| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP022686 | 2,361,489 | T→G | 9.2% | V188G (GTT→GGT) | nikA → | nickel ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP022686 | 2,361,489 | 0 | T | G | 9.2% | 250.7 / 2.6 | 136 | V188G (GTT→GGT) | nikA | nickel ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (48/72); new base G (14/2); total (62/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.54e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 137 total aligned reads displayed.
ATCACCCTGAAAAGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGA‑TCCCGGACCCGACTACCCGCGCGGTGGCGTTTGAAACTGG > NZ_CP022686/2361350‑2361627 | cTGAAAAGCGCCTACTATCCTTACCGCCAAGAACTGGCCCTGCCCCGGCCTTGCCGTTTTATCCCACCCGCCCAGTTTAAAAACCACGACCCCATGAACGTAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACa < 5:8999/140‑1 (MQ=255) tGAAAAGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACACTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTaa > 3:1014845/1‑137 (MQ=255) aaGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGa < 3:672289/138‑1 (MQ=255) aaGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGa > 7:590881/1‑138 (MQ=255) aaGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAAt < 1:215966/140‑1 (MQ=255) aaGCGACTACTATCCTTTCCTGCAACAACTTGCCCTGCCCCGTCATTTCATTTTTATCGCACTCTCGCAGTTTAAAAACCACTAAAACATGAACGGAATTAAAGCGACGATTGGCACCGGGCCGTGGGTTTTACAGGAAt < 6:443710/140‑1 (MQ=255) aGCGCCTACTATACTTTCCTGCTAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCCCACCGTCGCTTTTTAAAAACCACTAACCCATCAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATc < 1:979128/140‑1 (MQ=255) cctcctATCCTTTCCTGCAAGAACTGGCCCTGCCCCGGCCTTTCCGTTTTATCGCCCCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGa < 3:1034608/138‑1 (MQ=255) ccTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGaaa < 1:676472/140‑1 (MQ=255) ccTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGaaa < 2:436663/140‑1 (MQ=255) ctactaTCCTTTCCTGCAACAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAAc < 6:599978/140‑1 (MQ=255) actaTCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAATACAACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTAAAGGAATCGTAAcag > 1:936685/1‑138 (MQ=255) tttcTTTCATGCAAGAACTGGCCCTGCCCCGTCCTTTCTGTTTTATCGCACCCTCGCAGTTTAAAAACAACGAAACCATGAACGTAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAAt < 5:423258/137‑1 (MQ=255) ttCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACAGAATCAGTa > 6:814206/1‑140 (MQ=255) ttCCTGAAAGATCTGTCCCTGCCCCGTCCTTTCCGTTTTATCGCACACTCGCAGTTTAAAAACCACTAAACCATGAACGGTATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAg < 3:475508/138‑1 (MQ=255) taccTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCTGTTTAAAAACCACTAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTa < 1:767654/138‑1 (MQ=255) ccTGCTAGACCTGGCCCGTCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAACCCACGACCCCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACg < 1:517819/140‑1 (MQ=255) ccTGCTAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGTTTTTACAGGAATCGAAACTGAATCAGTa < 3:25098/138‑1 (MQ=255) ccTGCACGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTa < 4:1029474/138‑1 (MQ=255) ccTGCAAGAAGTGGCCCTGGCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACg < 6:659920/140‑1 (MQ=255) ccTGCAAGAACTGGCCCTGCCCCGTCCTTTCCTTTTTATCGCACCCTCGCATTTTCAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTa < 7:77678/138‑1 (MQ=255) ccTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCATCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACg < 2:475616/140‑1 (MQ=255) ccTGCAAGAACTGGCCCGGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGGTTAAAAACCACGAACCCATGAACGGAATTAACGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTa < 3:815130/138‑1 (MQ=255) cTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCGCGACACCATGAGCGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTGTACAGGGATAGAAACTGAATGACTAc > 7:282225/1‑138 (MQ=255) cTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTACAGGCATCGAAACTGAATCAGTAc > 4:599663/1‑138 (MQ=255) cTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCACGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTGAGAGGAAAGGAAAATTAAAAAGTAc > 7:63719/1‑138 (MQ=255) cAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACCAt > 8:487813/1‑138 (MQ=255) aGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACAGAATCAGTAACATGt > 8:949513/1‑138 (MQ=255) taaCTGGCCCTGCCCCGTCCTTTCCGTTTTAACGCACCCTCGCAGTTTAAAACCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTc < 7:559437/137‑1 (MQ=255) gCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTATAGGAATCCAAACTGAATCAGTACCAAGTCATCGTCCCTAAcc > 5:1002344/1‑139 (MQ=255) cccGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAACGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACg < 4:610028/138‑1 (MQ=255) cccGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAACGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATAGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGaa < 2:716966/140‑1 (MQ=255) cccGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACg < 8:882004/138‑1 (MQ=255) cccGTCCTTTCCGTTTTATCGCACCCTCGAAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCTCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACg < 7:587818/138‑1 (MQ=255) cccGTCCTTTACGTTTTATAGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGGCGATTGGCACCGGGCCGTGGGGTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGaa < 5:694188/140‑1 (MQ=255) ccGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTACAGGAATCGAAACTGAATCAGTACGATGTATTAGTCCGTAACgc > 4:51100/1‑137 (MQ=255) tCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTAAAGGAATCGAAACTGAATCAGTAAGATTTCTTCGTCCGTAACGAAAaca > 1:252868/1‑139 (MQ=255) tCCTTTCCGTTTTATAGCACCCTCGCAGTTTAAAAACCCCTAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCAGTGGGTTTTACAGGAAGAGAACCTGAATCATGACGAAGTCTTACTGCGTAACAAAAaca > 5:903335/1‑139 (MQ=255) ccTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAAACAGTACGATGTCATAGTCCGTAAAGaaaaa > 3:619954/1‑137 (MQ=255) cTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCCCCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATTTCTTCGTCCGTAACGAAAaca > 8:410362/1‑137 (MQ=255) cTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTTCAGGAATCGAAACTGAATCAGTACGATGTATTCGTACGTAACGAAAact > 3:842132/1‑138 (MQ=255) cTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTTAAAGAATCGAAACTGATTCAGTACGATTTATTCTTCCGTAACGaaaaat > 3:930002/1‑136 (MQ=255) cTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTAAAGGAATCGAAACTGAATCAGTAAGATGTATTCTTCCGTAACGAAAaca > 3:550922/1‑137 (MQ=255) cTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCAAGACCGGAAATAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCTCAACTGAATCAGTACGAAGTATTCGTACCAAACGCAAaca > 7:911298/1‑137 (MQ=255) ttCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGCACTGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAactac < 7:612512/138‑1 (MQ=255) tCCGTAATATCGCACCCTCGCAGTTAAAAAACCACGAAACAATGAACGTAATTAAACCGCCGATTGGAACCGGGCCGTGGGTTTTACATGAATCGAAAAAGAATCAGAACGATGTAATACTCCGTAACCAAAacgacatg > 2:260768/1‑137 (MQ=255) cGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTa > 8:876448/1‑107 (MQ=255) cGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTGTAAAGGAATCGAAACTGAATAAGTACGATGTCTTAGTCCGGAAAGAAAACTACTgg > 7:460556/1‑138 (MQ=255) cGTTTTATCGCACCCTCGCAGTTAAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGCTTGGCACCGGGCCGTGGGTTTTACAGGAATAGAAACTGAATCCGTACGATGTCTTCGTCCTGAAAGAAAAATACTgg > 8:540347/1‑138 (MQ=255) tttATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACACGAATAGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACGACTGGGGCGa > 6:172139/1‑140 (MQ=255) cccTCGCAGTTTAAAAACCACGAACCCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGc < 6:349699/140‑1 (MQ=255) cccTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCg < 8:923820/138‑1 (MQ=255) gCAGTTTAAAAACCACTAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTa < 2:1088784/140‑1 (MQ=255) gCAGTCTAAACACCACGAAACCATGAACTGCATTAATGCGCCGCTTGGCAACGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGag < 4:779909/138‑2 (MQ=255) aGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTAAGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTa > 3:22691/1‑138 (MQ=255) tttAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGGTTAAAGGAATCGAAACTGAATCAGTACGAAGGCTTCGTCCGTATCGAAAACTTCTGGGGCGACAACCCCGCGATTaaaaa > 5:235887/1‑140 (MQ=255) tAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACAGGGCAGTGGGTTTTACATGAATAGAAACAGAATCAGTAAGATGTATTAGTCCGTAACGAAAACTACAGGGGCGAAAATCCCGGGATTaaaaaca > 6:704936/1‑138 (MQ=255) aacaaCCACGACAACATGACCGGAATTAAAGAGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAACCTGAATCAGTACGAGGGCTTCGGCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAg < 7:818036/135‑1 (MQ=255) aaaaaCCACTAAACCATGAACTGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 5:1033204/140‑1 (MQ=255) aaaaaCCACGTAACCATGATCGGAATTAAAGCGCCTATTTGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 2:4385/140‑1 (MQ=255) aaaaaCCACGTAACCATGAACGGAATTAAAGCGACGATTTGCACCGGGCCGGGTGTTTTACAGGAATCTAAAAAGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTTCTGGGGCGAAAAGCCGGCGATTAAAAAg < 4:663059/138‑1 (MQ=255) aaaaaCCACGAAAGCATGAACGGAATTTACGGGCCGATTGGCTCCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 6:404560/140‑1 (MQ=255) aaaaaCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCTGGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 2:987489/140‑1 (MQ=255) aaaaaCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGACTCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAg < 3:219210/138‑1 (MQ=255) aaaaaCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCTAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCTAAAAGCCGGCGATTAAAAAGAt < 5:325277/140‑1 (MQ=255) aaaaaCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAg < 4:594749/138‑1 (MQ=255) aaaaaCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAg < 3:215751/138‑1 (MQ=255) aaaaaCCACGAAAAAATGATCTGACTTAAAGCGCCGATTGGCACCGGGACGTGGGTTTTACATGAATCGAAACTGAATCAGTACTATGTATTCGTACGTAACGAAAACTACTGGGGCGAAAAGCCGGAGATTAAAAAg < 8:663369/138‑1 (MQ=255) aaaaaCCACCAAACCATGAACGGAATTAAAGCGCCGATAGGCACCGGGCCGTGGGTTTTACAGGAATAGAAACTGAATCAGTACGATGTCATCGACAGAAACGAAAACTACTTGGGCGAAAAGCCGGCGATTAAAAAGAt < 5:165276/140‑1 (MQ=255) aaaaCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTTCAGGAATCGAGACTGTATAACTACGCTGTCTTAGTCCGTAACGAAAACTACATGGGGGAAAAGCCGGCGATTAAAAAGATc > 2:405449/1‑140 (MQ=255) cACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCAcc < 7:594194/138‑1 (MQ=255) aCGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCttt < 1:608987/140‑1 (MQ=255) aCGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTAAAGGAATCGAAACAGAATCAGTACGATGTCTTCGGACGTAACGAAAACTACTGGGGCGAAAAGCCCGCGCTTAAAAAGATAACCatt > 6:941399/1‑140 (MQ=255) gAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTa < 3:556285/74‑1 (MQ=255) gAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTa > 4:556285/1‑74 (MQ=255) gAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTAAGATGTCTTCGTCCGTAACGAAAACTAATGGGGCGAAAAGCCCGCGATTAAAAAGATCACCgtt > 3:548582/1‑138 (MQ=255) aCCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAAc < 3:649032/138‑1 (MQ=255) tGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTTGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGa < 4:958672/138‑1 (MQ=255) tGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACAGAATCAGTACGATGTCATCGTCCGTAACGAAAAATACTGGGGCGAAACGCCGGCGATTAAAAAGATCACCTTTAACGTGA‑ta > 6:398120/1‑139 (MQ=255) aCGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCATTAACGTGA‑Tcccc > 2:758931/1‑139 (MQ=255) ctgAATTAAAGCGCCGATTTGCACCGGTCCGTGGGTTTTACAGGAATAGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGA‑TCCCgg < 1:267556/138‑1 (MQ=255) ttAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATAGAAACAGAAACAGTAAGATGTCTTCGTCCGGAACGAAAACTACAGGGGCGAAAAGCCGGCGAATAAAAACATAACCTTTAAACTGA‑TCCCGGAcc > 7:898478/1‑138 (MQ=255) ttAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTAAATGAATCGAAACAGAATAAGTACGATGTCTTCGTACCTAACGCAAACTACTGGGGCGAAAATCACGCGATTAAAAAAAACACAGTTTACGAGA‑TCCCGGaac > 4:180054/1‑136 (MQ=255) ttAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTAAAGGAATCGAAACAGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTTACGTGA‑TACCGGAcc > 7:554110/1‑138 (MQ=255) gcgcCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAACCTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGA‑TCCCGGACCCGACt < 8:172609/138‑1 (MQ=255) gcgcCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGA‑TCCCGGACCCGACt < 7:854611/138‑1 (MQ=255) ccGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGATACTGAATCAGTAAGATGTCTTCGTGCGTTACGAAAACTACTGGGGCGCAAATCCGGCGATTAAAAAGATCACCATTAACGTGA‑TCCCGGACACGACTAcc > 7:524222/1‑138 (MQ=255) ccGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGA‑TCCCGGACCCGACTAcc < 7:949513/138‑1 (MQ=255) ccGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCCATTAAAAAGATCACCTTTAACGTGA‑TCCCGGACCCGACTAcccc > 1:791344/1‑139 (MQ=255) ccGATTGGCACCGGGCCGTGGGTTTTACAGGAAACGAAACTGAATAAGTACGATGTCTTCGTCCCGAACCAAAACTACAGCGGCGAAAAACCGGCGATTAAAAAGATCACCTTTAACGTTA‑TAACGGCCCCGACTAcccc > 6:363556/1‑139 (MQ=255) ccGATTGGCACCGGGCCGTGGGGTTTACAGGAATCGAAACTGAATCAGTAAGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATAACCTTTAACGTGA‑TCCCGGACCCGACTAcccc > 2:394640/1‑139 (MQ=255) gATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATAAGTAAGATGTCGTAGTCCGTAACGCAAACTACTGGGGCGAAAAGCCGGCGATTAAAAATATCACCTTTTACGTGA‑TCCCGGCCCCGACTAcccc > 7:394796/1‑137 (MQ=255) gATTGGCACCGGGCCGTGGGTTTTAAAGGAATCGAAACTGAATCAGTACGATGTGTTCGGCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAATCTCACCTTTAACGTGC‑TCCCGGACCCGACTAcccc > 4:816875/1‑137 (MQ=255) gCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGA‑TCCCGGACCCGACTACCCGCGCGGTg < 1:758931/140‑1 (MQ=255) ggCCGTGGGTTTTACAGGAATAGAAACTGAATCAGTACGATTTCTTAGTCCGTAACGAAAACTACATGGGCGAAAAGCCGGCGCTTAAAAAAATCACCTTTAAACTGA‑TCCCGGCCCCGACAACCCGCGCAGTGGCGttt > 2:840940/1‑140 (MQ=255) ggCCGTGGGTTTTAAAGGAATCGAAACTGAATCAGTTCGATGTCTTCGTCCGTAAAGAAAACTAATGGGGCGAAAAGCCGGCGATTAAAAAGATAACCATTAAAGTGAGTCCCGG‑CCCGCCTACCCCCGCGGTgggcgtt > 2:172861/1‑135 (MQ=255) ccGTGGGTTTTACAGGAATCGGAACAGAATAACTACCCAGTATTAGTCCGTAACGAAAACTAATGGGGCGAAAAGCCGGCGATTAAAAAGATAACCTTTAACGGGA‑TCCCGGGCCCGCCAACCCGCGCGGGGGCGttt > 8:1026270/1‑138 (MQ=255) ccGTGGGTTTTACAGGAATAGAAACTGAATCAGTACGATGTCTTCGGCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACCTGA‑TCCCGGCCCCGACTACCCACGCGGTGGCGttt > 4:1086134/1‑138 (MQ=255) ccGTGGGGTTTTCAGGAATCGAAACTGAATCAGTACGATGTCGTAGTCCGTTACGAAAACTACTGGGGCGAAAAGCCGGCGCTTAAAAAGATCACCTTTTACGTGA‑TCCCCGAACCGACTACCCGCGCGGGGTCGttt > 4:528764/1‑138 (MQ=255) ttgtgTTTAACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAACATCACCTTTAACGTGA‑TCCCGTACCCGACTACCCGCGCGGTGGCGTTTGaaa < 5:514111/136‑1 (MQ=255) | ATCACCCTGAAAAGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGA‑TCCCGGACCCGACTACCCGCGCGGTGGCGTTTGAAACTGG > NZ_CP022686/2361350‑2361627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |