| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP022686 | 4,508,982 | A→C | 5.9% | N453T (AAC→ACC) | pqiB → | intermembrane transport protein PqiB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP022686 | 4,508,982 | 0 | A | C | 5.9% | 446.0 / 2.2 | 191 | N453T (AAC→ACC) | pqiB | intermembrane transport protein PqiB |
| Reads supporting (aligned to +/- strand): ref base A (76/100); new base C (6/9); total (82/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 201 total aligned reads displayed.
ATCCCGACCGTTAGCGGCGGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCGCAGCCTACAAC > NZ_CP022686/4508843‑4509121 | tCCCGACCGTTAGCGGCGGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAAc > 5:1209247/1‑140 (MQ=255) gACCGTTAGCGGCGGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGc > 5:255174/1‑140 (MQ=255) cccGTTAGCGGCGGTCTGGCGCATATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACGGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAACCCTGCa > 5:1168565/2‑140 (MQ=255) aCCGTTAGCGGCGGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCa < 1:719774/140‑1 (MQ=255) aCCGTTAGCGGCGGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCa > 3:139028/1‑140 (MQ=255) aCCGTTAGCGGCGGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCa > 7:20101/1‑140 (MQ=255) aCCGTTAGCGGCGGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAAACTGCa > 6:955671/1‑140 (MQ=255) ggtcaGCGGGTGTCTGGGGCAATTCCTGCACCGAGTGATGTTAGCGTTGGTTAAGATCAACAAACTGCCATTGAATCCGATGATTGAACCGGCACCCAGTACGCTTTGTGAAAGTCTGCGCACAATTAAAACCCTGCaaa < 4:982005/136‑1 (MQ=255) ctttAGCGGCGGTCTGGCGCAAATCCCGCAACGCCTGAGGGAAGCGTTGGATAAGATCACCAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCaaa < 8:180224/138‑1 (MQ=255) cGTTAGCGGCGGTCTGGCGAAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCaaa < 3:181650/140‑1 (MQ=255) ttAGCGGCGGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAacg < 8:36681/140‑1 (MQ=255) tAGCGGCGGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAacgc > 4:670533/1‑139 (MQ=255) tAGCGGCGGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAacga > 8:63115/1‑140 (MQ=255) gcggcgGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATAAACAAACTGCCATTGAATCCTATGATTGAACCGGCAACCAGTACGCTTTCTTAAAGTCAGCGCACAATGAAAAACCTGCAAacgacg < 6:861891/140‑1 (MQ=255) gcggcgGTCGGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAAAAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAacgacg < 2:18498/140‑1 (MQ=255) cggTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTgg < 8:833008/140‑1 (MQ=255) ggTCTGTCGCAAATCCAGCAACGACTGATGGAAGAGTGGGTTAAGATAAACAAACTGACATTTAATCCGATGATTGAACAGTCAAACAGTACTCTTTCTGAAAGGCAGCGCACAATGAAAAACCTGCAAACGACGCTGGa < 8:690683/140‑1 (MQ=255) ggTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGTTTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAACCCTGCAAACGACGCTGGa < 3:872993/140‑1 (MQ=255) gTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGAt > 8:558199/1‑140 (MQ=255) gggCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTTAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGc < 2:99470/139‑1 (MQ=255) aTCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGCTTGCACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACaa > 3:531152/1‑140 (MQ=255) aTCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGACCAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACaa > 7:460311/1‑140 (MQ=255) aTCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACATGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACaa > 6:1041347/1‑140 (MQ=255) cGAATGATGGATGCGTTGGATAAGATAAACAAACTGCAATTCAATCCTATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCTCACGACGCTGGATAGCATGAACAAGATCCTTgc < 5:1123089/140‑1 (MQ=255) aCTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTTCGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTgcca > 5:967255/1‑140 (MQ=255) ggAAGCGTTGGATAAGATCAACAAACTGCCATTTATTCCGATGATTGAACAGGCAACCAGTACGCTTTCTTAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGt < 2:258329/140‑1 (MQ=255) ggAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGACCAGGCACCCAGTACGCTTTCTGACATTCAGCGCACAAGTAAAAACCTCCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGt < 6:457016/140‑1 (MQ=255) aGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGa > 7:645763/1‑140 (MQ=255) aGCGTTGGATAAGATCAACAAACTGCAATTGAATCCGATTATTGAACAGGAACCCAGTACGCTTTCTTAAAGTCATCGAACAATGAAAAACCTGCAAACGACGCTGGAGTGCATGAACAAGATCCTTGACAGCCAGTCGa > 2:556973/1‑140 (MQ=255) ggTTGTATAAGATCAACAAACTGCCATTGAAGCCGATGATTGAACAGGCAACCAGTACGCTTTCTCAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATg < 8:670405/139‑1 (MQ=255) ggATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATgcagc < 4:1213365/140‑1 (MQ=255) gATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCCACCAGTACGCGTTCTGTAAGTCAGCGCACAATGAAAACCCTGCACACGACTCTGGATTGAATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTag > 8:1098600/1‑139 (MQ=255) gATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCTTTGCCAGCCAGTCGATGCAGCAGTTAc > 5:572063/1‑140 (MQ=255) gATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCGGCAAACGACGCTGGATAGAATGAACAAGATACTTGCCAGCCAGTCGATGCAGCAGTTAc > 1:946689/1‑140 (MQ=255) ctCAACAAACTGCCATTCAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTAcc < 6:538922/139‑1 (MQ=255) agcaacaaACTGCCATTGAATCCGATGATTGACCAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTAcc < 8:893056/138‑1 (MQ=255) aTCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTAcc < 1:557338/140‑1 (MQ=255) aTCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAACGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTAcc > 7:908201/1‑140 (MQ=255) caagaaCCTGCCATTTAAGCCGATGTTTGAACAGGCAACCAGTACGCTTTCTGAATGTCAGCTCACATTGAAAAACCTGCCAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGa < 8:637859/140‑1 (MQ=255) caacacACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTATCTCAAAGTCAGCGCACAATCAAAAACCTGCAACCGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGa < 2:705034/140‑1 (MQ=255) caacaaACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGa < 4:824796/140‑1 (MQ=255) caacaaACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGa < 1:1238966/140‑1 (MQ=255) caacaaACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGa < 4:327843/140‑1 (MQ=255) caacaaACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGa < 4:1045061/140‑1 (MQ=255) aaacaaACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGa < 3:464817/139‑1 (MQ=255) aaaaaaaCTTCAATTGAATCCGATGATTGAACAGGCAACCAGTAAGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGa < 3:582208/136‑1 (MQ=255) acaaACTGCCTTTGAATCCTATGATTTAACAGGCAACAAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCATACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACg < 1:363369/140‑1 (MQ=255) acaaACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATg > 3:596877/1‑125 (MQ=255) acaaACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACg > 3:325968/1‑140 (MQ=255) acatGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCGTTCTGAAAGTCAGCGCACACTGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGat < 1:50212/137‑1 (MQ=255) cTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGatat < 2:377459/140‑1 (MQ=255) cTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGatat < 7:386701/140‑1 (MQ=255) tGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAACCGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATg > 4:54996/1‑140 (MQ=255) tGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGTATATg > 6:236322/1‑140 (MQ=255) tGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATg > 7:104429/1‑140 (MQ=255) tGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATg > 2:1135200/1‑140 (MQ=255) tGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGAGCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATg > 6:1170027/1‑140 (MQ=255) gcatttGAATCCGATGATTGAACAGGAAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGc < 6:670349/136‑1 (MQ=255) aTTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGt < 4:850590/140‑1 (MQ=255) aTCCGATTATTGAACAGGCAACAAGTACGCTTTCTGAAAGTCAGCTCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACg < 8:1168449/140‑1 (MQ=255) aTCCGATGATTGAACAGGCAACCAGTTCGCTTTATGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAAAAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACg < 1:849185/140‑1 (MQ=255) tCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACTCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGt > 3:612539/1‑140 (MQ=255) cggtttatTGAACAGGCAACCAGTACGCTTTCTGAAAGTCTGAGCACAATGAACAAGCGGAAAACGACGCTGGATAGCATGAACTAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGtt < 3:408994/134‑1 (MQ=255) gatgatTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGc > 7:755991/1‑140 (MQ=255) ttGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGtgaa < 5:900673/140‑1 (MQ=255) ttGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGtgaa > 6:163950/1‑140 (MQ=255) ttGAACAGGCAACCAGTACGCCTTCTGAAAGTAAGCGCAAAATTAAAAAACTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGtgaa < 5:1062670/140‑1 (MQ=255) atGAACAGTCAACCAGTCCGCTTTCTGAAAGTCAGCGAACTATGAAAAAACTTCAAACGACGATGTATAGCATGACCAAGATCCTTGCCAGCCAGTCTATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGtgaa < 8:748813/139‑1 (MQ=255) cAGGCAACCCGTACGCTTTCTGAAAGTCAGTGCACAATGACAAATCTGCAACCGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGGCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGtgaattgaa < 6:323592/140‑1 (MQ=255) aGGCAACCAGTACGCTTTCTTAAAGTCAGCGCACAATGAAAAACCTGCACACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGtgaattgaat < 1:1197086/140‑1 (MQ=255) ccccccAGCACGCTTTCTTACAGGCCGCGCACACTGAACAACCTGCACACGACGCTGGATAGCAGGCACAAGATCCTTGCCAGCCATTCTATGCAGCAGTTACCGACTGATAGGCAGTCACCGTTGCGTGAATTGAATCg < 4:437455/136‑1 (MQ=255) aaCCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCgca < 2:7490/140‑1 (MQ=255) aaCAAGTACGCTTTCTGATAGTCTGCGCAGAATGAAAAACCTGCAACCGTCGCTGGATAGCATGACCAAGATCCTTGCCAGCCAGTCGATGCAGCAGGTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCgca < 7:1076289/140‑1 (MQ=255) aCGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCa < 1:444455/140‑1 (MQ=255) tttCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTAcc < 5:732895/91‑1 (MQ=255) tCTGAAAGTCAGCGCACAATGAAAACCCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGCCGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCtt > 7:154962/1‑140 (MQ=255) tCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCtt > 4:598980/1‑140 (MQ=255) tCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCtt > 1:612649/1‑140 (MQ=255) tCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCtt > 6:417973/1‑140 (MQ=255) tCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATACTTGCCAGCCAGTCGATGCAGCAGATACCGACGGATATGCAGTCAACGTTGCGTGAAATGAATCGCAGCATGCAGGGCtt > 7:1165435/1‑140 (MQ=255) gAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTccc > 3:775706/1‑139 (MQ=255) gAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCa > 5:379703/1‑140 (MQ=255) cgTCAGCGCACAATGAAAACCCTGCAAACGACGCTGGATAGCATGTAAAAGATCGATGCCATCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATGGAATCGCAGCATGCAGGGCTTCCAGcc < 2:1003060/139‑1 (MQ=255) aGTCAGCGCACAATGAAAAACCTGCAACCGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGcc < 7:300455/140‑1 (MQ=255) aGTCACCGCACAATGAAAAACCGTCCCACGACGCTGGATAGCATGAACAAGATACTTGCCAGACAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCTCACCATGCAGGGCTTCCAGcc < 7:718754/140‑1 (MQ=255) tCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTg > 4:1096048/1‑140 (MQ=255) aGCGCACAATGAAAACCCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGt > 2:814704/1‑140 (MQ=255) aGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCCACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGt > 6:65907/1‑140 (MQ=255) ccaaaTGAAAACCCTGCAAACGACGCTGGCTAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCg < 3:23706/137‑1 (MQ=255) cacaATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCg < 7:997654/140‑1 (MQ=255) cacaATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCg < 4:215884/140‑1 (MQ=255) caaaaTTAAAAACCTGCAAACGTCGCTGGATAGCATGAACAAGAGCCTTGCCAGACAGTCTATTCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCg < 7:747641/137‑1 (MQ=255) aaaTTAAAAACCTTCAAAAGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCGCa < 2:1229238/139‑1 (MQ=255) ttataaaCCTGCAAACGACGCTGGATAGCATGAAGAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCGCAGcc < 1:795693/136‑1 (MQ=255) tGAAAAACCTGCAAACGACGCTGGATATCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCGCAGcc < 6:489078/140‑1 (MQ=255) tGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCGCAGcc < 5:1136960/140‑1 (MQ=255) tGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCGCAGcc < 4:520384/140‑1 (MQ=255) aaaaaCCTGCATACGACGCTGGATTGCATGAACTAGATCCTTGCCATCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAAGGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCGCAGCCTa < 7:592699/140‑1 (MQ=255) aaaaCCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAgg < 2:514636/114‑1 (MQ=255) aaCCTGAAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCGCAGCCTacaa < 5:944448/140‑1 (MQ=255) | ATCCCGACCGTTAGCGGCGGTCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTTGCCAGCCAGTCGATGCAGCAGTTACCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGTTCCGCAGCCTACAAC > NZ_CP022686/4508843‑4509121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |