| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP022686 | 1,237,928 | G→C | 12.6% | L300V (CTG→GTG) | tmcA ← | tRNA cytosine(34) acetyltransferase TmcA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP022686 | 1,237,928 | 0 | G | C | 12.6% | 438.1 / 13.2 | 190 | L300V (CTG→GTG) | tmcA | tRNA cytosine(34) acetyltransferase TmcA |
| Reads supporting (aligned to +/- strand): ref base G (97/64); new base C (3/23); total (101/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.87e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 192 total aligned reads displayed.
TGTGGTGTATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGCTTCATCGACCACCAGCCAATCGGC > NZ_CP022686/1237789‑1238060 | tgtgGTGTATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCATCGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAg > 5:20385/1‑140 (MQ=255)tgtgGTGTATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAg > 5:186371/1‑140 (MQ=255) tggtgTATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCa > 1:151161/1‑140 (MQ=255) tggtgTATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCa > 1:817485/1‑140 (MQ=255) tggtgTATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTAAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCa > 7:302179/1‑140 (MQ=255) tATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCTAAATTTCAGCaaaaaa > 5:91155/1‑140 (MQ=255) tATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCaaaaaa > 1:1103553/1‑140 (MQ=255) tATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCaaaaaa > 5:347527/1‑140 (MQ=255) tATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCaaaaaa > 5:313814/1‑140 (MQ=255) tATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCaaaaaa > 5:115856/1‑140 (MQ=255) tATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCaaaaaa > 1:1631/1‑140 (MQ=255) gtGGGTTAAGTTTTAATCGTCAAACACAAGTGCCTCAAAAACATTTTTATCCAGCGGGCAACCCTGCGCCCAACGGATCGGCTTTTGTAGTTCAAAACGGTGTAATTGCGTAAAGCGAGCGCAAAATTTCAGAAAAAAAc < 6:1004953/139‑1 (MQ=255) gggTTAATTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGAATCCCTGCGCCCAACGTATCGGCTGTTGTAGTTAAAACGGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCa < 7:709246/140‑1 (MQ=255) gTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACg > 8:495912/1‑140 (MQ=255) aaGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTcc > 5:1040665/1‑140 (MQ=255) aaGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTcc > 8:772205/1‑140 (MQ=255) gTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCgg > 2:994396/1‑140 (MQ=255) ttttCATCTTCAAACACCAGGGCCTCACTAACCATTTTTGCCCGCCGGCATCCCTGCGCCCAACGGACCGGCTGTTGTAGTTAAAAACGGTGTAAATGCGTAATGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGt < 8:286298/140‑1 (MQ=255) ttttCATCGTCAACACCCCGTGCAGAACTACCCATTTTTTCCAGCGGGCATCCCTGCGCCAAACGTATCGGCTGTTTTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGt < 2:480031/140‑1 (MQ=255) ttttCATCGTCAAACACCGGTGCCTCACTAACCATTTTTTCCAGCGGGCAGCCCTGCGCCCAACGGATGGGCTGTTGTAGTTCAAAAGGGTTTAAATGCGTAAAGCGAGCGCAAATTTTCAGCAAAAAACCACGTCCGGt < 2:790594/140‑1 (MQ=255) ttttCAGGGTCAAACACCAGTGCCTCACAACCCATTTTTTCCCGCGGGCATCCCTGCGCCCAACGGACGGGCTGTTGTTGTTCAAAACGGTGTAAAGGCGGAAAGCGAGCTAAAAATTTCATCAAAAAACCACGTCCGGt < 2:369202/140‑1 (MQ=255) ttCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGc > 5:1004953/1‑140 (MQ=255) cGTCAACCACCAGTGCAGCAATAACTCTTTATTCATGGGGGCATCGCTGGGCCCAAGGGCGCGGCTGTTGTTGTTCAAAGGGGTTTAAATGGGGCAGGGTTGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCg < 6:210367/140‑1 (MQ=255) cGTCAAACCCCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCg < 8:358030/140‑1 (MQ=255) cGTCAAACCCAAGTGCCTCACTAACCATTTTTTCCAGCGGGAAGCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGTTGTAAATGCGTAAAGCGAGCGCAAAATTTCAGAAAAAAACCACGTCCGGTGCCTTCg < 3:192088/140‑1 (MQ=255) cGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCg < 6:299176/140‑1 (MQ=255) cGTCAAACACCAGTGCCTCAATACCAATTTTTTCCCGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAACCCACGTCCGGTGCCTTCg < 2:167075/140‑1 (MQ=255) cGTCAAACACCAGTGCCTCAATAACCATTTTTACCAGCGGCCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTTTAAATGCGCAAAGCTAGCGCAAAATTACACCAAAAAACCACGTCCGGTGCCTTCg < 7:390724/140‑1 (MQ=255) tCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTa > 3:266621/1‑140 (MQ=255) tCAAACACCAGTGCCTCACTAACCATTTTTTACAGCGGGCATCCCTGCGCCCAACGCATCGGCTGTAGTAGTTCAAAACGGTGTAAATGCGCAAAGCGAGCGCAAAATTTCAGCAAAAAAACACGTCCGGAGCAGTCGTa > 4:306014/1‑140 (MQ=255) cAAACACCCGGGCCTCACTAACCATTTTTACCAGCGGGCACCCCTGCGCCCAACGGATCGGCTGTTTTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGAAAAATTTCAGCAAAAACCCACGTCCGGTGCCTTCGTAg < 3:273780/140‑1 (MQ=255) aaaaCACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAg < 4:1063011/139‑1 (MQ=255) accacCTGTGCCTCACAAACCATTTTTTCCAGCGGGCAGCCCTGCGCCCACCGGCTGGGCGGTTGTAGACAAAACCGGTGAAACGGCGCAACGCGAGCTCAAAATTGCACCAAAAAACCACGTCCGGTGCCTTCGTAGcc < 7:29665/138‑1 (MQ=255) aacaacTGTGCCTAACTAACCTTTTTTTCCTGCGGGAATCCCTCCGCCCACCGGAGCGGCTGTTGTAGTTAAAAACGGTGTAAATGCTTAAAGCGAGCGAAAAATTTCCGCAAAACACCACGTCCGGTGCCTTCGTAGcc < 3:498117/140‑1 (MQ=255) aaCACCAGTGCCTCACTACACATTTTTTCCAGCGGGCATCCCTGCGACTAACGGAGAGGCTGTTGTAGTTCAACACGGTTTAAATGCGTAAATCTAGCGCAAAATTTCAGAAAAAAACCACTTCCGGTGCCTTCGTAGcc < 8:304471/140‑1 (MQ=255) aaCACCAGTGCCTCACTAACCATTTTATCCAGCGGGCATCCCTGCGCCAAACGCATCGGAGGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGcc < 4:796137/140‑1 (MQ=255) aaCACCAGTCCCTCACTAACCTTTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCGGTTGTAGTTCAAACCGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAACCCACGTCCGGTGCCTTCGTAGcc < 1:876715/140‑1 (MQ=255) cccAGGGCCCCAAAAAGCATTTTTGCCAGCGGGCAACCCTGCGCCAACCGGATCGGCGGGTGAAGTTCAACACGGGGTAAATGCGGCATGCGAGCTAAAAATTTCCGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTg < 7:305365/139‑1 (MQ=255) ccatgTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGTCTCGGCGGTTGTAGTTCAAAACGGTGTAAATGCGGAACGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTg < 8:683834/136‑1 (MQ=255) acCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTGCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTg < 4:784146/140‑1 (MQ=255) acCAGTCCCTCACTAACAATTTTTTCCCGCGGGCATCCCGGCGCCCACCGGAGCGGCTGTTGTAGTTCAAACCGGTGTAAATGCGGAACGCGAGCGAAAAATTTCAGCAAAAACCCACGTCCGGTGCCTTCGTAGCCCTg < 8:455173/140‑1 (MQ=255) cAGTGCCACAATAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAACCGGTGTAAATGCGGAACGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCa < 4:380457/140‑1 (MQ=255) cAGTCCCTCAATAACAATTTTTTCCAGCGGGCATCCCTGCGCCAAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGTAACGCGAGCGCAAAATTGCACCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCa < 1:209113/140‑1 (MQ=255) gTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGATCCCAACGGATCGGCTGTTGTAGTTCAAAAAGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAAACACGTCCGGTGCCTGGGTAGCCCTGCAcc > 4:1039328/1‑140 (MQ=255) gTGCCTCACTAACCATTTTATCCAGCGGGAATCCCTGCGCACAACGGCTAGGCTGTTGTATTTAAAAAAGGAGTAAATGCGGAAATCGCGAGCAAAAATTCAGCAAAAAACCACGTCCGTTGCAGTCGTAGCCCTGCAcc > 2:281516/1‑140 (MQ=255) tGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCg > 4:211673/1‑140 (MQ=255) ccgcACTAACCATTTTTCCCTCCGGCCATCCCTGCGCCCACCGGTTCGGCTGTTGTAGTTCAAAACGGTGTAAAGGGGGACAGCGAGCGCAAAATTTCTCCAAAAACCCACGTCCGGGGCCTTCGTAGCCCTGCACCGTa < 7:205893/137‑1 (MQ=255) ccccccTACCCATTTTTTCCAGCGGGCCCCCCGGCGCCCAACGGCGCGGCTGATGTAGTTCAACAGGGTGTAAATCCGTAACGCGCGCGAAAAATTTCAGCAAAACCCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTa < 1:25700/135‑1 (MQ=255) ccTCACTAACCATTTTTTCCCGCGGGCACCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAAGGCGGAAAGCGAGCGAAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTa < 2:419197/140‑1 (MQ=255) ccTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTa > 6:831765/1‑140 (MQ=255) ccTCAATAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTCGTTCAAACCGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCACCAAAAACCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTa < 2:319618/140‑1 (MQ=255) ccTCAAAAACAATTTTTTCCAGCCGTCATCCCTCCGCCAAACGCCTCGCCTGTTGTAGTTAAAACCGTTGTAAAGGCGGAAAGCGAGATCAAAATTGCATCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTa < 4:656185/140‑1 (MQ=255) cccACTAACCATTTTTTCCCCCGGGCATCCCGGCGCCCACCGGCTCGGCTGTTGAATTTCAAAACGTTGTAAATGCGGAAAGCGAGCCAAAAATTTCCGAAAAAACCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAg < 7:603179/138‑1 (MQ=255) acacaacccATTTTTTCCCGCGGGCACCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGGGTAAATGCGGAAAGCGAGCGCAAAATTTCACCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGt < 8:614179/133‑1 (MQ=255) cACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTg > 8:874973/1‑140 (MQ=255) cACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACCGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGATCAAAATTTCAGCAAAAAACCACGACAGGTGACTTCGTAGCCCTGCAcccaactt > 7:998913/1‑134 (MQ=255) cACTAACCATTTTTTCCAGCGGGCATACCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGAGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGtt > 1:437888/1‑139 (MQ=255) cTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGt > 8:413043/1‑140 (MQ=255) cTAACCAATATTTCCAGCCGGCATCCCAGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGAGGAAAGCGAGCGCAAAATTTAAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCAGCACCGTAGTGGt > 1:306849/1‑140 (MQ=255) aTTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACTTTGTAAATGCGTAAAGCGAGCGCAAAATTTCTGCAAAAAACAACGTCCGGTGCCTTCTTACCCATGCACCGAAGTGGTTacaaa > 5:65758/1‑136 (MQ=255) ttttCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTaacaactg > 7:909843/1‑138 (MQ=255) ttCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTc > 8:92164/1‑140 (MQ=255) cagcccTGCGCCCAAGGGAGCGCCTGTTGTAGTTCAAAACGGGGTAAATGCGGAAAGCGAGCTAAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAAcg < 1:671624/137‑1 (MQ=255) cgcACAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGAAGCCCTCAACCGTAGTTGTTAACAACGTTCGAGGAAAACGCGATACCa > 8:825762/1‑140 (MQ=255) aaCGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGa > 7:367347/1‑140 (MQ=255) aTCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGcaa > 8:729741/1‑140 (MQ=255) aTCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGcaa > 8:966697/1‑140 (MQ=255) aTCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGcaa > 8:839997/1‑140 (MQ=255) aTCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGcaa > 4:755310/1‑140 (MQ=255) ccGGCTGTTGGATTTCACACCGGGTTAAAGGCGGAAAGCTAGCGAAAAATATCACCAAAAACCCACGGCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGATAACATCGTTCGAGGAAAACGCGATACCAGTTGATGcaac < 7:132836/139‑1 (MQ=255) ggCTGTTGTAGTTCAAAACGGTGTAAATGGGGAAAGCGAGCGAAATATTTCAGCAAAAACCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGcaacaa < 4:651303/140‑1 (MQ=255) gCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCaacaac < 4:266621/140‑1 (MQ=255) cTGTTGTAGTGAAAAACGGTGAAATTGCGTAAAGGGAGCGCAAAATTACACAAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACg < 1:1036765/140‑1 (MQ=255) tttgtAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGAAAAATTTAAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAATACGCGATACCAGTTGATGCAACAACGgc < 2:1103553/139‑1 (MQ=255) gttgtAGTTCAAACCGGTGTAATCGCTGAACGCGAGCGCAAAATTTAAGCAACAAACCACGTCCGTTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCACCAACGgc < 8:996304/140‑1 (MQ=255) gttgtACTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAAATGCAGCAAACAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGgc < 7:17067/140‑1 (MQ=255) ttgtAGTTCAAAACGGTGTAACTGCGGAAAGCGAGCGCAAAATTTCCCCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGgcg < 6:561675/140‑1 (MQ=255) ttgtAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGgcg > 7:693552/1‑140 (MQ=255) ttgtAGTTAAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAATCGCGAGACCAGTTGATGCAACAACGgcg > 4:532947/1‑140 (MQ=255) ttCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCCCGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGta > 8:278749/1‑140 (MQ=255) tCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGtat > 3:727993/1‑140 (MQ=255) cAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGtata > 6:590330/1‑140 (MQ=255) tgtAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAACCGCGATACCAGTTGATGCAACAACGGCGCAGGTATCGCTGCGGc > 4:851963/1‑140 (MQ=255) tgtAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACTCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCgtc > 3:396594/1‑138 (MQ=255) tgtAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGTCGCAGGTATAGCTGCGGc > 3:794229/1‑140 (MQ=255) tgtAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGc > 2:332898/1‑140 (MQ=255) tgtAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGc > 3:108475/1‑140 (MQ=255) tgtAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGc > 4:201608/1‑140 (MQ=255) tgtAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGc > 6:314219/1‑140 (MQ=255) gCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAACCGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGCTTCATCg > 3:638290/1‑140 (MQ=255) gCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGCTTCATCg > 5:461693/1‑140 (MQ=255) taaaGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGCTTCATCGacc < 4:870012/139‑1 (MQ=255) gAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGc > 1:50348/1‑42 (MQ=255) gAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCg > 5:589665/1‑47 (MQ=255) gAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGgc < 2:176246/113‑1 (MQ=255) gAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGCTTCATCGacc > 5:1002564/1‑140 (MQ=255) gAAAGCGAGCGAAAAATTTCAGCAAAAAACCACGTCCGGTGc < 2:50348/42‑1 (MQ=255) gcgagcgCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGCTTCATCGAccacca < 4:108475/140‑1 (MQ=255) gcgaAAAATTTCAGCAAAAACCCCCGTCCGGGGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGCTTCATCGACCACCAGCCa < 2:110434/140‑1 (MQ=255) cAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGCTTCATCGACCACCAGCCAATc > 5:595493/1‑140 (MQ=255) | TGTGGTGTATGGGTGAAGTTTTCATCGTCAAACACCAGTGCCTCACTAACCATTTTTTCCAGCGGGCATCCCTGCGCCCAACGGATCGGCTGTTGTAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAACGGCGCAGGTATAGCTGCGGCTTCATCGACCACCAGCCAATCGGC > NZ_CP022686/1237789‑1238060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |