGCTGATGCAACCTAACTCGAGCCGCTTCACTGGGATGTGTTACGGAAg > 6:1194243/1‑140 (MQ=255) gcgcAAGCGTGTAAAGCACTGCGTGAAGAGGGTTACCGCGGCATTCTCGTTCACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGat < 3:695376/140‑1 (MQ=255) cgcAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGatt > 4:202687/1‑140 (MQ=255) gccaGCGTGTAAAGCCCTGCGTGAACAGGGTCACCGCGTCATGCTCGTGAACTCCAACCCGGCGACTATCAGGCCCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGatta < 3:925648/137‑1 (MQ=255) cAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGattat > 5:620649/1‑140 (MQ=255) aaGCGTGTAACGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGattatt > 8:294271/1‑140 (MQ=255) gtgtAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGaaa > 3:341344/1‑140 (MQ=255) tAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAag > 3:1013713/1‑140 (MQ=255) cccTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGCCCCGGAAATGGCTGATGCAACCTACATCGAGCCGAATCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAgcgc > 6:207946/1‑140 (MQ=255) cccTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGaa < 3:4151/71‑1 (MQ=255) tGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGCAATGGCTGATGCAACCTACATCGAGCCGAGTCACTGGTAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCg > 4:372447/1‑140 (MQ=255) tGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGCGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCg > 3:55784/1‑140 (MQ=255) tGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCg > 1:752515/1‑140 (MQ=255) tGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCg > 5:746400/1‑140 (MQ=255) tGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCg > 5:445176/1‑140 (MQ=255) tGCGTGAAGAGGGATACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCTAGATTATTGAAAAAGAGCGCCCg > 3:1274963/1‑140 (MQ=255) cGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGCCCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGa > 6:1094126/1‑140 (MQ=255) cGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGa > 1:859913/1‑140 (MQ=255) tGACGAGGGTTACCGCGTCATTCTCGTTAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGAcg < 7:482854/140‑1 (MQ=255) cgggTTACCGCGTCATGCTCGTGAACTCCAACCCGGCGACTATCATGCCCGACCCGGAACTGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAACGAGCGCCCGGACGCGGtg < 6:268881/139‑1 (MQ=255) gTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGtgctg > 5:1188517/1‑140 (MQ=255) tACCGCGTCATTCTCGTGAACTCCACCCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGcc < 6:789562/140‑1 (MQ=255) tACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAACGAGCGCCCGGACGCGGTGCTGcc < 1:471915/140‑1 (MQ=255) tACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGcc < 2:1275458/140‑1 (MQ=255) tACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGcc < 4:171136/140‑1 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGAt < 4:25515/56‑1 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGAt > 3:25515/1‑56 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGat > 8:865258/1‑100 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGat < 7:865258/100‑1 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATg > 1:228409/1‑140 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATg > 4:968347/1‑140 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATg > 6:777046/1‑140 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATg > 4:328819/1‑140 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATg > 6:171734/1‑140 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGACCGGACGCGGTGCTGCCAACCCTg > 6:1226257/1‑140 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTCGGAAGTGGTACGCATGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATg > 6:740815/1‑140 (MQ=255) tCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTAACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATg > 4:497605/1‑140 (MQ=255) aTTCTCGTGAACTCCAAACCGGCGACTATCATGACAGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGCTTCACTCTGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCAGGACGCTGTGCTGCCAACCATggg > 4:894445/1‑140 (MQ=255) taaCTCCACCCCGCCGACTATCATGACCGACCCGGAAATGGCTGATGAAACCTACATCGCGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGCGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGa < 2:1140853/139‑1 (MQ=255) taaCTCCAACCCGGCGACTATCTTGACCGCCCCGGAAATGGCTGATGCAACCTACATCTAGCCTATTCACTGGGAAGTGGTACGCAAGATTATTGAAAACGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGa < 7:284467/139‑1 (MQ=255) taaCTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGa < 2:498255/139‑1 (MQ=255) taaCACCCACCCGGCTACTATCATGACCGACCCGGAAATGTCTGACGCAACCTCCACCGCCCCGAATCACGGGTAAGTGGTACGCAAGATTATTCAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGa < 8:558989/139‑1 (MQ=255) ccaCTCCACCCCGGCGACTCTCATGCCCGACCCGGAAATGGCTGATGCAACCAACATCGAGCCGATTCACTGGGAAGTGGTACGCAATATTATTTAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGa < 3:781081/138‑1 (MQ=255) caccTCCCACCCGGCGACTATCAGCACCGCCCCGGAAATGGCTGATGCAACCTCCATCGAGCCGATTCACTGGGAAGTGGTACCCAAGATTATTGAAAAAGAGCGCCCGCACGCGGTGCTGCCAACCATGGGGGGGCAGa < 5:327134/137‑1 (MQ=255) caaCTCCCACCCGGCGACTATCATGACCCCCCCGGAAATGGCTGAGGCAACATACATCGCGCCGTTTCACTGGGAAGTGGTACGCACGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGa < 1:1020368/139‑1 (MQ=255) caaCTCCAACCCGGCGACTATCATCACCGACCCGGAAAGGGCTGAGGCAACCTACATCGAGCCTATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGa < 4:406256/139‑1 (MQ=255) caaCTCCAACCCGGCGACTATAATGACCGACCCGTAAATGGCTGATCCAACCAACATCGCGCCGATGCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGGGCTGCCAACCATGGGGGGGCAGa < 7:764629/139‑1 (MQ=255) caaCCCCAACCCGGCCACAATCTAGACCGACCCGGAAATGGATGATGCAACCTACATCGAGCCGATTCACTGGTAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGa < 4:681281/139‑1 (MQ=255) cTCAAACCCGGCGACTATCATGACAGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGTGAAGTGGTACTCAAGATTATTGAAAAAGAGCGCCCTGACGCGGTGCTGCCAACCATGGGGGGGCAGACgg > 8:520081/1‑140 (MQ=255) aaCCCGGCGACTATCATCACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTAACTGGGAAGTGGTACGCAAGATTATTGAAAACGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGACGGCGCt < 2:275834/140‑1 (MQ=255) aCCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACt > 7:256895/1‑63 (MQ=255) aCCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACt < 8:256895/63‑1 (MQ=255) aCCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTAAATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGACGGCGCTg > 1:515104/1‑140 (MQ=255) ccGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACAACGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGACGGCGCTGaa < 4:599003/140‑1 (MQ=255) ccGGCGACAATCATCCCCGCCCCGGAAATGGCGGACGCAACCTACCTCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGACGGCGCTGaa < 2:438117/140‑1 (MQ=255) gCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGAAGGCGCTGAACtt > 6:452201/1‑139 (MQ=255) cGACTATCATGCCCGACCCGGAAATGGCTGCAGCACCCTACATCGAGCCGATTCCCTGGGAAGTGGTCCGCAAGATTATTGAAAACAAGCGCCCGGACGCGGTGCTGCCAACCATGCGGGGGCAGCCGGCGCTGAACtgt > 8:319366/1‑140 (MQ=255) cGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACCTCGAGCCGATTCACGGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGACGGCGCTGACCtgt > 2:157832/1‑140 (MQ=255) cGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCa > 2:593660/1‑55 (MQ=255) cGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCa < 1:593660/55‑1 (MQ=255) cGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACg < 3:1145630/70‑1 (MQ=255) cGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACg > 8:453072/1‑70 (MQ=255) tGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTCCGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGCCGGCGCTGACCTGTGCGCTggcg > 7:620/1‑138 (MQ=255) tGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGACGGCGCTGAACTGTGCGCTGGAg > 5:969305/1‑140 (MQ=255) tGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGACGGCGCTGAACTGTGCGCTGGAg > 6:971821/1‑140 (MQ=255) ccgaccCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGTTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGACGGCGCTGAACTGTGCGCTGGAGCtt < 3:131846/140‑1 (MQ=255) ccgaccCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCATCCATGGGGGGGCAGACGGCGCTGAACTGTGCGCTGGAGCtt < 1:980374/140‑1 (MQ=255) caccCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGACGGCGCTGAACTGTGCGCTGGAGCTTGa < 3:1172485/139‑1 (MQ=255) accCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGTGGGGGCAGACGGCGCTGAACTGTGCGCTGGAGCTTGAg > 8:874568/1‑140 (MQ=255) accCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGa > 4:832677/1‑111 (MQ=255) | TGATTCTGGGTGCGGGCCCGATTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTCGTGAACTCCAACCCGGCGACTATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTGGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACCATGGGGGGGCAGACGGCGCTGAACTGTGCGCTGGAGCTTGAG > NZ_CP022686/3528080‑3528357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |