New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_008463	= 729041	527 (1.040)	30 (0.060)	22/300	29.8	5.3%	coding (676/1092 nt)	PA14_RS03435	anhydro‑N‑acetylmuramic acid kinase
	?	NC_008463	729055 =	536 (1.060)					coding (662/1092 nt)	PA14_RS03435	anhydro‑N‑acetylmuramic acid kinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCGCTCAGCTCCAGCAGGGTTGCCTGGATATCCGCTGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_008463/728908‑729041 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGCGTCCATCAGCACGTTGCCCGGGCCGCAGTCGAAGCCGCGTACCGGCTTTCCGGG  >  NC_008463/729055‑729197                                                                                                                                                                                                                                                                                       GCGCTCAGCTCCAGCAGGGTTGCCTGGATATCCGCTGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTG                                                                                                                                <  2:5802103/151‑1  CGCTCAGCTCCAGCAGGGTTGCCTGGATATCCGCTGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTTGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGG                                                                                                                               >  1:4568351/1‑151         CTCCAGCAGGGTTGCCTGGATATCCGCTGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCT                                                                                                                        <  1:2251566/151‑1         CTCCAGCAGGGTTGCCTGGATATCCGCTGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCT                                                                                                                        <  1:2251726/151‑1         CTCCAGCAGGGTTGCCTGGATATCCGCTGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCT                                                                                                                        <  1:2251727/151‑1                         TGGATATCCGCTGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCA                                                                                                        >  2:7526923/1‑151                         TGGATATCCGCTGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCA                                                                                                        >  2:7526917/1‑151                           GATATCCGCTGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACG                                                                                                      <  1:3391273/151‑1                                  GCTGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTC                                                                                               <  2:10690828/151‑1                                    TGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCC                                                                                             <  2:10287993/151‑1                                    TGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCC                                                                                             <  2:4702080/151‑1                                        GGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTGGAAGCGCTCGCGCCCGGTGCTCTGGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTC                                                                                         >  1:3237008/1‑151                                                 GGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTC                                                                                <  1:679856/151‑1                                                    TGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCC                                                                             >  2:6925271/1‑151                                                     GACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCG                                                                            <  1:951007/151‑1                                                                TGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATG                                                                 <  2:4980937/151‑1                                                                TGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGGTCATCTGGCCGCTGGCGGCCCACGCACCGTCACGGTCGAAATGTTCGCCGCGTTGGTGATG                                                                 <  2:4980477/151‑1                                                                       GCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAG                                                          <  1:10600996/151‑1                                                                       GCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAG                                                          <  1:10592202/151‑1                                                                         AGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGC                                                        >  1:6765726/1‑151                                                                         AGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGC                                                        >  1:6765594/1‑151                                                                         AGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGC                                                        >  2:8491905/1‑151                                                                                ACAGGTTGAAGCGCTCGCGCCCGGTGATCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGAGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGCGACCATC                                                 >  2:2225102/1‑151                                                                                        AAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGCGTCCATCAGCACGTT                                         >  1:1178309/1‑151                                                                                           CGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGCGTCCATCAGCACGTTGCC                                      <  2:4798351/151‑1                                                                                                 CGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGCGTCCATCAGCACGTTGCCCGGGCC                                <  2:3828887/151‑1                                                                                                      GGTGCTCTTGGGGCCACGCGCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGCGTCCATCAGCACGTTGCCCGGGCCGCAGT                           >  1:8748408/1‑151                                                                                                                         GCGGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTGGGTGATGAATCCAGGCGTCCATCAGCACGTTGCCCGGGCCGCAGTCGAAGCCGCGTACCGGCTT        <  2:6262725/151‑1                                                                                                                           GGCGAAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGCGTCCATCAGCACGTTGCCCGGGCCGCAGTCGAAGCCGCGTACCGGCTTTC      >  2:10401770/1‑151                                                                                                                               AAGAACTCCTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGCGTCCATCAGCACGTTGCCCGGGCCGCAGTCGAAGCCGCGTACCGGCTTTCCGGG  <  1:9557505/151‑1                                                                                                                                                                                                                                                                                       GCGCTCAGCTCCAGCAGGGTTGCCTGGATATCCGCTGCCGGCAAGGCAGGGTGACGAGCCAGGTGCTCCTGCAGCCAGGACAGGTTGAAGCGCTCGCGCCCGGTGCTCTTGGGGCCACGCGCGGCGAAGAACTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_008463/728908‑729041 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTGCCAGCAGTGCGTGGTTCATCTGGCCGCTGGCGGCCCACGCACCGTCCCGGTCGAAATGTTCGCCGCGTTGGTGATGAATCCAGGCGTCCATCAGCACGTTGCCCGGGCCGCAGTCGAAGCCGCGTACCGGCTTTCCGGG  >  NC_008463/729055‑729197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.