mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP022686 | 162,427 | T→G | 7.0% | V53G (GTG→GGG) | ydgH → | DUF1471 family protein YdgH |
| RA | NZ_CP022686 | 177,506 | T→G | 7.8% | Q140H (CAA→CAC) | uidB ← | glucuronide transporter |
| RA | NZ_CP022686 | 234,990 | A→G | 35.3% | K2E (AAA→GAA) | pykF → | pyruvate kinase PykF |
| JC | NZ_CP022686 | 235,939 | +TAA | 8.5% | coding (953/1413 nt) | pykF → | pyruvate kinase PykF |
| RA | NZ_CP022686 | 238,323 | A→C | 22.6% | F86V (TTT→GTT) | sufE ← | cysteine desulfuration protein SufE |
| RA | NZ_CP022686 | 238,324 | G→C | 18.8% | V85V (GTC→GTG) | sufE ← | cysteine desulfuration protein SufE |
| RA | NZ_CP022686 | 298,027 | A→C | 11.4% | F60C (TTT→TGT) | chbC ← | PTS N,N'‑diacetylchitobiose transporter subunit IIC |
| RA | NZ_CP022686 | 340,511 | G→C | 5.6% | G32G (GGC→GGG) | ydjK ← | MFS transporter |
| RA | NZ_CP022686 | 340,516 | A→C | 9.6% | F31V (TTT→GTT) | ydjK ← | MFS transporter |
| RA | NZ_CP022686 | 349,092 | A→C | 9.9% | N602T (AAC→ACC) | yeaG → | protein kinase YeaG |
| RA | NZ_CP022686 | 349,106 | A→C | 12.9% | T607P (ACC→CCC) | yeaG → | protein kinase YeaG |
| RA | NZ_CP022686 | 360,227 | T→G | 12.9% | T35P (ACG→CCG) | yeaR ← | DUF1971 domain‑containing protein YeaR |
| RA | NZ_CP022686 | 372,574 | A→C | 14.0% | N275T (AAC→ACC) | sdaA → | L‑serine ammonia‑lyase |
| RA | NZ_CP022686 | 418,374 | T→G | 11.5% | F48V (TTT→GTT) | znuB → | zinc ABC transporter permease subunit ZnuB |
| RA | NZ_CP022686 | 457,894 | Δ1 bp | 100% | pseudogene (288/997 nt) | CIW80_RS02445 ← | DUF968 domain‑containing protein |
| RA | NZ_CP022686 | 481,005 | A→C | 14.0% | L620R (CTG→CGG) | flhA ← | flagellar biosynthesis protein FlhA |
| RA | NZ_CP022686 | 496,134 | G→C | 15.0% | L383V (CTT→GTT) | otsA ← | alpha,alpha‑trehalose‑phosphate synthase |
| RA | NZ_CP022686 | 560,880 | C→T | 100% | intergenic (+62/+53) | CIW80_RS03085 → / ← pilV | hypothetical protein/shufflon system plasmid conjugative transfer pilus tip adhesin PilV |
| RA | NZ_CP022686 | 601,295 | T→G | 21.7% | V1607G (GTC→GGC) | irp1 → | yersiniabactin polyketide synthase HMWP1 |
| RA | NZ_CP022686 | 601,302 | T→G | 23.1% | R1609R (CGT→CGG) | irp1 → | yersiniabactin polyketide synthase HMWP1 |
| RA | NZ_CP022686 | 601,337 | T→G | 14.2% | V1621G (GTT→GGT) | irp1 → | yersiniabactin polyketide synthase HMWP1 |
| MC JC | NZ_CP022686 | 628,478 | Δ1,286 bp | 100% | [clbP] | [clbP] | |
| RA | NZ_CP022686 | 692,994 | G→T | 10.6% | D112Y (GAT→TAT) | CIW80_RS03550 → | YaiO family outer membrane beta‑barrel protein |
| RA | NZ_CP022686 | 694,391 | C→A | 13.2% | intergenic (+151/‑45) | CIW80_RS03555 → / → CIW80_RS03560 | transposase/PfkB family carbohydrate kinase |
| RA | NZ_CP022686 | 756,115 | A→G | 100% | G181G (GGT→GGC) | galE ← | UDP‑glucose 4‑epimerase GalE |
| RA | NZ_CP022686 | 765,008 | A→T | 10.4% | I37I (ATT→ATA) | wcaM ← | colanic acid biosynthesis protein WcaM |
| RA | NZ_CP022686 | 794,460 | C→T | 100% | A568V (GCG→GTG) | dgcE → | diguanylate cyclase |
| RA | NZ_CP022686 | 829,441 | C→A | 22.5% | intergenic (‑30/+197) | gatY ← / ← fbaB | tagatose‑bisphosphate aldolase subunit GatY/class I fructose‑bisphosphate aldolase |
| RA | NZ_CP022686 | 829,452 | G→T | 20.8% | intergenic (‑41/+186) | gatY ← / ← fbaB | tagatose‑bisphosphate aldolase subunit GatY/class I fructose‑bisphosphate aldolase |
| RA | NZ_CP022686 | 829,467 | C→A | 15.8% | intergenic (‑56/+171) | gatY ← / ← fbaB | tagatose‑bisphosphate aldolase subunit GatY/class I fructose‑bisphosphate aldolase |
| RA | NZ_CP022686 | 829,472 | G→T | 10.2% | intergenic (‑61/+166) | gatY ← / ← fbaB | tagatose‑bisphosphate aldolase subunit GatY/class I fructose‑bisphosphate aldolase |
| RA | NZ_CP022686 | 878,883 | T→G | 6.5% | intergenic (+75/+45) | yohD → / ← yohF | DedA family protein/SDR family oxidoreductase |
| RA | NZ_CP022686 | 917,427:1 | +TT | 100% | intergenic (+130/‑91) | yeiP → / → yeiQ | elongation factor P‑like protein YeiP/mannitol dehydrogenase family protein |
| RA | NZ_CP022686 | 948,014 | C→G | 15.9% | intergenic (+83/‑174) | CIW80_RS04855 → / → CIW80_RS04860 | terminase small subunit/hypothetical protein |
| RA | NZ_CP022686 | 948,049 | A→T | 10.0% | intergenic (+118/‑139) | CIW80_RS04855 → / → CIW80_RS04860 | terminase small subunit/hypothetical protein |
| RA | NZ_CP022686 | 954,498 | A→C | 8.2% | F47V (TTT→GTT) | ccmF ← | cytochrome c‑type biogenesis heme lyase CcmF |
| RA | NZ_CP022686 | 954,516 | A→C | 10.5% | L41V (TTG→GTG) | ccmF ← | cytochrome c‑type biogenesis heme lyase CcmF |
| RA | NZ_CP022686 | 1,005,082 | T→A | 7.4% | Y379* (TAT→TAA) | nrdA → | ribonucleoside‑diphosphate reductase subunit alpha |
| RA | NZ_CP022686 | 1,005,085 | C→A | 11.8% | T380T (ACC→ACA) | nrdA → | ribonucleoside‑diphosphate reductase subunit alpha |
| RA | NZ_CP022686 | 1,022,752 | T→G | 6.3% | T44P (ACG→CCG) | yfaZ ← | YfaZ family outer membrane protein |
| RA | NZ_CP022686 | 1,034,493 | T→G | 7.5% | T26P (ACC→CCC) | menC ← | o‑succinylbenzoate synthase |
| RA | NZ_CP022686 | 1,065,997 | A→C | 10.5% | A30A (GCT→GCG) | yfbS ← | SLC13 family permease |
| RA | NZ_CP022686 | 1,174,402 | G→T | 7.4% | intergenic (+12/‑35) | CIW80_RS05860 → / → CIW80_RS05865 | tRNA‑Val/tRNA‑Val |
| RA | NZ_CP022686 | 1,209,908 | T→G | 20.1% | D396A (GAC→GCC) | eutH ← | ethanolamine utilization protein EutH |
| RA | NZ_CP022686 | 1,213,479 | T→G | 12.5% | G420G (GGA→GGC) | eutE ← | aldehyde dehydrogenase EutE |
| RA | NZ_CP022686 | 1,325,422 | G→T | 5.2% | Q252K (CAA→AAA) | qseE ← | two component system sensor histidine kinase QseE/GlrK |
| RA | NZ_CP022686 | 1,353,233 | A→C | 19.2% | V72G (GTT→GGT) | yfiF ← | tRNA/rRNA methyltransferase |
| RA | NZ_CP022686 | 1,360,724 | G→T | 14.1% | intergenic (‑59/+265) | kgtP ← / ← rrf | alpha‑ketoglutarate permease/5S ribosomal RNA |
| RA | NZ_CP022686 | 1,360,736 | G→T | 8.0% | intergenic (‑71/+253) | kgtP ← / ← rrf | alpha‑ketoglutarate permease/5S ribosomal RNA |
| RA | NZ_CP022686 | 1,360,742 | C→A | 8.9% | intergenic (‑77/+247) | kgtP ← / ← rrf | alpha‑ketoglutarate permease/5S ribosomal RNA |
| RA | NZ_CP022686 | 1,360,762 | G→T | 6.9% | intergenic (‑97/+227) | kgtP ← / ← rrf | alpha‑ketoglutarate permease/5S ribosomal RNA |
| RA | NZ_CP022686 | 1,360,783 | G→T | 8.2% | intergenic (‑118/+206) | kgtP ← / ← rrf | alpha‑ketoglutarate permease/5S ribosomal RNA |
| RA | NZ_CP022686 | 1,370,565 | A→T | 9.0% | I96I (ATT→ATA) | rluD ← | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD |
| RA | NZ_CP022686 | 1,370,612 | C→A | 10.2% | D81Y (GAT→TAT) | rluD ← | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD |
| RA | NZ_CP022686 | 1,424,342 | C→G | 5.8% | intergenic (‑38/+25) | CIW80_RS07085 ← / ← CIW80_RS07090 | tRNA‑Arg/tRNA‑Arg |
| RA | NZ_CP022686 | 1,424,347 | A→T | 7.2% | intergenic (‑43/+20) | CIW80_RS07085 ← / ← CIW80_RS07090 | tRNA‑Arg/tRNA‑Arg |
| RA | NZ_CP022686 | 1,424,363 | G→T | 10.3% | intergenic (‑59/+4) | CIW80_RS07085 ← / ← CIW80_RS07090 | tRNA‑Arg/tRNA‑Arg |
| RA | NZ_CP022686 | 1,441,772 | A→C | 9.3% | R596R (CGT→CGG) | hypF ← | carbamoyltransferase HypF |
| RA | NZ_CP022686 | 1,465,000 | G→T | 8.2% | E173* (GAA→TAA) | pphB → | protein‑serine/threonine phosphatase |
| RA | NZ_CP022686 | 1,479,607 | A→C | 12.3% | intergenic (‑16/+177) | ftsB ← / ← ygbE | cell division protein FtsB/DUF3561 family protein |
| RA | NZ_CP022686 | 1,479,619 | T→A | 9.4% | intergenic (‑28/+165) | ftsB ← / ← ygbE | cell division protein FtsB/DUF3561 family protein |
| RA | NZ_CP022686 | 1,479,633 | A→C | 12.1% | intergenic (‑42/+151) | ftsB ← / ← ygbE | cell division protein FtsB/DUF3561 family protein |
| RA | NZ_CP022686 | 1,504,323 | C→A | 11.4% | P254T (CCT→ACT) | CIW80_RS07520 → | YgcG family protein |
| RA | NZ_CP022686 | 1,504,361 | G→T | 17.8% | V266V (GTG→GTT) | CIW80_RS07520 → | YgcG family protein |
| RA | NZ_CP022686 | 1,558,395 | A→C | 10.2% | K464N (AAA→AAC) | vgrG → | type VI secretion system Vgr family protein |
| RA | NZ_CP022686 | 1,564,569 | A→C | 9.2% | K190N (AAA→AAC) | CIW80_RS07780 → | ImcF‑related family protein |
| RA | NZ_CP022686 | 1,572,185 | A→C | 6.7% | S143R (AGC→CGC) | tssJ → | type VI secretion system lipoprotein TssJ |
| RA | NZ_CP022686 | 1,597,235 | T→G | 8.9% | N19H (AAC→CAC) | thyA ← | thymidylate synthase |
| RA | NZ_CP022686 | 1,619,230 | C→A | 8.1% | intergenic (+19/+298) | yqeG → / ← CIW80_RS07990 | amino acid permease/tRNA‑Gly |
| RA | NZ_CP022686 | 1,632,501 | T→G | 7.9% | V166G (GTT→GGT) | arcC → | carbamate kinase |
| RA | NZ_CP022686 | 1,633,854 | C→A | 29.7% | V250V (GTG→GTT) | yqeB ← | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| RA | NZ_CP022686 | 1,640,925 | A→C | 11.6% | R7S (AGA→AGC) | ygfM → | molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
| RA | NZ_CP022686 | 1,674,224 | T→G | 14.4% | K188N (AAA→AAC) | ygfB ← | UPF0149 family protein YgfB |
| RA | NZ_CP022686 | 1,674,231 | A→T | 12.7% | V186E (GTA→GAA) | ygfB ← | UPF0149 family protein YgfB |
| RA | NZ_CP022686 | 1,674,244 | T→G | 14.7% | T182P (ACC→CCC) | ygfB ← | UPF0149 family protein YgfB |
| RA | NZ_CP022686 | 1,674,248 | T→G | 12.8% | Q180H (CAA→CAC) | ygfB ← | UPF0149 family protein YgfB |
| RA | NZ_CP022686 | 1,692,094 | G→T | 10.0% | I174I (ATC→ATA) | CIW80_RS08330 ← | nucleoside/nucleotide kinase family protein |
| RA | NZ_CP022686 | 1,705,974 | T→G | 9.5% | intergenic (‑584/‑71) | yqgB ← / → metK | acid stress response protein YqgB/methionine adenosyltransferase |
| RA | NZ_CP022686 | 1,705,984 | T→G | 12.6% | intergenic (‑594/‑61) | yqgB ← / → metK | acid stress response protein YqgB/methionine adenosyltransferase |
| RA | NZ_CP022686 | 1,705,997 | C→A | 15.0% | intergenic (‑607/‑48) | yqgB ← / → metK | acid stress response protein YqgB/methionine adenosyltransferase |
| RA | NZ_CP022686 | 1,716,167 | A→C | 10.1% | N49T (AAC→ACC) | rdgB → | XTP/dITP diphosphatase |
| RA | NZ_CP022686 | 1,735,916 | A→T | 7.3% | pseudogene (353/569 nt) | papA ← | P fimbria major subunit PapA |
| RA | NZ_CP022686 | 1,758,771 | T→G | 5.8% | intergenic (+18/‑254) | sat → / → CIW80_RS08700 | serine protease autotransporter toxin Sat/transposase |
| RA | NZ_CP022686 | 1,805,056 | A→C | 6.3% | pseudogene (337/934 nt) | CIW80_RS09020 → | nucleotidyl transferase AbiEii/AbiGii toxin family protein |
| RA | NZ_CP022686 | 1,911,602 | T→G | 6.8% | N224T (AAC→ACC) | CIW80_RS09520 ← | MurR/RpiR family transcriptional regulator |
| RA | NZ_CP022686 | 1,925,365 | A→C | 7.1% | D162A (GAC→GCC) | ygiB → | DUF1190 family protein |
| RA | NZ_CP022686 | 1,954,923 | T→G | 19.2% | T92P (ACG→CCG) | ttdR ← | DNA‑binding transcriptional activator TtdR |
| RA | NZ_CP022686 | 1,965,144 | C→G | 5.8% | R96P (CGC→CCC) | nfeF ← | NADPH‑dependent ferric chelate reductase |
| RA | NZ_CP022686 | 1,965,173 | A→C | 8.3% | R86R (CGT→CGG) | nfeF ← | NADPH‑dependent ferric chelate reductase |
| RA | NZ_CP022686 | 1,975,137 | A→C | 8.3% | intergenic (+6/‑57) | ebgC → / → ygjI | beta‑galactosidase subunit beta/amino acid permease |
| RA | NZ_CP022686 | 1,975,144 | C→A | 5.8% | intergenic (+13/‑50) | ebgC → / → ygjI | beta‑galactosidase subunit beta/amino acid permease |
| RA | NZ_CP022686 | 2,016,153 | T→G | 6.3% | noncoding (121/377 nt) | rnpB ← | RNase P RNA component class A |
| RA | NZ_CP022686 | 2,016,160 | T→G | 6.6% | noncoding (114/377 nt) | rnpB ← | RNase P RNA component class A |
| RA | NZ_CP022686 | 2,016,170 | A→C | 6.9% | noncoding (104/377 nt) | rnpB ← | RNase P RNA component class A |
| RA | NZ_CP022686 | 2,016,217 | T→A | 5.9% | noncoding (57/377 nt) | rnpB ← | RNase P RNA component class A |
| RA | NZ_CP022686 | 2,027,390 | A→C | 6.5% | K80N (AAA→AAC) | agaE → | PTS N‑acetylgalactosamine transporter subunit IID |
| RA | NZ_CP022686 | 2,032,739 | G→T | 5.7% | W24L (TGG→TTG) | agaC → | PTS galactosamine transporter subunit IIC |
| RA | NZ_CP022686 | 2,035,536 | A→C | 7.4% | G133G (GGT→GGG) | rsmI ← | 16S rRNA (cytidine(1402)‑2'‑O)‑methyltransferase |
| RA | NZ_CP022686 | 2,037,521 | A→C | 9.1% | T508P (ACC→CCC) | lpoA → | penicillin‑binding protein activator LpoA |
| RA | NZ_CP022686 | 2,049,089 | T→G | 21.0% | N256T (AAC→ACC) | deaD ← | ATP‑dependent RNA helicase DeaD |
| RA | NZ_CP022686 | 2,049,097 | A→T | 13.4% | R253R (CGT→CGA) | deaD ← | ATP‑dependent RNA helicase DeaD |
| RA | NZ_CP022686 | 2,076,552 | A→C | 8.3% | intergenic (+22/‑211) | ispB → / → sfsB | octaprenyl diphosphate synthase/DNA‑binding transcriptional regulator SfsB |
| RA | NZ_CP022686 | 2,076,554 | T→G | 11.2% | intergenic (+24/‑209) | ispB → / → sfsB | octaprenyl diphosphate synthase/DNA‑binding transcriptional regulator SfsB |
| RA | NZ_CP022686 | 2,110,457 | T→G | 11.4% | K12N (AAA→AAC) | rplM ← | 50S ribosomal protein L13 |
| RA | NZ_CP022686 | 2,130,829 | A→C | 11.1% | V237G (GTT→GGT) | mreC ← | rod shape‑determining protein MreC |
| RA | NZ_CP022686 | 2,148,109 | T→G | 10.5% | V124G (GTG→GGG) | panF → | sodium/pantothenate symporter |
| RA | NZ_CP022686 | 2,148,115 | T→G | 11.8% | L126R (CTG→CGG) | panF → | sodium/pantothenate symporter |
| RA | NZ_CP022686 | 2,159,672 | G→C | 9.4% | A167P (GCA→CCA) | CIW80_RS10780 → | amino acid ABC transporter substrate‑binding protein |
| RA | NZ_CP022686 | 2,172,152 | G→T | 8.2% | Q96K (CAG→AAG) | smg ← | DUF494 family protein Smg |
| RA | NZ_CP022686 | 2,172,165 | G→T | 5.4% | F91L (TTC→TTA) | smg ← | DUF494 family protein Smg |
| RA | NZ_CP022686 | 2,172,177 | A→C | 8.3% | G87G (GGT→GGG) | smg ← | DUF494 family protein Smg |
| RA | NZ_CP022686 | 2,185,071 | A→C | 7.0% | G47G (GGT→GGG) | rpsE ← | 30S ribosomal protein S5 |
| RA | NZ_CP022686 | 2,185,075 | A→C | 9.7% | V46G (GTT→GGT) | rpsE ← | 30S ribosomal protein S5 |
| RA | NZ_CP022686 | 2,208,142 | A→C | 5.6% | V569G (GTT→GGT) | chiA ← | bifunctional chitinase/lysozyme |
| RA | NZ_CP022686 | 2,209,101 | A→T | 5.7% | I249I (ATT→ATA) | chiA ← | bifunctional chitinase/lysozyme |
| RA | NZ_CP022686 | 2,214,419 | T→C | 100% | K43R (AAA→AGA) | rpsL ← | 30S ribosomal protein S12 |
| RA | NZ_CP022686 | 2,215,206 | C→A | 5.3% | A41S (GCT→TCT) | tusC ← | sulfurtransferase complex subunit TusC |
| RA | NZ_CP022686 | 2,226,139 | A→C | 7.6% | D9A (GAC→GCC) | crp → | cAMP‑activated global transcriptional regulator CRP |
| RA | NZ_CP022686 | 2,320,775 | C→T | 100% | G274S (GGC→AGC) | CIW80_RS11675 ← | DNA‑processing protein DprA |
| RA | NZ_CP022686 | 2,340,264 | A→C | 6.6% | V91G (GTC→GGC) | livF ← | high‑affinity branched‑chain amino acid ABC transporter ATP‑binding protein LivF |
| RA | NZ_CP022686 | 2,356,231 | T→G | 8.4% | D9A (GAC→GCC) | tusA ← | sulfurtransferase TusA |
| RA | NZ_CP022686 | 2,357,324 | A→C | 18.2% | N37T (AAC→ACC) | dcrB → | phage sensitivity protein DcrB |
| RA | NZ_CP022686 | 2,362,954 | T→G | 5.5% | F152V (TTT→GTT) | nikB → | nickel ABC transporter permease subunit NikB |
| RA | NZ_CP022686 | 2,383,165 | G→T | 5.6% | intergenic (+56/+58) | uspA → / ← CIW80_RS26230 | universal stress protein UspA/hypothetical protein |
| RA | NZ_CP022686 | 2,386,496 | T→G | 6.9% | K417N (AAA→AAC) | prlC ← | oligopeptidase A |
| RA | NZ_CP022686 | 2,397,372 | C→G | 9.2% | L10V (CTT→GTT) | chuT → | heme ABC transporter substrate‑binding protein ChuT |
| RA | NZ_CP022686 | 2,408,861 | Δ1 bp | 100% | pseudogene (1097/3115 nt) | mdtF → | multidrug efflux pump RND permease MdtF |
| RA | NZ_CP022686 | 2,443,289 | A→C | 10.3% | V9V (GTT→GTG) | bcsQ ← | cellulose biosynthesis protein BcsQ |
| RA | NZ_CP022686 | 2,470,422 | T→G | 9.0% | K72N (AAA→AAC) | glyS ← | glycine‑‑tRNA ligase subunit beta |
| RA | NZ_CP022686 | 2,499,319 | T→G | 7.4% | N44T (AAC→ACC) | aldB ← | aldehyde dehydrogenase AldB |
| RA | NZ_CP022686 | 2,516,426 | T→A | 11.5% | G612G (GGT→GGA) | upaG → | trimeric autotransporter adhesin UpaG |
| RA | NZ_CP022686 | 2,546,394 | A→C | 12.6% | V95G (GTT→GGT) | waaG ← | glycosyltransferase family 4 protein |
| RA | NZ_CP022686 | 2,546,400 | A→C | 13.3% | L93R (CTG→CGG) | waaG ← | glycosyltransferase family 4 protein |
| RA | NZ_CP022686 | 2,546,423 | A→C | 17.2% | V85V (GTT→GTG) | waaG ← | glycosyltransferase family 4 protein |
| RA | NZ_CP022686 | 2,555,399 | T→A | 11.1% | intergenic (‑26/+40) | pyrE ← / ← rph | orotate phosphoribosyltransferase/ribonuclease PH |
| RA | NZ_CP022686 | 2,572,705 | A→C | 11.5% | G191G (GGT→GGG) | CIW80_RS12885 ← | ROK family protein |
| RA | NZ_CP022686 | 2,572,721 | A→C | 8.1% | F186C (TTT→TGT) | CIW80_RS12885 ← | ROK family protein |
| RA | NZ_CP022686 | 2,577,168 | G→T | 5.7% | T487N (ACC→AAC) | CIW80_RS12915 ← | PRD domain‑containing protein |
| JC | NZ_CP022686 | 2,590,563 | +TTGG | 100% | coding (109/153 nt) | CIW80_RS26455 → | hypothetical protein |
| RA | NZ_CP022686 | 2,703,299 | A→C | 7.5% | intergenic (‑203/‑277) | yieP ← / → CIW80_RS13540 | FadR/GntR family transcriptional regulator/16S ribosomal RNA |
| RA | NZ_CP022686 | 2,717,400 | T→G | 6.6% | L101V (TTA→GTA) | ilvA → | threonine ammonia‑lyase, biosynthetic |
| RA | NZ_CP022686 | 2,736,586 | A→C | 8.4% | Y183S (TAC→TCC) | rffA → | dTDP‑4‑amino‑4,6‑dideoxygalactose transaminase |
| RA | NZ_CP022686 | 2,737,495 | T→G | 6.1% | L109V (TTG→GTG) | wzxE → | lipid III flippase WzxE |
| RA | NZ_CP022686 | 2,743,563 | T→G | 10.1% | noncoding (65/87 nt) | CIW80_RS13750 → | tRNA‑Leu |
| RA | NZ_CP022686 | 2,747,591 | T→G | 5.4% | N395T (AAC→ACC) | hemY ← | protoheme IX biogenesis protein HemY |
| RA | NZ_CP022686 | 2,758,153 | A→C | 9.4% | T49P (ACG→CCG) | yifL → | lipoprotein |
| RA | NZ_CP022686 | 2,769,166 | C→A | 14.6% | C57F (TGC→TTC) | rarD ← | EamA family transporter RarD |
| RA | NZ_CP022686 | 2,769,186 | C→A | 14.3% | M50I (ATG→ATT) | rarD ← | EamA family transporter RarD |
| RA | NZ_CP022686 | 2,808,127 | T→G | 8.4% | V441G (GTC→GGC) | ubiB → | ubiquinone biosynthesis regulatory protein kinase UbiB |
| RA | NZ_CP022686 | 2,821,644 | A→C | 8.4% | intergenic (+100/‑278) | hemG → / → CIW80_RS14130 | menaquinone‑dependent protoporphyrinogen IX dehydrogenase/16S ribosomal RNA |
| RA | NZ_CP022686 | 2,849,863 | G→T | 8.8% | I174I (ATC→ATA) | CIW80_RS14255 ← | DeoR/GlpR family DNA‑binding transcription regulator |
| RA | NZ_CP022686 | 2,852,911 | T→G | 8.8% | G172G (GGT→GGG) | CIW80_RS14270 → | aldolase |
| RA | NZ_CP022686 | 2,868,740 | T→G | 23.7% | Q22P (CAG→CCG) | fdoH ← | formate dehydrogenase O subunit beta |
| RA | NZ_CP022686 | 2,871,422 | T→G | 7.8% | N149T (AAC→ACC) | fdnG ← | formate dehydrogenase‑N subunit alpha |
| RA | NZ_CP022686 | 2,871,449 | T→G | 6.4% | D140A (GAC→GCC) | fdnG ← | formate dehydrogenase‑N subunit alpha |
| RA | NZ_CP022686 | 2,904,852 | T→G | 9.3% | T239P (ACG→CCG) | ftsN ← | cell division protein FtsN |
| RA | NZ_CP022686 | 2,904,915 | T→G | 5.3% | T218P (ACC→CCC) | ftsN ← | cell division protein FtsN |
| RA | NZ_CP022686 | 2,937,218 | C→A | 9.4% | E216* (GAA→TAA) | yijO ← | AraC family transcriptional regulator |
| RA | NZ_CP022686 | 2,937,239 | T→G | 9.3% | T209P (ACG→CCG) | yijO ← | AraC family transcriptional regulator |
| RA | NZ_CP022686 | 2,989,627 | T→G | 9.6% | Q39H (CAA→CAC) | thiC ← | phosphomethylpyrimidine synthase ThiC |
| RA | NZ_CP022686 | 3,017,622 | A→C | 12.7% | K839N (AAA→AAC) | metH → | methionine synthase |
| RA | NZ_CP022686 | 3,020,229 | T→G | 12.3% | V133G (GTC→GGC) | yjbB → | Na/Pi cotransporter family protein |
| RA | NZ_CP022686 | 3,098,847 | A→C | 6.3% | intergenic (+17/+22) | CIW80_RS15415 → / ← actP | LrgB family protein/cation/acetate symporter ActP |
| RA | NZ_CP022686 | 3,136,940 | T→G | 10.4% | D161A (GAC→GCC) | phnN ← | ribose 1,5‑bisphosphokinase |
| RA | NZ_CP022686 | 3,136,948 | G→T | 9.3% | L158L (CTC→CTA) | phnN ← | ribose 1,5‑bisphosphokinase |
| RA | NZ_CP022686 | 3,151,862 | T→G | 6.7% | F176V (TTT→GTT) | proP → | glycine betaine/L‑proline transporter ProP |
| JC | NZ_CP022686 | 3,196,873 | +GCGTAATCGGTT | 100% | coding (944/1122 nt) | ampC ← | BlaEC family class C beta‑lactamase |
| RA | NZ_CP022686 | 3,200,595 | A→C | 5.7% | V199G (GTT→GGT) | frdA ← | fumarate reductase (quinol) flavoprotein subunit |
| RA | NZ_CP022686 | 3,209,121 | T→G | 6.1% | T236P (ACC→CCC) | rsgA ← | small ribosomal subunit biogenesis GTPase RsgA |
| RA | NZ_CP022686 | 3,218,260 | T→G | 7.3% | L233R (CTT→CGT) | miaA → | tRNA (adenosine(37)‑N6)‑dimethylallyltransferase MiaA |
| RA | NZ_CP022686 | 3,252,190 | T→G | 13.4% | K221N (AAA→AAC) | CIW80_RS16225 ← | enoyl‑CoA hydratase/isomerase family protein |
| RA | NZ_CP022686 | 3,348,371 | T→G | 9.7% | intergenic (‑187/‑13) | CIW80_RS16685 ← / → CIW80_RS26495 | inovirus Gp2 family protein/hypothetical protein |
| RA | NZ_CP022686 | 3,363,104 | C→A | 5.9% | H5N (CAT→AAT) | CIW80_RS16820 → | Alw26I/Eco31I/Esp3I family type II restriction adenine‑specific DNA‑methyltransferase |
| RA | NZ_CP022686 | 3,424,795 | A→C | 100% | intergenic (‑41/+27) | yjiJ ← / ← yjiK | MFS transporter/YjiK family protein |
| RA | NZ_CP022686 | 3,444,704 | T→G | 15.7% | T530P (ACC→CCC) | btsT ← | pyruvate/proton symporter BtsT |
| RA | NZ_CP022686 | 3,461,224 | T→G | 14.9% | intergenic (‑33/+2) | CIW80_RS17335 ← / ← CIW80_RS17340 | tRNA‑Leu/tRNA‑Leu |
| RA | NZ_CP022686 | 3,461,229 | T→G | 18.0% | noncoding (84/87 nt) | CIW80_RS17340 ← | tRNA‑Leu |
| RA | NZ_CP022686 | 3,461,247 | A→C | 14.2% | noncoding (66/87 nt) | CIW80_RS17340 ← | tRNA‑Leu |
| RA | NZ_CP022686 | 3,469,922 | C→G | 6.7% | A123P (GCC→CCC) | yjjW ← | YjjW family glycine radical enzyme activase |
| RA | NZ_CP022686 | 3,516,075 | T→G | 8.3% | V213G (GTG→GGG) | nhaA → | Na+/H+ antiporter NhaA |
| RA | NZ_CP022686 | 3,516,093 | T→G | 6.3% | V219G (GTG→GGG) | nhaA → | Na+/H+ antiporter NhaA |
| MC JC | NZ_CP022686 | 3,559,837 | Δ2,343 bp | 100% | coding (10‑2352/2352 nt) | polB ← | DNA polymerase II |
| RA | NZ_CP022686 | 3,604,564 | G→T | 20.3% | intergenic (+80/‑151) | lpxC → / → secM | UDP‑3‑O‑acyl‑N‑acetylglucosamine deacetylase/secA translation cis‑regulator SecM |
| RA | NZ_CP022686 | 3,652,079 | T→G | 11.1% | intergenic (‑88/+24) | panB ← / ← CIW80_RS18255 | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase/fimbrial‑like adhesin |
| RA | NZ_CP022686 | 3,652,090 | T→G | 9.1% | intergenic (‑99/+13) | panB ← / ← CIW80_RS18255 | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase/fimbrial‑like adhesin |
| RA | NZ_CP022686 | 3,656,188 | A→G | 100% | S549P (TCC→CCC) | htrE ← | outer membrane usher protein |
| RA | NZ_CP022686 | 3,657,091 | C→A | 9.4% | E248* (GAA→TAA) | htrE ← | outer membrane usher protein |
| RA | NZ_CP022686 | 3,661,518 | C→A | 16.8% | C9F (TGC→TTC) | pcnB ← | polynucleotide adenylyltransferase PcnB |
| RA | NZ_CP022686 | 3,665,943 | A→C | 8.8% | K474N (AAA→AAC) | hrpB → | ATP‑dependent helicase HrpB |
| RA | NZ_CP022686 | 3,703,648 | A→C | 6.5% | T120P (ACG→CCG) | fabZ → | 3‑hydroxyacyl‑ACP dehydratase FabZ |
| RA | NZ_CP022686 | 3,734,367 | T→G | 22.6% | F225V (TTT→GTT) | yafD → | endonuclease/exonuclease/phosphatase family protein |
| RA | NZ_CP022686 | 3,734,380 | T→G | 15.3% | L229R (CTC→CGC) | yafD → | endonuclease/exonuclease/phosphatase family protein |
| RA | NZ_CP022686 | 3,734,403 | C→G | 7.2% | L237V (CTG→GTG) | yafD → | endonuclease/exonuclease/phosphatase family protein |
| RA | NZ_CP022686 | 3,770,508 | T→G | 9.0% | intergenic (‑244/+219) | CIW80_RS26265 ← / ← CIW80_RS18890 | ATP‑binding protein/hypothetical protein |
| RA | NZ_CP022686 | 3,770,524 | T→G | 5.3% | intergenic (‑260/+203) | CIW80_RS26265 ← / ← CIW80_RS18890 | ATP‑binding protein/hypothetical protein |
| RA | NZ_CP022686 | 3,792,805 | A→G | 100% | Y421C (TAC→TGC) | fucP → | L‑fucose:H+ symporter permease |
| RA | NZ_CP022686 | 3,797,481 | T→G | 13.5% | L130V (TTA→GTA) | CIW80_RS19065 → | LacI family DNA‑binding transcriptional regulator |
| RA | NZ_CP022686 | 3,798,080 | T→G | 5.4% | R329R (CGT→CGG) | CIW80_RS19065 → | LacI family DNA‑binding transcriptional regulator |
| RA | NZ_CP022686 | 3,811,480 | G→T | 42.5% | G122C (GGT→TGT) | CIW80_RS19090 → | hypothetical protein |
| MC JC | NZ_CP022686 | 3,844,426 | Δ1,036 bp | 100% | coding (2‑1037/1056 nt) | dinB → | DNA polymerase IV |
| RA | NZ_CP022686 | 3,868,846 | T→G | 8.7% | T383P (ACG→CCG) | ecpC ← | fimbrial usher EcpC |
| RA | NZ_CP022686 | 3,928,345 | T→G | 8.0% | F277V (TTC→GTC) | prpE → | propionate‑‑CoA ligase |
| RA | NZ_CP022686 | 3,928,369 | T→G | 9.3% | W285G (TGG→GGG) | prpE → | propionate‑‑CoA ligase |
| RA | NZ_CP022686 | 3,932,443 | C→A | 16.0% | E184* (GAA→TAA) | lacA ← | galactoside O‑acetyltransferase |
| RA | NZ_CP022686 | 3,935,324 | T→G | 12.9% | N705T (AAC→ACC) | lacZ ← | beta‑galactosidase |
| RA | NZ_CP022686 | 3,940,707 | A→C | 9.6% | F314V (TTT→GTT) | frmA ← | S‑(hydroxymethyl)glutathione dehydrogenase |
| RA | NZ_CP022686 | 3,949,969 | T→G | 9.2% | D141A (GAC→GCC) | hemB ← | porphobilinogen synthase |
| RA | NZ_CP022686 | 3,977,655 | A→C | 5.5% | K88T (AAA→ACA) ‡ | phoR → | phosphate regulon sensor histidine kinase PhoR |
| RA | NZ_CP022686 | 3,977,656 | A→C | 8.4% | K88N (AAA→AAC) ‡ | phoR → | phosphate regulon sensor histidine kinase PhoR |
| RA | NZ_CP022686 | 3,981,933 | T→G | 9.4% | intergenic (+70/‑86) | proY → / → malZ | proline‑specific permease ProY/maltodextrin glucosidase |
| RA | NZ_CP022686 | 4,004,135 | T→G | 7.7% | R29R (CGT→CGG) | yajQ → | nucleotide binding protein YajQ |
| RA | NZ_CP022686 | 4,014,238 | C→G | 11.6% | intergenic (+84/‑260) | bolA → / → tig | transcriptional regulator BolA/trigger factor |
| RA | NZ_CP022686 | 4,014,242 | A→T | 12.9% | intergenic (+88/‑256) | bolA → / → tig | transcriptional regulator BolA/trigger factor |
| RA | NZ_CP022686 | 4,014,291 | G→T | 20.4% | intergenic (+137/‑207) | bolA → / → tig | transcriptional regulator BolA/trigger factor |
| RA | NZ_CP022686 | 4,032,265 | A→C | 8.4% | Q97H (CAA→CAC) | glnK → | P‑II family nitrogen regulator |
| RA | NZ_CP022686 | 4,056,951 | C→A | 15.5% | H134N (CAC→AAC) | adk → | adenylate kinase |
| RA | NZ_CP022686 | 4,056,962 | C→A | 20.0% | F137L (TTC→TTA) | adk → | adenylate kinase |
| RA | NZ_CP022686 | 4,061,217 | A→C | 5.4% | L431R (CTG→CGG) | ybaL ← | YbaL family putative K(+) efflux transporter |
| RA | NZ_CP022686 | 4,213,260 | T→G | 8.1% | C188W (TGT→TGG) | ubiF → | 3‑demethoxyubiquinol 3‑hydroxylase |
| RA | NZ_CP022686 | 4,213,266 | A→T | 8.7% | L190F (TTA→TTT) | ubiF → | 3‑demethoxyubiquinol 3‑hydroxylase |
| RA | NZ_CP022686 | 4,214,103 | T→A | 9.1% | intergenic (‑3/+35) | CIW80_RS21080 ← / ← CIW80_RS21085 | tRNA‑Gln/tRNA‑Gln |
| RA | NZ_CP022686 | 4,214,435 | G→C | 10.0% | intergenic (‑8/+27) | CIW80_RS21095 ← / ← CIW80_RS21100 | tRNA‑Gln/tRNA‑Gln |
| RA | NZ_CP022686 | 4,214,457 | G→T | 12.5% | intergenic (‑30/+5) | CIW80_RS21095 ← / ← CIW80_RS21100 | tRNA‑Gln/tRNA‑Gln |
| RA | NZ_CP022686 | 4,234,411 | C→A | 13.7% | intergenic (+111/‑331) | glnS → / → chiP | glutamine‑‑tRNA ligase/chitoporin |
| RA | NZ_CP022686 | 4,272,588 | T→G | 7.3% | G139G (GGT→GGG) | odhB → | 2‑oxoglutarate dehydrogenase complex dihydrolipoyllysine‑residue succinyltransferase |
| RA | NZ_CP022686 | 4,280,095 | T→G | 7.8% | G103G (GGT→GGG) | cydB → | cytochrome d ubiquinol oxidase subunit II |
| RA | NZ_CP022686 | 4,283,890 | A→C | 7.7% | K268N (AAA→AAC) | tolA → | cell envelope integrity protein TolA |
| RA | NZ_CP022686 | 4,286,467 | T→G | 5.4% | V42G (GTC→GGC) | cpoB → | cell division protein CpoB |
| RA | NZ_CP022686 | 4,287,463 | T→A | 6.4% | noncoding (54/76 nt) | CIW80_RS21475 → | tRNA‑Val |
| RA | NZ_CP022686 | 4,327,816 | T→G | 5.5% | F110V (TTC→GTC) | ybhM → | Bax inhibitor‑1/YccA family protein |
| RA | NZ_CP022686 | 4,368,372 | T→G | 10.8% | S37R (AGC→CGC) | ybiY ← | glycyl‑radical enzyme activating protein |
| RA | NZ_CP022686 | 4,440,334 | A→T | 16.6% | Q797H (CAA→CAT) | ftsK → | DNA translocase FtsK |
| RA | NZ_CP022686 | 4,470,157 | T→G | 6.1% | V81G (GTC→GGC) | lpxK → | tetraacyldisaccharide 4'‑kinase |
| RA | NZ_CP022686 | 4,485,614 | T→G | 9.1% | F139V (TTT→GTT) | gloC → | hydroxyacylglutathione hydrolase GloC |
| RA | NZ_CP022686 | 4,587,091 | T→G | 15.2% | N609T (AAC→ACC) | CIW80_RS22915 ← | enterotoxin |
| RA | NZ_CP022686 | 4,587,135 | T→G | 7.3% | K594N (AAA→AAC) | CIW80_RS22915 ← | enterotoxin |
| RA | NZ_CP022686 | 4,632,182 | T→G | 11.9% | R276R (CGT→CGG) | mchF → | microcin export transporter peptidase/ATP‑binding subunit MchF |
| RA | NZ_CP022686 | 4,642,951 | A→C | 6.8% | N732T (AAC→ACC) | sfaF → | S/F1C fimbrial usher SfaF/FocD |
| RA | NZ_CP022686 | 4,655,834 | A→C | 7.1% | R390R (CGT→CGG) | iroC ← | salmochelin/enterobactin export ABC transporter IroC |
| RA | NZ_CP022686 | 4,678,037 | C→A | 13.7% | intergenic (+35/‑86) | agn43 → / → CIW80_RS23450 | autotransporter adhesin Ag43/hypothetical protein |
| RA | NZ_CP022686 | 4,678,041 | A→C | 17.1% | intergenic (+39/‑82) | agn43 → / → CIW80_RS23450 | autotransporter adhesin Ag43/hypothetical protein |
| RA | NZ_CP022686 | 4,678,047 | A→C | 23.4% | intergenic (+45/‑76) | agn43 → / → CIW80_RS23450 | autotransporter adhesin Ag43/hypothetical protein |
| RA | NZ_CP022686 | 4,764,877 | T→G | 17.0% | intergenic (‑57/‑204) | ycfT ← / → lolC | acyltransferase family protein/lipoprotein‑releasing ABC transporter permease subunit LolC |
| RA | NZ_CP022686 | 4,764,880 | T→G | 10.4% | intergenic (‑60/‑201) | ycfT ← / → lolC | acyltransferase family protein/lipoprotein‑releasing ABC transporter permease subunit LolC |
| RA | NZ_CP022686 | 4,764,883 | A→T | 9.6% | intergenic (‑63/‑198) | ycfT ← / → lolC | acyltransferase family protein/lipoprotein‑releasing ABC transporter permease subunit LolC |
| RA | NZ_CP022686 | 4,764,904 | G→T | 7.6% | intergenic (‑84/‑177) | ycfT ← / → lolC | acyltransferase family protein/lipoprotein‑releasing ABC transporter permease subunit LolC |
| RA | NZ_CP022686 | 4,809,441 | T→G | 10.3% | G50G (GGT→GGG) | CIW80_RS24260 → | head‑tail joining protein |
| RA | NZ_CP022686 | 4,809,446 | C→G | 15.8% | A52G (GCC→GGC) | CIW80_RS24260 → | head‑tail joining protein |
| RA | NZ_CP022686 | 4,814,990 | T→G | 9.2% | F71V (TTT→GTT) | CIW80_RS24295 → | phage tail protein |
| RA | NZ_CP022686 | 4,815,879 | T→G | 14.6% | F23V (TTC→GTC) | CIW80_RS24305 → | C40 family peptidase |
| RA | NZ_CP022686 | 4,839,701 | G→T | 10.6% | A139A (GCC→GCA) | minD ← | septum site‑determining protein MinD |
| MC JC | NZ_CP022686 | 4,844,868 | Δ1,662 bp | 100% | [umuD]–[umuC] | [umuD], [umuC] | |
| RA | NZ_CP022686 | 4,850,783 | C→A | 9.1% | M215I (ATG→ATT) | ycgB ← | SpoVR family protein |
| RA | NZ_CP022686 | 4,855,492 | A→C | 8.3% | L146R (CTT→CGT) | cvrA ← | potassium/proton antiporter |
| RA | NZ_CP022686 | 4,870,912 | Δ1 bp | 100% | intergenic (‑108/‑120) | dhaK ← / → dhaR | dihydroxyacetone kinase subunit DhaK/dihydroxyacetone kinase operon transcriptional regulator DhaR |
| RA | NZ_CP022686 | 4,909,108 | A→T | 8.4% | intergenic (‑5/+42) | CIW80_RS24835 ← / ← CIW80_RS24840 | RtT sRNA/tRNA‑Tyr |
| RA | NZ_CP022686 | 4,916,128 | A→C | 8.0% | intergenic (+255/+30) | tdk → / ← CIW80_RS24885 | thymidine kinase/IS4 family transposase |
| RA | NZ_CP022686 | 4,918,846 | C→A | 6.9% | Q387H (CAG→CAT) | adhE ← | bifunctional acetaldehyde‑CoA/alcohol dehydrogenase |
| RA | NZ_CP022686 | 4,919,017 | T→G | 8.8% | E330D (GAA→GAC) | adhE ← | bifunctional acetaldehyde‑CoA/alcohol dehydrogenase |
| RA | NZ_CP022686 | 4,952,020 | T→G | 9.7% | V205G (GTC→GGC) | topA → | type I DNA topoisomerase |
| RA | NZ_CP022686 | 5,001,157 | G→T | 15.0% | D161Y (GAT→TAT) | ompG → | monomeric porin OmpG |
| RA | NZ_CP022686 | 5,023,944 | T→G | 7.2% | intergenic (+210/‑268) | zntB → / → dbpA | zinc transporter ZntB/ATP‑dependent RNA helicase DbpA |
| RA | NZ_CP022686 | 5,042,172 | T→A | 9.6% | S601R (AGT→AGA) | CIW80_RS25525 → | EntS/YbdA MFS transporter |
| RA | NZ_CP022686 | 5,043,648 | G→C | 6.1% | V1093V (GTG→GTC) | CIW80_RS25525 → | EntS/YbdA MFS transporter |
| RA | NZ_CP022686 | 5,043,855 | T→A | 13.1% | G1162G (GGT→GGA) | CIW80_RS25525 → | EntS/YbdA MFS transporter |
| RA | pHH‑29_RBS | 1,534 | G→A | 100% | W12* (TGG→TGA) | Aldafermin (NGM282) → | |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NZ_MW240712 | 206–2618 | 3084–2956 | 339–2879 | 12913 [12722] | [12418] 13320 | JNG15_RS00005–mobA | JNG15_RS00005,JNG15_RS00010,JNG15_RS00015,mobA |
| * | * | ÷ | pHH‑29_RBS | 2777–2897 | 5512–3245 | 349–2736 | 6343 [6102] | [6273] 7047 | putative HTH domain protein (MarR‑like)–hypothetical protein | putative HTH domain protein (MarR‑like),putative HTH domain protein,uncharacterized protein,hypothetical protein |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP022686 | 262466 = | 2 (0.010) | 199 (0.840) | 71/248 | NT | 99.0% | coding (320/1647 nt) | fadK | medium‑chain fatty‑acid‑‑CoA ligase |
| ? | NZ_CP022686 | = 1524130 | NA (NA) | intergenic (+8/+232) | CIW80_RS07590/syd | IS3‑like element ISEc52 family transposase/SecY‑interacting protein | |||||
| * | ? | NZ_CP022686 | = 262468 | 1 (0.000) | 192 (0.810) | 74/248 | NT | 99.5% | coding (322/1647 nt) | fadK | medium‑chain fatty‑acid‑‑CoA ligase |
| ? | NZ_CP022686 | = 1761697 | NA (NA) | intergenic (‑72/‑70) | CIW80_RS08710/CIW80_RS08720 | IS3‑like element ISEc52 family transposase/IS3‑like element IS600 family transposase | |||||
| * | ? | NZ_CP022686 | 3899666 = | 215 (0.910) | 81 (0.390) | 46/216 | NT | 32.3% | intergenic (‑40/+290) | hyxR/ipbA | LuxR family transcriptional regulator HyxR/tyrosine‑type DNA invertase IpbA |
| ? | NZ_CP022686 | 3899944 = | 153 (0.740) | intergenic (‑318/+12) | hyxR/ipbA | LuxR family transcriptional regulator HyxR/tyrosine‑type DNA invertase IpbA | |||||
| * | ? | NZ_CP022686 | = 3899681 | 206 (0.870) | 74 (0.360) | 48/216 | NT | 30.8% | intergenic (‑55/+275) | hyxR/ipbA | LuxR family transcriptional regulator HyxR/tyrosine‑type DNA invertase IpbA |
| ? | NZ_CP022686 | = 3899927 | 153 (0.740) | intergenic (‑301/+29) | hyxR/ipbA | LuxR family transcriptional regulator HyxR/tyrosine‑type DNA invertase IpbA | |||||