| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP022686 | 1,460,615 | A→C | 13.0% | K673N (AAA→AAC) | flhA → | formate hydrogenlyase transcriptional activator FlhA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP022686 | 1,460,615 | 0 | A | C | 13.0% | 255.3 / 2.3 | 137 | K673N (AAA→AAC) | flhA | formate hydrogenlyase transcriptional activator FlhA |
| Reads supporting (aligned to +/- strand): ref base A (76/39); new base C (4/18); total (80/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.77e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 154 total aligned reads displayed.
AACCTGAAACGCCGCCTGCCGCAACGGTTGTCGCCCAGGAGGGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCGGA > NZ_CP022686/1460479‑1460752 | aaCCTGAAACGCCTCCTGCCGCAACGGTTGTCGCCCAGGAGGGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGc > 6:540100/1‑140 (MQ=255) aCCTTAAACGCCGCTGGCGGCAAGGGTTGTCGCCCTGTAGGGTTATTATTATTTTCTTTTTTTTGTTCGC‑TGGCTTAAATAAACAAACGGGGTGGTTGCGGGGCCTAACGGCGCTGCGCAACGTCTGGGGCTTaaagg < 4:452231/138‑3 (MQ=255) aCCTGAACCCCGGCCTGCCGCAAGGGTTGGCGCCCTGGTGGGCTAAGATTAATATCTTTTTATTGTGCGC‑TGGGTTAAATAAACACACGGCGTGGTTGCCGGGCCTAATGGCGCTGCGCAACGTCTGGGGCTGAACCg < 4:860538/138‑1 (MQ=255) aCCTGAAACGCCGCCTGCCGCAACGGTTGTCGCCCAGGAGGGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCa > 7:4711/1‑140 (MQ=255) ccTGAAACGCCGCCTGCCGCAACGGTTGTCGCCCAGGAGGGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGc > 1:928819/1‑138 (MQ=255) cagAAACGCCGCCTGCCGCAACGGTTGTCGCCCAGGAGGGCGAAGATGAATATCAGTTGATTGTTAGC‑GTGATGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAACGGCGCTGCGCAACGTCTGGGGCTGAACCggc > 3:437290/3‑136 (MQ=255) cTGAAACGCCGCCTGCCGCAACGGTTGTCGCCCAGGAGGGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGcc > 2:133978/1‑137 (MQ=255) cgccTGCCGCAACGGTTGTCGCCCAGGAGGGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTctgctg > 5:1081603/1‑140 (MQ=255) cccTGCCGCACGGGTGGTCGCCCTGGAGGGTTAATATTAATATCTGTTTTTTTTGCGC‑GTGCTTAAACAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGAAACGTCTGGGGCTGAAACGCACGACTCTGCTGt < 5:712008/139‑1 (MQ=255) ccTGCCGCAACGGTTGTCGCCCAGGAGGGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCACCGTCTGGGGCTGAAACGCACGACTctgcgg > 4:278453/1‑136 (MQ=255) ccTGCCGCAACGGTTGTCGCCCAGGAGGGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTctgctg > 3:372028/1‑138 (MQ=255) cTGCCGCACCGGTTGTCGCCACGGTGGGCGAATATTAAAATCAGTTGA‑TGTTTGCGGTGCTCAACCAAAAAACCGGCGGGGTGGCCGGGCCTAAAGGCGCGGCGCAACGTCGGGGGCTGAAACGCACGACTCTGCTGTCa < 8:290326/140‑1 (MQ=255) gTCGCCCCGGTGGGCTATTATTATTATCATTTGTTTGTGCGG‑GTGCTTAAAGAAACAAAGGGCGTGGTGGCCGGGCCTAACGGCGCTGCGCAACGTCGGGGGCTTAAACGCACGACTCTGCTGTCACGGATGAAGCGACt < 5:982027/140‑1 (MQ=255) gTCGCCCAGGAGGGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCGGCGCAACGTCTGGGGCTGAAACGCACTCCTCTGCTGTCACGGATGAAGCGACt > 6:830713/1‑140 (MQ=255) ggaggGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAAt > 3:704387/1‑138 (MQ=255) aggGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTg > 3:357853/1‑138 (MQ=255) gCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGATGCGACTGGGAATTGATaaa > 6:1067477/1‑140 (MQ=255) ctaaGATGAATATCAGATTAATGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGGATCGGGCTGAAACGAACGACTCTGCTGTCACCGATGAACCGACTGGGAATTGATaaaa > 6:1083654/3‑139 (MQ=255) cGAAGATGATTATCAGGTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCCCGGATGACGCGACTGGGAATTGATAAAt > 8:790064/1‑140 (MQ=255) cGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAACCGCACGCCTCTGCTGTCACGGATGAAGCGACTGGGATTTGATAAAt > 7:217624/1‑140 (MQ=255) cGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATaa > 3:50193/1‑138 (MQ=255) cGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAAt > 7:757575/1‑140 (MQ=255) cGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAAt > 5:804988/1‑140 (MQ=255) cGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACCGAGGAAGCGACTGGGAATTGATaa > 2:921195/1‑138 (MQ=255) cGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGAGTGGTTGCCGGGACTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTTCTGTCACGGATGAATCGACTGGGAATTGAAAAAt > 8:563349/1‑140 (MQ=255) gAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGCCTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATc > 5:723707/1‑140 (MQ=255) gAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGACACGGATGAAGCGACTGGGAATTGATAAATc > 8:212734/1‑140 (MQ=255) aaGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAAt > 3:1026774/1‑138 (MQ=255) aaGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAAt > 3:952618/1‑138 (MQ=255) aaGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAAt > 1:100721/1‑138 (MQ=255) aaGATGAATATCAGTAGATTGTTCTC‑GTGCTCAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACTAACGACTCAGCTGACAAGCATGAAGCGAAAGGGAATTCATAAAt > 3:1070537/1‑138 (MQ=255) aaTATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTg > 5:487394/1‑140 (MQ=255) atatCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGCCTGGGAATTGATAAATCGGCATTGa > 7:359330/1‑140 (MQ=255) atatCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGACTGGAGCTGAAACGCTCGACTCTGCTGTCACGGATGAAGCGACAGGGAATTGATAAATCGGCATTGa > 7:359327/1‑140 (MQ=255) tgTTGATTTTTCGC‑GTGCGTAAATAAACAAACGGCGTGGTTGCCGGGCATAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGAttt < 4:816614/137‑1 (MQ=255) gTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAAc > 6:57392/1‑140 (MQ=255) tGATTGTTCGC‑GTGCTGAAAGAAACACACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGATTTGATAAATCGGCATTGATTTAAc > 1:1044017/1‑138 (MQ=255) tGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAAc > 4:356406/1‑138 (MQ=255) tGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAAc > 1:367763/1‑138 (MQ=255) tGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGGCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGATTTGATAAATCGGCATTGATTTAAc > 4:50689/1‑138 (MQ=255) ttttGTGCGC‑GTGCTCAAAGAAACACCCGGCGGGGTTGCGGGGCCTAACGGCGCTGCGCAACGTGTGGGGCTTAACCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACa < 1:66908/136‑1 (MQ=255) gATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGTCATTGATTTAACAGa > 7:270226/1‑140 (MQ=255) ttttttggc‑gTGCTTAAATAAACAACCGGCGGGGTGGCCGGGCCTAACGGCGCTGCGCAAGGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGTTAAATCGGCATTGATTTAACAGAt < 7:596962/133‑1 (MQ=255) tttGTTCGG‑GGGCTTAAACAAACAAACGGCGTGGTTGCCGGGCATAACGGCGCGGCGCAACGGCTGGGGCTGAACCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGAt < 5:643381/139‑1 (MQ=255) tttGTTCGC‑GTGCTGAAAGCACAACACGGCGTGGTGGCCGGTCCTAACGGCGCTGCGCACCGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGAt < 8:293124/139‑1 (MQ=255) ttgggtggc‑gGGCTTAAAAAAACAACCGGCGTGGTTGCCGGGCCAAACGGCGCTGCGCAACGTCTGGGGCTGAAACCCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGAt < 8:1009001/133‑1 (MQ=255) aTTTTTCGC‑GTGCTTAAAGAAACAACCGGCGTGGTTGCCGGGCCTAACGGCGCGGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGAt < 8:527602/140‑1 (MQ=255) aTTGTCCGC‑GTCCTTAACTAACCAACCGGCGGGGTTGCCGGGCCTACCGGCGCGGCGCAACGGCGGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGAt < 6:465361/140‑1 (MQ=255) tagTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGATGCCGGGCCTAAAGGCGCAGCGCAACGTCTTGGGCAGAAACGAACGACTCTGCTGTCACGGATGAAGCGACATGGAATTGATAAATCGGCATTGATTTAACAGa > 1:670714/3‑138 (MQ=255) tGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTATGGGGCTGAAACGCAAGACTCTGCTGTCACGGATGAAGCGACTTGGATTTGATAAATCGGCATTGATTTAACAGAtgt > 7:991301/1‑140 (MQ=255) tGTTCGC‑GTGCGGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGAtgt > 7:887567/1‑140 (MQ=255) gc‑gTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCTGCATTGATTTAACAGATGTGGTta > 7:714326/1‑140 (MQ=255) gc‑gTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGt > 2:67330/1‑138 (MQ=255) ggTGCTTAAACAAACAAACGGCGGGGTGCCCGGGCCTAACGGCGCTGCGAACCGTCTGGGGCTTAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGtt < 1:845360/137‑1 (MQ=255) ctcaaataaaCAAACGGCGTGGTGGCCGGGCCTAAAGGCGCGGCGCAACGTCTGGGGCTGAACCCCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATAc < 3:805550/135‑1 (MQ=255) cTGAAATAAACACACGGCGGGGTTGCCGGGCCTAAAGGCGTGGCGCAAGGTCTGGGGCTGAACCGCACGACTCTGCTGTCACGGGTGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTc < 5:190541/140‑1 (MQ=255) aaataaaCAACCGGCGTGGTGGCCGGGCCTAACGCGGCTGCGCAACGTCTGGGGCTTAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGAt < 6:918232/140‑1 (MQ=255) aaataaaCAACCGGCGGGGTGGCGGGGCCTAACGGCGCTGCTCAACGGCTGGGGTTGAACCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGAt < 5:1023054/140‑1 (MQ=255) aaagaacCAAACGCCGGGTTGGCCGGGCCTAAAGGCGCTGCGCAACGGCTGGGGATGAAAGGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCg < 3:231117/138‑1 (MQ=255) acacaacaaccGGGGGGGTTGGCGGGCCTAACGGCGCGGCGCAACGTGTGGGGGTTAACCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATc < 6:186565/136‑1 (MQ=255) aataaacacacGGCGTGTTTGCCGGGCCTAATGGCGCTGCTCAACGTCGGGGGCTGAAACTCACGACTCTGCTGTCAAGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGa < 2:447653/135‑1 (MQ=255) ggCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAACCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCaa > 2:392240/1‑138 (MQ=255) cGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGACGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGaa > 8:73552/1‑140 (MQ=255) gTGGTTGCGGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTTAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGAATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGa < 4:467349/138‑1 (MQ=255) tGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGaa > 3:132857/1‑138 (MQ=255) gggTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGA‑‑CTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAag < 3:992121/137‑1 (MQ=255) tttGCCGGGCCTAAAGGGGCTGCGCAAGGTGTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAag < 4:213819/137‑1 (MQ=255) gTTGCTGTGACTAAAGGCGCTGCGCATCGTCTGGGGCTTAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGTGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAagga < 6:738440/140‑1 (MQ=255) ggCCGGGCCTAAAGGCGCTGCGCAACGTCGGGGGAGGAAACGCACGACTCTGATGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAaggagg < 6:802868/139‑1 (MQ=255) ggCCGGGCATAATGGGGGGGCTCAGGGTGTGGGGCTTAACCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAaggagg < 5:425440/139‑1 (MQ=255) ggCCGGGCATAACGGCGCGGCGCAACGGCTGGGGGGGAAACCCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAaggagg < 7:906718/139‑1 (MQ=255) ggcTGCGCAACGTCTGGGGCTGAACCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGtt < 4:795740/137‑1 (MQ=255) cTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGCAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAg > 5:851074/1‑140 (MQ=255) cTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGCAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAg > 5:605568/1‑140 (MQ=255) cTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATAGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATAAACATTCTATGAAAGGAGGCAGTATGGCAGTTTCAg > 7:507499/1‑140 (MQ=255) cTGAGCAACGTCTGGAGCTGAAACGCACGACTCTACTGTACCGCATGAAGCGACTGGTAATTGATAAATCGGCATTGATTTAAAAGATGTTGTTATACTCGCTCAACATTCAATGAAAGTAGGCATTATCGCAGTTTCAg > 8:247895/1‑140 (MQ=255) tGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCa > 3:748080/1‑138 (MQ=255) tGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGc < 8:757575/140‑1 (MQ=255) gcgcAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAg > 4:668904/1‑138 (MQ=255) gcgcAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAg > 3:920126/1‑138 (MQ=255) cAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGTATGAAGAGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCTATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCaa > 3:912962/1‑138 (MQ=255) cgggggCTCAACCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATc < 2:970373/136‑1 (MQ=255) cTGGGGCGGAACCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCaa < 6:1003417/140‑1 (MQ=255) ggggCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCaa < 3:765999/138‑1 (MQ=255) ggggCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAAtt > 8:967163/1‑140 (MQ=255) ggggCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAAtt > 6:474773/1‑140 (MQ=255) ggCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAAtt > 2:211466/1‑138 (MQ=255) ggCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTaa < 6:691160/140‑1 (MQ=255) tGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCg > 8:529168/1‑140 (MQ=255) aaaGGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAGATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCg < 1:409802/138‑1 (MQ=255) aaaCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCg < 3:1053104/138‑1 (MQ=255) aaaCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCGGa < 8:1052205/140‑1 (MQ=255) aaaCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCGGa > 6:927573/1‑140 (MQ=255) aaaCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACAGTCAATGATAGGAGGCAGTATGGCAGTTTCAGCAAGAAAGGAATTAACCGGa > 7:603428/1‑140 (MQ=255) aaaCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACAATCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCg < 4:87220/138‑1 (MQ=255) aaaCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCAGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCGGa > 7:1003485/1‑140 (MQ=255) aCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAaggagg < 3:32336/101‑1 (MQ=255) aCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCGGa > 4:545653/1‑138 (MQ=255) aCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCGGa > 4:6323/1‑138 (MQ=255) aCGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCGGa > 3:1041328/1‑138 (MQ=255) | AACCTGAAACGCCGCCTGCCGCAACGGTTGTCGCCCAGGAGGGCGAAGATGAATATCAGTTGATTGTTCGC‑GTGCTGAAAGAAACAAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACTCTGCTGTCACGGATGAAGCGACTGGGAATTGATAAATCGGCATTGATTTAACAGATGTGGTTATACTCGATCAACATTCAATGAAAGGAGGCAGTATGGCAGTTTCAGCAAGAAATCAATTAACCGGA > NZ_CP022686/1460479‑1460752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |