| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,318,606 | A→G | E190E (GAA→GAG) | sbrI → | ECF family RNA polymerase sigma factor SbrI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,318,606 | 0 | A | G | 99.8% | 2130.1 / NA | 572 | E190E (GAA→GAG) | sbrI | ECF family RNA polymerase sigma factor SbrI |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (279/291); minor base T (1/0); total (280/292) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 585 total aligned reads displayed.
GCCCGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAAGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAGGCGGCGCAT > NC_008463/2318459‑2318752 | gCCCGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAgga > 2:4568665/1‑150 (MQ=255)gCCCGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAgga < 1:3078652/150‑1 (MQ=255) ccGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGTGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGaggagg < 1:6652647/150‑1 (MQ=255) cGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGt > 1:1106118/1‑150 (MQ=255) gAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTg > 2:7831839/1‑150 (MQ=255) gAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCAGGAGACGGGTAAGCTCCGTTTCCGAAACGCGGTGCAGAAGCAGCTCCGGGTGCAGGGCGAGGGGGTg > 2:1060683/1‑150 (MQ=255) aGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTgg > 2:7587858/1‑150 (MQ=255) aGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTgg < 2:7500077/150‑1 (MQ=255) ggAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGc < 1:1806014/150‑1 (MQ=255) gAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCg > 2:2916280/1‑150 (MQ=255) aCAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGt > 1:2561766/1‑150 (MQ=255) aCAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGt > 1:2844027/1‑150 (MQ=255) cgcgAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGa < 1:3951078/150‑1 (MQ=255) gcgAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGaa > 2:9549582/1‑150 (MQ=255) gcgAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGaa > 1:242538/1‑150 (MQ=255) aGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAAccc < 1:8451540/150‑1 (MQ=255) tagtCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCcaca < 2:138562/147‑1 (MQ=255) tCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCAGCTGGCCGAGGAGGAGGCGGTATGAACCCACAGaa > 2:11097192/1‑150 (MQ=255) gATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCAt < 2:9688296/150‑1 (MQ=255) tGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTc > 1:1598673/1‑150 (MQ=255) gcgcgcCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGACGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTcc > 2:4912314/1‑150 (MQ=255) gcgcgcCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCCGTAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTcc > 1:1331994/1‑150 (MQ=255) gcgcgcCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTcc < 1:7848710/150‑1 (MQ=255) cgcCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCcgcg > 1:6203658/1‑150 (MQ=255) cgcCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCcgcg < 2:6239109/150‑1 (MQ=255) gcCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGGGAAGAGCCGTGTCCGCGACGCGGTGCCGAAGCTGCGCCGGCTGCTGGCCGCGGAGGTGGCGGGAGGAACCCACAGAAGCATTCCGCGa > 2:1076860/1‑150 (MQ=255) cACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCg < 1:2033854/150‑1 (MQ=255) aCGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGt > 2:3158503/1‑150 (MQ=255) aCGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGt > 2:10423106/1‑150 (MQ=255) gagaACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGACGCATTCCGCGAGCGTCGc < 2:2065886/150‑1 (MQ=255) agaACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGcc > 2:1034640/1‑150 (MQ=255) gaactggaactgGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCg < 1:6770018/150‑1 (MQ=255) aactggaactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGa < 2:6893146/150‑1 (MQ=255) ctggaactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAag < 2:2131912/150‑1 (MQ=255) ctggaactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAag < 1:3551598/150‑1 (MQ=255) tggaactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAaga < 2:9004023/150‑1 (MQ=255) gaactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGc < 2:9880866/150‑1 (MQ=255) gaactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGc > 1:10582343/1‑150 (MQ=255) aactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCa > 2:1684315/1‑150 (MQ=255) actggCCGAGATCGCCACGCTCACCCCGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAg < 1:875909/150‑1 (MQ=255) actggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAg < 1:4152303/150‑1 (MQ=255) ctggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGTGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGTGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGa > 2:8340547/1‑150 (MQ=255) ctggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGa > 1:3317642/1‑150 (MQ=255) ggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATg < 1:4875859/150‑1 (MQ=255) gCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAATCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGc > 1:6495631/1‑150 (MQ=255) cGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTg < 1:2244505/150‑1 (MQ=255) cGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTg < 1:10468948/150‑1 (MQ=255) aTCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGgcgc < 2:4200157/150‑1 (MQ=255) gCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCAtt < 2:729972/150‑1 (MQ=255) gCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCAtt > 1:581734/1‑150 (MQ=255) ccACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGTGGAGGTGGCGGTATGTACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCAttt > 2:3394939/1‑150 (MQ=255) cACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTc < 1:10835665/150‑1 (MQ=255) aCGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTcc > 2:5481274/1‑150 (MQ=255) aCGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTcc > 2:6035845/1‑150 (MQ=255) cGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCcg < 1:3705155/150‑1 (MQ=255) cTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCcgcg > 1:8576706/1‑150 (MQ=255) cACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGcc < 1:2979087/150‑1 (MQ=255) cACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGcc < 1:9686800/150‑1 (MQ=255) cACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGcc > 2:10111951/1‑150 (MQ=255) cccAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGATGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCAATCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCa > 1:9011976/1‑150 (MQ=255) aGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGGTGGCCGTGGTGGTGGCGGTATGAACCCACAGAAGCATTACGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCAcgc > 1:10237901/1‑150 (MQ=255) aGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCAcgc < 1:7504463/150‑1 (MQ=255) tCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACgcgc > 1:7141113/1‑150 (MQ=255) tCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACgcgc > 2:8157999/1‑150 (MQ=255) gccgcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGcgccg > 2:9746080/1‑150 (MQ=255) cgcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGCGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCgca > 1:7271617/1‑150 (MQ=255) cgcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCgca > 1:8261812/1‑150 (MQ=255) gcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGTAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCgcag > 1:9889262/1‑150 (MQ=255) gcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCgcag > 2:2685838/1‑150 (MQ=255) gcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCgcag < 1:8109122/150‑1 (MQ=255) gcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCgcag < 1:5377525/150‑1 (MQ=255) tGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCAGTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCgcagca < 1:3818593/150‑1 (MQ=255) ggAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGcagcag < 1:1460256/150‑1 (MQ=255) ggAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGcagcag < 1:10732979/150‑1 (MQ=255) gagaCGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGACGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCagcagc < 2:1894190/150‑1 (MQ=255) agaCGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAgcc < 1:4673388/150‑1 (MQ=255) agaCGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAgcc < 2:6699927/150‑1 (MQ=255) ggTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAgccggcg < 2:8587661/150‑1 (MQ=255) agagCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAgccggcgccggc > 2:3654641/1‑150 (MQ=255) ccGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTg < 1:631604/150‑1 (MQ=255) tttCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGAc > 2:7009035/1‑150 (MQ=255) ttCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGAcc > 1:5491857/1‑150 (MQ=255) ttCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGAcc < 2:5123117/150‑1 (MQ=255) gtCCGCTACGCGGTGCAGCAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGAcc < 2:9462068/149‑1 (MQ=255) tCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACACAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCa < 2:6648154/150‑1 (MQ=255) ccGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCTGCAGCCGGCGCCGGCGCTGGACCAg > 2:3904976/1‑150 (MQ=255) cGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAgg > 1:5057614/1‑150 (MQ=255) tACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCTGTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGa < 1:7658923/150‑1 (MQ=255) gcgGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCGGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATcc < 2:4363229/150‑1 (MQ=255) cgGTGCATAAGCTGCGCCGGCTGCTGGCCGTGGAGGTGGGGGTATGAACCCACAGAAGCATTCCGCGAGCGGCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCt < 1:7400607/150‑1 (MQ=255) aGAAGCTGCGCCGGCGGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCCTTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTcgccgc < 1:458592/150‑1 (MQ=255) gCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCcgcg > 1:4398541/1‑150 (MQ=255) tGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCcgcgcg > 1:10036944/1‑150 (MQ=255) cgcCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGAc < 1:9148109/150‑1 (MQ=255) ccGGCTGCTGGCCGAGGAGGTGGCGGTATGACCCCACAGACGCCGTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCCCGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGc < 2:8866479/150‑1 (MQ=255) ggCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCa > 1:6179177/1‑150 (MQ=255) ctgGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAggcgg > 2:2441015/1‑150 (MQ=255) gCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAGGCGgcgc > 2:5863608/1‑150 (MQ=255) ccGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAGGCGGCGCa < 1:2731232/150‑1 (MQ=255) ccGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAGGCGGCGCa > 1:9337141/1‑150 (MQ=255) | GCCCGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAAGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAGGCGGCGCAT > NC_008463/2318459‑2318752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |