| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 4,819,717 | (C)5→4 | intergenic (‑115/+55) | PA14_RS22115 ← / ← lepB | DUF4845 domain‑containing protein/signal peptidase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 4,819,713 | 0 | C | . | 98.0% | 1640.9 / 18.4 | 344 | intergenic (‑111/+59) | PA14_RS22115/lepB | DUF4845 domain‑containing protein/signal peptidase I |
| Reads supporting (aligned to +/- strand): ref base C (0/7); new base . (172/165); total (172/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.47e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 365 total aligned reads displayed.
CCAGCAGGGACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAGCCCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCTTGCCG > NC_008463/4819563‑4819859 | cagcagGGACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGACAGCGGGGCTGCCCTCGGGAGCAGcc < 2:1990379/151‑1 (MQ=255) gggACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAGccccgct > 2:2784683/1‑148 (MQ=255) aTCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTcgcg > 1:10672287/1‑151 (MQ=255) ccccTTCTGCCAACGCGCGAACCTCATGTCGGCCCTCATGTCTGTTTATTTATACCGTCCAGCGCGCGGTAACGCAATGGGTCAGGGCCCTGCGGCGGCGTTCGCGGATGTGAAAGCGGGGCTGCCCGGGGGACCAG‑CCCCGCTTCGCGat < 2:1054229/151‑1 (MQ=255) cccTTCTGCGAACGGGCGAACCTCTTGTCGGACCTATTGTAATTTTTGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGTAAGTGAAAGCGGGGCTGCCCTCGGGAGCCG‑CCCCGCTTCGCGatt < 2:2065127/151‑1 (MQ=255) ccTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGatta > 1:7346716/1‑151 (MQ=255) cTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGattat > 1:3613348/1‑151 (MQ=255) ttCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCAGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCATCGCGattatt > 2:8572145/1‑151 (MQ=255) tCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTc > 1:7624905/1‑151 (MQ=255) ccccGACCGCGCGCACCTCCTGCCGGACCTCATGTCAGTTTAGTTATACCTTCCAGCGAGCTGTACCCCCCTCGGGCAGGGCCCTTCGGCGGCGTACGCGGAAGTGAAAGCGGGCCTCCCCCCGGCAGAAG‑CCCCGCTTCGCGATTATTca < 2:976766/148‑1 (MQ=255) cTGCGAACGCGCCACCCCCAGTTCGGACCTCTTGTCTGTGTTGTTATTCCGTCCAGCGCGCGGTAACGCCAAGGGGCTGGGCCCGGCGGCGGCGTTCGCGTAAGTGACAGCGGGGCGGCCCTGGGGAGCAG‑CCCCGCTTCGCGATTATTca < 1:5232679/151‑1 (MQ=255) cGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTTTTcagca > 1:3485221/1‑151 (MQ=255) gaccgcgcgAACCTCATGTCGGACCTCATGTCAGTTTAGTTTTACCGTCCAGCGAGCGGTAACGCAATCGGGCAGGGCCCTGCGGCGGCGTTCGCGTAAGTTAAAGCGGGGCTGCCCTCGGTAGCAG‑CCCCGCTTCGCGATTATTcagcag < 2:5531416/148‑1 (MQ=255) aCGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGa > 1:4112066/1‑151 (MQ=255) cgcgcgAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAg > 1:10879221/1‑151 (MQ=255) cgcgcgAACCTCAGGTCGGACCTCATGTCTGTGTTTTTATTCCGTCCAGCGTGCGTTAACGCCATCGGGCTGGGCCCTGCGGCGGCGTTCGCGGAAGTTAACGCGGGGCTGCCCTCGGGAGAAG‑CCCCGCTTCGCGATTATTCAGCAGGAg < 1:8198576/151‑1 (MQ=255) cgAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGcc > 2:6492277/1‑151 (MQ=255) gAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGccc < 2:4144236/151‑1 (MQ=255) aaCCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCt > 1:9111207/1‑151 (MQ=255) aTGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCcgcg > 1:5453999/1‑151 (MQ=255) cGGACCTCTTGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGc < 2:10065873/151‑1 (MQ=255) cGGACCGCATGGCTGTGTTGTTTGACCGTCCAGCTTGCGTTAACGCCTTCGGGCAGGGCCCTGCGGCGGCGTGCGGGTAAGTGATCGCGGGGCTGCGCGCGGGTGAAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTggg < 2:9310605/151‑2 (MQ=255) ggACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCg > 1:8470330/1‑151 (MQ=255) ccTCATGTCTGTTTTGTTTTTCCTGCCAGCGCGCGGTAACGCCATGGGGCTGGGCCCGGGGGCGGCGTGCGCGTATGTCAACGCGGGGCTGCCCTGGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAAc < 1:5948750/151‑1 (MQ=255) ccTCATGTCAGTTTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAAc < 2:6654949/151‑1 (MQ=255) ccTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAAc < 2:2467033/151‑1 (MQ=255) ccTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAAc > 2:9105960/1‑151 (MQ=255) ccTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAAc > 2:5938406/1‑151 (MQ=255) aTGTCAGTGTAGTTATTCCGTCCAGCGCGCGGTACCGCCAGCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAATGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTgc < 2:2709826/151‑1 (MQ=255) tGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTgcg > 1:1270918/1‑151 (MQ=255) tCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGTAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGca < 2:9877902/151‑1 (MQ=255) tCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGca > 2:9025223/1‑151 (MQ=255) gggttgTTATTCCGTCCAGCGCGGGGTAACGCCAGCGGGCCGGGCCCGGCGGCGGCGTTCGCGGAATTCAACGCGGGGGTGCCCTGGGGAGCAG‑CCCCGNTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAg < 1:5801636/146‑1 (MQ=255) tgtAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAgg > 1:4717312/1‑151 (MQ=255) tATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTg > 1:7903399/1‑151 (MQ=255) ctgcgagcgGTAACGCCATCGGGCTGGGCCCTGCGGCGGCGTTCGGGGATGTGAAAGGGGGGCGGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGcc < 1:7725321/149‑1 (MQ=255) agcgagcgGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGACCCTGCGCACAGGTCAGTGAATCACGCCg > 1:4999574/1‑151 (MQ=255) gcgagcgGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGa > 2:7822732/1‑151 (MQ=255) cgagggGTAAGGCCAAGGGGCTGGGCCCTGGGGCGGCTGTCGCGGATGTGAAAGCGGGGGTGCCGTCGTGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCTCAGGTCAGTGAATCACGCCGAc < 2:2930878/151‑1 (MQ=255) cgagcgGTAACGCCATCGGGCCGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCGGCGCGATTATTCAGCAGGAGCGCCCGTCCGCGTGGCGAACCTGCGCACAGGTCAGTGGAGAACGCCGAc > 1:9220887/1‑151 (MQ=255) agctGTACCGCCATCGGGCAGGGCCCTGCGGCGGCGGTCGCGGAAGTTACCGCGGGGCGGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGAccc < 1:2453451/151‑1 (MQ=255) agcgGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGAccc > 1:1895569/1‑151 (MQ=255) gcgGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCg > 1:6134749/1‑151 (MQ=255) gcgGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCGTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCAGCGCACAGGTCAGTGAATCACGCCGACCCg > 1:43679/1‑151 (MQ=255) cgGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCCG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCgg < 2:4037717/151‑1 (MQ=255) cgGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCGGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTAGTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCgg < 2:7961506/151‑1 (MQ=255) ggTAACGCCATGGGGCAGGGCCCTGCGGCGGCGTTCGCGGATGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCggg < 2:10220028/151‑1 (MQ=255) ggTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCggg > 1:8601386/1‑151 (MQ=255) ggTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCggg > 1:9812664/1‑151 (MQ=255) gTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGga > 1:10110095/1‑151 (MQ=255) gTAACGCCAACGGGCAGGGCCCTGCGGCGGCGTTCGCGGACGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCACCAGGCGCGCCCTTCCGCGTGGCGAACCTGCGCACCGGTCAGTGAATCACGCCGACCCGGga < 2:739604/151‑1 (MQ=255) cGCCTTCGGGCTGGGCCCTGCGGCGGCTTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAg < 1:4534285/151‑1 (MQ=255) ccATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGtt > 2:8483211/1‑151 (MQ=255) cATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTc > 1:7150857/1‑151 (MQ=255) cATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTc > 2:6409945/1‑151 (MQ=255) tCGGGCAGGGCCCTGCGGCGGCGTTCGCGTAAGTGAATGCGGGGCGGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCgg < 2:2103681/151‑1 (MQ=255) gggCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGct > 1:7853656/1‑150 (MQ=255) ctgggCCCTGCGGCGGCGTTCGCGTAAGTGACCGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGt < 1:3124519/149‑1 (MQ=255) cAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGt > 2:10682470/1‑151 (MQ=255) aGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGtt < 2:6337258/151‑1 (MQ=255) aGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGtt < 2:3472426/151‑1 (MQ=255) gggCCCAGCGGCTGCGTTCGCGGACGTGAAAGCGGGGCTGCCATCGGGAGCA‑CCCCCGCTTCGCGATTATTCAGCAGGATCGCCCTTCCGCTTGGCGAACCTGCGCACAGGTCAGTGATTCACGCCGACCCGGGAGATTTTCGGCAGGTTg < 2:4896903/151‑1 (MQ=255) cccTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTc < 2:9529022/151‑1 (MQ=255) ccTGCGGCGGCGTTCGCGGATGTGAAAGGGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCtaa < 1:1442720/151‑3 (MQ=255) ccTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCa > 2:3304562/1‑151 (MQ=255) cTGGGGGGGCTTGCGGGGAAGTGAAAGCGGGGCGGCCGTCGGGTGCTG‑CCCCGCTTCGCGATTATTCAGCAGGTGCGCCCTTCCGCGTGGCGAACCGGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCAt < 1:3853606/151‑1 (MQ=255) cTGGGGCGGCGTTCGCGGAAGTGAACGCGGGGCGGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCAt < 1:10496924/151‑1 (MQ=255) gcggcggcgTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCt > 1:6415100/1‑151 (MQ=255) cggcggcgTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCtt > 2:7136629/1‑151 (MQ=255) ggcggcgTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTc < 2:6880814/151‑1 (MQ=255) gcggcgTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGACGTTCGGCAGGGTGCTCATCTTCg > 2:10899086/1‑151 (MQ=255) gcggcgTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCg > 2:8083612/1‑151 (MQ=255) cggcgTTCGCGGAAGTGAACGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCgg < 2:10735880/151‑1 (MQ=255) cgTGCGCGGAAGTGAACGCGGGGCTGCCCGGGGGAGC‑CCCCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATc < 1:1842876/151‑1 (MQ=255) gTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCg < 2:376283/151‑1 (MQ=255) ttCGCGTAAGTTAAAGCGGGGCGGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCgg < 1:4228780/151‑1 (MQ=255) ttCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGACTCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCgg > 2:1377501/1‑151 (MQ=255) cgcgGAAGTGAAAGCGGGGCGGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGc < 2:10803112/151‑1 (MQ=255) gcgGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGcc > 1:8819914/1‑151 (MQ=255) gcgGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGcc < 2:3855408/151‑1 (MQ=255) gAAGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGc < 2:144197/151‑1 (MQ=255) aGTGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTc < 2:4210893/151‑1 (MQ=255) tGAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCAt > 2:163145/1‑151 (MQ=255) gAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGACCCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATc > 2:2941426/1‑151 (MQ=255) gAAAGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATc > 2:5983939/1‑151 (MQ=255) acaGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTAGTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTTCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATcc < 1:5111630/149‑1 (MQ=255) aaaGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATcc < 2:8176639/151‑1 (MQ=255) aaGCGGGGCTGCCCTCGGGAGCAG‑CCCCGCGTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCca > 2:1247160/1‑151 (MQ=255) aGCGAGGCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCcac < 2:6970809/151‑1 (MQ=255) ggggCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACg > 2:4537349/1‑151 (MQ=255) ggggCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACg < 1:9153470/151‑1 (MQ=255) gCTGCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCg < 1:2732229/151‑1 (MQ=255) gCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAg < 1:2115421/151‑1 (MQ=255) gCCCTCGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAg < 2:5118035/151‑1 (MQ=255) gcGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCt < 2:5680153/150‑1 (MQ=255) cGGTAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCtt < 1:264810/151‑1 (MQ=255) cGGGAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCtt > 2:5306549/1‑151 (MQ=255) ggAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCTTGc > 1:11026795/1‑151 (MQ=255) gAGCAG‑CCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCTTGcc < 1:7136629/151‑1 (MQ=255) agcag‑cCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCTTGCcg < 2:6729983/151‑1 (MQ=255) | CCAGCAGGGACATCCCCTTCTGCGAACGCGCGAACCTCATGTCGGACCTCATGTCAGTGTAGTTATTCCGTCCAGCGAGCGGTAACGCCATCGGGCAGGGCCCTGCGGCGGCGTTCGCGGAAGTGAAAGCGGGGCTGCCCTCGGGAGCAGCCCCCGCTTCGCGATTATTCAGCAGGAGCGCCCTTCCGCGTGGCGAACCTGCGCACAGGTCAGTGAATCACGCCGACCCGGGAGAAGTTCGGCAGGTTGCTCATCTTCGGATCGGGCCAGCTCATCCACACGGCGAAGGCCTTGCCG > NC_008463/4819563‑4819859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |