| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,395,470 | Δ1 bp | intergenic (‑103/+50) | PA14_RS24730 ← / ← PA14_RS24735 | hypothetical protein/ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,395,467 | 0 | G | . | 96.0% | 1706.8 / 90.2 | 422 | intergenic (‑100/+53) | PA14_RS24730/PA14_RS24735 | hypothetical protein/ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (1/10); major base . (203/178); minor base T (0/16); total (204/218) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.61e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 445 total aligned reads displayed.
TCGCGTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGGCGGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAGT > NC_008463/5395317‑5395613 | cgcgTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgg < 2:4010247/151‑1 (MQ=255) gcgTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTCTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAggg < 2:526403/151‑1 (MQ=255) cgTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggc > 1:3180290/1‑150 (MQ=255) tCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGCggggc > 2:5152068/1‑150 (MQ=255) cAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGCggggct > 1:6693878/1‑149 (MQ=255) cAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGCggggct > 2:6818181/1‑149 (MQ=255) ccccAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTc < 1:7795643/151‑1 (MQ=255) cccAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTcc < 2:5456384/151‑1 (MQ=255) cccAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCAAGGGGGTTCCCAGTTTTGAGCCAACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGTCTGAAACGCACGA‑GGGC‑GGGGCTTTcc > 2:8013569/1‑151 (MQ=255) ccAGACACGGGCGGATGAGGCAGAGGTTTCGCGTCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGCGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCa < 2:8594777/151‑1 (MQ=255) ccAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCa < 1:10698646/151‑1 (MQ=255) cAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGACCTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAg > 2:10877658/1‑151 (MQ=255) aCAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGccc < 2:2978405/151‑1 (MQ=255) cAAGGGCGGATGAGGCAGTGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGcccc > 2:5625339/1‑151 (MQ=255) ggCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGccc > 2:2517513/1‑151 (MQ=255) ggCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGccc < 2:10793247/151‑1 (MQ=255) cGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTc > 2:5898473/1‑151 (MQ=255) ggATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCg < 1:8330389/151‑1 (MQ=255) ggATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCAGAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTGTCCAGCCCCGCCCTCg > 2:5551241/1‑151 (MQ=255) gATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCgg < 1:2241686/151‑1 (MQ=255) tGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCa > 2:3351049/1‑151 (MQ=255) gAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAg > 2:10335898/1‑151 (MQ=255) ggCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGt > 1:6404241/1‑151 (MQ=255) agagGTAACGCGGCTTGGCGGCTTCCTCACGGGGGTTCCCTGTTTTGCGCCTACACCTGCCGCCAGGTTCCGCATCGCGCCGGCGGTAACTTGACCACCGGGCTTAAACGCACG‑TGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTcc < 2:1851439/151‑1 (MQ=255) gcggTTACGCGGCATGGCGGCATCCTCCCGGGGGTGCCCAGTTTTGAGCCTACCCCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCg < 2:6604535/149‑1 (MQ=255) tccgcgGCATGGCGGCACCCCCACGGGGGTTCCATGTTTTGAGCCAACACCTGCCGCCAGTTCCCGAAAAGCGCCGGCGGGAACTTGACCACAGGGCTGAAACGCAC‑TCGGGC‑GGGGCTTTCCCCCCCCGCCCTCGGCAGGTTCCGGCAAc < 1:3555103/149‑1 (MQ=255) aCGCGGCAGGGCGGCATCCTCACGGGGGTTCCCAGATTGGCCCCTACACCTGCCCCCAGGTTCCGCATAGCGCCGCCGGGAACTCGGCCACCGGCCTGCAACGCCCGA‑‑GGCCGGGGCATTCCAGCCCCGCCCTCGGCAGGTTCCGGCAAct < 2:7875582/151‑2 (MQ=255) ggCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGcc > 1:3993363/1‑151 (MQ=255) ggCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGcc > 1:8217454/1‑151 (MQ=255) cATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCgg > 1:5995644/1‑151 (MQ=255) gcATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACTGGGCTGAAACGCACG‑CGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGt < 1:2489525/151‑1 (MQ=255) cATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTc > 1:9071776/1‑151 (MQ=255) acccTCCCGGGGGTGCCAAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAACCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTcc < 2:9393606/149‑1 (MQ=255) aTCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTcc > 1:8054027/1‑151 (MQ=255) aTCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTcc > 1:4376815/1‑151 (MQ=255) tCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttct < 2:7151577/151‑1 (MQ=255) tCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttct > 1:10444511/1‑151 (MQ=255) tCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttcg > 1:1137465/1‑150 (MQ=255) acACGGGGGTACCAAGTTTTGAGCCTACACCTGCCGCCTGGTACCGCATCGCGCCGGGGGTAACTTGCCCCCCGGGCTGAAACGC‑CG‑GTGGGGGGGGCTTCCCCGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttct < 1:2877320/150‑1 (MQ=255) cACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAACCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttctt < 2:9501526/151‑1 (MQ=255) cACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttctt > 2:2847277/1‑151 (MQ=255) cACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttctt > 1:1946/1‑151 (MQ=255) cACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttctt > 1:9425289/1‑151 (MQ=255) gggggTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgc > 1:1353621/1‑151 (MQ=255) gggggTTCCCAGTTATGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgc > 2:4894283/1‑151 (MQ=255) ggggTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGATCCGGCAACGCGCCGGACTCAGTCCTTCTTcgcc > 2:6230860/1‑151 (MQ=255) gggTTCCCCGTTTTGTGCCAACACCTGCCGCCAGGTTCCGAATCGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCTGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgccg < 2:3003204/151‑1 (MQ=255) ggTTCCCAGTTTTGAGCCTACCCCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGACCACAGGGCTGAAACGCACG‑TGGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgccgc < 1:1493790/151‑1 (MQ=255) gTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCcgcg > 2:10642280/1‑151 (MQ=255) gTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCcgcg < 2:8886180/151‑1 (MQ=255) ttCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCgg > 1:7603639/1‑151 (MQ=255) aGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTg > 2:8075462/1‑151 (MQ=255) aGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTg > 1:6785253/1‑151 (MQ=255) tttttGAGCCTACCCCAGCCGCCTGGTTCCGCATAGCGCCGGCGGGAAATTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGt < 1:1592832/150‑1 (MQ=255) gTTTTGCGCCTACACCTGCCGCCAGGTACCGCATAGCGCCGGCGGTAAGTTGTCCACCGGGCTTAAACGCACGTGGG‑‑GGGGGATTTCCACCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGt < 1:6508063/151‑1 (MQ=255) tGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCtt < 2:1231363/151‑1 (MQ=255) gAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTc > 1:3272784/1‑151 (MQ=255) cgCCTCCACCTGCCGCCAGGTTCCGCATCGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGATTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcg < 1:638393/150‑1 (MQ=255) aGCCTCCCCCGGCCGCCAGGTCCCGAAACGCGCCGGCGGTAACTTGTCCACAGGGCTCAAACGCACGTGGG‑‑GGGGGCTTGCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcg < 1:3743082/151‑1 (MQ=255) ccTCCACCTGCCGCCTGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCCCG‑CGGGC‑GGGGCTTCCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgcc < 1:4659262/151‑1 (MQ=255) tACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgccgc > 2:10389856/1‑151 (MQ=255) ccacCTCCCGCCAGGTACCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTTAACCGCACG‑TGGGC‑GGGGCTTACCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCcgcg < 1:9234760/150‑1 (MQ=255) cccTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTTTCCACTGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGAc < 1:5104476/150‑1 (MQ=255) acCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGACACGCCCGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGAc < 2:1521397/151‑1 (MQ=255) ccTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACg > 1:5790112/1‑151 (MQ=255) cTGCCGCCAGGTTCCGCATAGCGCCGGCGGGACCTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCCACGCGCCGGACTCCGTCCGTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACgg > 2:7338667/1‑151 (MQ=255) tGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGt < 2:3430113/151‑1 (MQ=255) ccgccAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGtct < 2:2669988/151‑1 (MQ=255) cctggTTCCGCATCGCGCCGGCGGGAACTTGACCACAGGGCTGAACCGCACG‑TGGGC‑GGGGCTTACCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCtt < 1:10240928/148‑1 (MQ=255) cAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCttt > 1:2319364/1‑151 (MQ=255) ggTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTtct < 1:852077/151‑1 (MQ=255) ggTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGGCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTtct > 1:3655971/1‑151 (MQ=255) cgTTCCGCATCGCCCCGGCGGTAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCAAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTtct < 1:10911523/150‑1 (MQ=255) ttCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTcc < 2:9775036/151‑1 (MQ=255) ccGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgc > 2:1459428/1‑151 (MQ=255) ccGCAGAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgc < 2:499471/151‑1 (MQ=255) gCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgccg > 1:8662899/1‑151 (MQ=255) cATAGCGCCGGCGGGAACTTGTCCACTGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCgg < 2:9438473/151‑1 (MQ=255) cATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGGCCTTCGCCGCGACGGTCTCTTTCTCCGCCgg > 2:8713069/1‑151 (MQ=255) gcgcCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTg > 2:60600/1‑151 (MQ=255) gcgcCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTGCGCCGCGACGGTCTCTTTCTCCGCCGGCTTg > 2:3675112/1‑151 (MQ=255) ccGGCGGGACGTTGTCCACAGGGCTGTAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCGTTCGCCGCGACGGTCTCTGTCTCCGCCGGCGTGTcc > 2:1322918/1‑151 (MQ=255) ccGGCGGGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTGCGCCGCGACGGTCTCTTTCTCCGCCGGCGTGTcc > 2:10136496/1‑151 (MQ=255) cggcggGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCt > 2:3804535/1‑151 (MQ=255) cggGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCtttt > 1:10053971/1‑151 (MQ=255) cggGAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCtttt > 2:9122253/1‑151 (MQ=255) gggAACTTGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTc > 1:9810107/1‑151 (MQ=255) ttGTCCACAGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtc < 2:7720404/151‑1 (MQ=255) gTCCACTGGGCTGAAACGAACGA‑GGGCGGGGG‑TTTCCTGCCCCGCCCTCGGCTGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTGGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtcgt < 2:8322146/151‑1 (MQ=255) aGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCCGGGTCCGGCAACGCGCCGGTCTCAGTGCTTCGTCGCCGCGGCCTTGTCCTTCGCCGCGCCGGTCGCTTTCTCCGCCGGCTTGTCGTTTTCCTTGTCGTCctggt > 1:9650000/1‑148 (MQ=255) aGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCtt < 2:4072500/151‑1 (MQ=255) aGGGCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCGTTTCCTTGTCGTCCTCtt > 1:3846315/1‑151 (MQ=255) gggCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTACTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTc > 2:4671685/1‑151 (MQ=255) gCTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCa < 2:7557541/151‑1 (MQ=255) cTGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCAt < 2:6720518/151‑1 (MQ=255) tGAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATg > 1:619326/1‑151 (MQ=255) gAAACGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGc > 2:2159760/1‑151 (MQ=255) aaaCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGcc > 1:3390111/1‑151 (MQ=255) aaCGCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCg < 2:9665363/151‑1 (MQ=255) gCACGA‑GGGC‑GGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAGt < 1:7318176/151‑1 (MQ=255) | TCGCGTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGGCGGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAGT > NC_008463/5395317‑5395613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |