| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 3,909,637 | (G)5→4 | intergenic (‑133/+14) | PA14_RS17840 ← / ← brnQ | DUF599 domain‑containing protein/branched‑chain amino acid transport system II carrier protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 3,909,633 | 0 | G | . | 98.7% | 1859.4 / 16.6 | 390 | intergenic (‑129/+18) | PA14_RS17840/brnQ | DUF599 domain‑containing protein/branched‑chain amino acid transport system II carrier protein |
| Reads supporting (aligned to +/- strand): ref base G (3/2); new base . (178/204); total (181/209) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 428 total aligned reads displayed.
AATGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTGGGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCG > NC_008463/3909484‑3909778 | aaTGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTg > 1:10126186/1‑150 (MQ=255)aaTGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTg < 1:574733/150‑1 (MQ=255)aaTGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTg > 2:9121863/1‑150 (MQ=255) tGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCTTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggg < 2:9566768/150‑1 (MQ=255) tGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggg > 2:2482947/1‑150 (MQ=255) tGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggg < 1:6271404/150‑1 (MQ=255) ccGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggt < 2:4646441/150‑2 (MQ=255) ccGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggt < 1:394688/150‑2 (MQ=255) ccGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggt < 1:1393533/150‑2 (MQ=255) cGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggtt > 1:1465927/1‑148 (MQ=255) gAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggttc > 1:4188574/1‑147 (MQ=255) aGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggttcg > 1:8869439/1‑146 (MQ=255) ttCGGCGGTCATGAAAACTCCCTCTGGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGcc < 1:8056263/150‑1 (MQ=255) ggcggTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGa > 1:2338297/1‑150 (MQ=255) ggcggTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGa < 2:3049402/150‑1 (MQ=255) gTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGtc < 2:5928159/150‑1 (MQ=255) tGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAg < 2:7093035/150‑1 (MQ=255) gAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAgg > 2:9040413/1‑150 (MQ=255) aCTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGAc < 1:4462572/150‑1 (MQ=255) cTCCCTCTTGTGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCGGACGTCTCAGTCGAcc > 2:6835585/1‑150 (MQ=255) tCCCTCGTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGGCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGCCGTCTCAGGCGACCg < 2:2038067/150‑1 (MQ=255) ccTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCt > 1:294285/1‑150 (MQ=255) ctctTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCtt > 1:8410772/1‑150 (MQ=255) ctctTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCtt < 1:9490096/150‑1 (MQ=255) tctTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTc > 1:5402190/1‑150 (MQ=255) ctTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcg > 2:878437/1‑150 (MQ=255) ctTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcg < 1:3502701/150‑1 (MQ=255) aGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcgcgcg < 2:3474485/150‑1 (MQ=255) ggccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCtt < 2:9237114/150‑1 (MQ=255) ggccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCtt < 1:8296960/150‑1 (MQ=255) gggAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGccc > 1:1146118/1‑150 (MQ=255) gggAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGccc < 1:6954194/150‑1 (MQ=255) ggAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCca > 1:2631134/1‑150 (MQ=255) gAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcag < 1:1799600/150‑1 (MQ=255) aaTCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcagc < 2:7167215/150‑1 (MQ=255) cgccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATc > 2:5541351/1‑150 (MQ=255) gccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCg > 2:10359772/1‑150 (MQ=255) gttgttTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCaa < 2:9208626/150‑1 (MQ=255) ttgttTCGCGCCGTTGGGACGCCTCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCaaa < 2:10654037/150‑1 (MQ=255) ttgttTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCaaa < 2:3820293/150‑1 (MQ=255) ttgtgTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCaaa < 2:3954715/150‑1 (MQ=255) ttCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGAc > 1:8774257/1‑150 (MQ=255) ttCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGAc < 2:4552308/150‑1 (MQ=255) ttCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGAc > 2:2712197/1‑150 (MQ=255) cgcgCCGTGGGGACGCCGATCGCCGCGGCCAGGACACTAATTTCGTCGGCTCATGAAAAAGGACGCCCGGAGGCGGCCTTCCTGGGGG‑TCGCCTGACGTCTCAGGCGACCGCTTCGGGCGGCTTGCCCAGCAGCCGATCGCAAACGACTg < 2:5675410/150‑1 (MQ=255) gcgcCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGc > 1:4930908/1‑150 (MQ=255) gcgcCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGc > 2:7933837/1‑150 (MQ=255) gTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGa < 2:3296098/150‑1 (MQ=255) ttGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCACACGACTGCCAGGAc > 2:9469456/1‑150 (MQ=255) gggACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCAGGAAAAAGGCCGCCCGGAGGCGGCCTTCCTGGGGG‑TCGCCTGACGTCTCATGCGACCGCTGCGCGCGTCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCa > 2:885934/1‑150 (MQ=255) ggACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAg < 1:10413346/150‑1 (MQ=255) ccgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCaa > 2:496007/1‑150 (MQ=255) ccgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCaa < 1:9355815/150‑1 (MQ=255) ccgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCaa < 2:1856206/150‑1 (MQ=255) gcgcgccgcGGCCCGGACACGACTGTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCATCCT‑GGGGTCCGCCTGACGTCACAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGGCGATCGCAAACGACTGCCAGGACCAGCGCAATg < 1:7832080/147‑1 (MQ=255) gcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCGTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATg > 1:4544426/1‑150 (MQ=255) cTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATTAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGCCCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATgg < 1:4701632/150‑1 (MQ=255) cTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATgg > 2:814012/1‑150 (MQ=255) cTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATgg > 1:158733/1‑150 (MQ=255) cTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATgg < 2:4254675/150‑1 (MQ=255) cgcgGCCAGGCCACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTACGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATAcc < 2:2831643/150‑1 (MQ=255) cgcgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATAcc < 2:5244818/150‑1 (MQ=255) gcgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCg > 1:5944202/1‑150 (MQ=255) cgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCgg < 1:3172458/150‑1 (MQ=255) ggCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgc < 1:6855196/150‑1 (MQ=255) gCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgca < 2:1594766/150‑1 (MQ=255) gCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgca > 1:5208089/1‑150 (MQ=255) aGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgcagca < 2:3225850/150‑1 (MQ=255) acacGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagcc > 2:2240329/1‑150 (MQ=255) cacGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagcca > 1:5028188/1‑150 (MQ=255) cacGACTGTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTACC‑AGGGGTTCGCCTCACGTCTCAGGCGACCGCTACGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagcca < 2:7811054/150‑1 (MQ=255) acGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagccag < 1:7386189/150‑1 (MQ=255) cGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagccagc < 1:4787073/150‑1 (MQ=255) cGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagccagc > 1:9263900/1‑150 (MQ=255) gACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCagccagcc > 1:7160653/1‑150 (MQ=255) cTTTCGTCGGCTCATGACAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTAGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCTGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCaa < 2:5748392/150‑1 (MQ=255) tttCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAg > 2:6087298/1‑150 (MQ=255) tcgtcgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGc < 2:10140552/150‑1 (MQ=255) cgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTg < 2:3341657/150‑1 (MQ=255) tCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCCGCAGCCAGCCAAGGCTCTGATCg > 2:6602973/1‑150 (MQ=255) tCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCg < 2:6397391/150‑1 (MQ=255) tCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCg < 1:1208763/150‑1 (MQ=255) cATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCgg < 1:7677164/150‑1 (MQ=255) aaaaaGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAg > 2:7570679/1‑150 (MQ=255) aaaaGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGc > 1:2535365/1‑150 (MQ=255) aaaGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCg < 1:8671505/150‑1 (MQ=255) aGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCggg < 1:10033253/150‑1 (MQ=255) aGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCggg < 1:6544560/150‑1 (MQ=255) gccgccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCTATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAg < 2:2919408/150‑1 (MQ=255) ccgccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGc < 2:8559810/150‑1 (MQ=255) cgccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCt < 2:9677332/150‑1 (MQ=255) cgccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCt < 1:9184078/150‑1 (MQ=255) ccGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTgg > 1:5100340/1‑150 (MQ=255) ggAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACAGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCg > 1:380780/1‑150 (MQ=255) aGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGaa < 2:3641676/150‑1 (MQ=255) ggcggcCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAg > 2:6181720/1‑150 (MQ=255) ggcCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACg > 2:1179386/1‑150 (MQ=255) ccTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTc < 2:1352162/150‑1 (MQ=255) cTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTcc > 2:6858050/1‑150 (MQ=255) ttCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGCTCCCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCg > 2:7425493/1‑150 (MQ=255) | AATGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTGGGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCG > NC_008463/3909484‑3909778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |