Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 3,515,863 T→C intergenic (+617/+267) PA14_RS16005 → / ← PA14_RS16010 AAA family ATPase/DUF4354 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084633,515,8630TC99.0% 1091.7 / NA 295intergenic (+617/+267)PA14_RS16005/PA14_RS16010AAA family ATPase/DUF4354 family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (122/170);  minor base A (2/1);  total (124/171)
Fisher's exact test for biased strand distribution p-value = 5.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 295 total aligned reads displayed.

GTATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAA  >  NC_008463/3515715‑3516010
                                                                                                                                                     |                                                                                                                                                    
gTATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTc                                                                                                                                                    <  2:3020092/151‑1 (MQ=255)
  ataCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAc                                                                                                                                                  <  1:10090204/151‑1 (MQ=255)
   taCAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCAcc                                                                                                                                                 <  1:8691698/151‑1 (MQ=255)
       gCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCaa                                                                                                                                             <  2:10176176/151‑1 (MQ=255)
        ccccTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAc                                                                                                                                            <  2:7199209/151‑1 (MQ=255)
         ccctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTcaacccaacc                                                                                                                                           >  2:11040633/1‑151 (MQ=255)
         ccctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAcc                                                                                                                                           <  1:8334521/151‑1 (MQ=255)
           ctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCct                                                                                                                                         <  1:9684604/151‑1 (MQ=255)
           ctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCct                                                                                                                                         <  1:822289/151‑1 (MQ=255)
           ctccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACAcccccaacca                                                                                                                                         >  1:5226886/1‑145 (MQ=255)
            tccctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCctc                                                                                                                                        <  1:688198/151‑1 (MQ=255)
               ctAAGCCATAGCCCTTCCCCATTCCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGTATGTGGTGTTGGCCCTCACCCCAAcccaatcc                                                                                                                                     >  1:8960974/1‑146 (MQ=255)
               ctAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTcc                                                                                                                                     <  1:5660188/151‑1 (MQ=255)
               ctAACCCATCGCCCTTCCCCATACCTGAACGGCACACCTCTTGCCACCCGCAAAACCCCACCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTcc                                                                                                                                     <  1:4135730/151‑1 (MQ=255)
                 ccgCCAGAGCCCTTCCCCCTACCTGAACGGCACACCGAGTGCCACCCGCAAAACCACCACCTCCCCCGCGGCGCACCGCAATAGCTGCGGCATGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCACAACCCTCTCCCg                                                                                                                                   <  2:4195385/149‑1 (MQ=255)
                 aaGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTTGGCCACACCCCAAcccacaaccc                                                                                                                                   >  1:10507747/1‑144 (MQ=255)
                 aaGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCg                                                                                                                                   >  2:4948104/1‑151 (MQ=255)
                 aaGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAAcccacaaccg                                                                                                                                   >  2:4245448/1‑144 (MQ=255)
                  aGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAAACctatacccc                                                                                                                                  >  2:3229682/1‑144 (MQ=255)
                    ccATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCTCACCCCAAACCACACCCGCAc                                                                                                                                >  1:6105899/1‑151 (MQ=255)
                     cATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCAcg                                                                                                                               <  2:3513477/151‑1 (MQ=255)
                       tAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCAcgcg                                                                                                                             <  1:11108456/151‑1 (MQ=255)
                         gCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCggg                                                                                                                           <  1:1464533/151‑1 (MQ=255)
                           ccTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACGACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGgag                                                                                                                         <  2:8950544/151‑1 (MQ=255)
                             ttCCCCATACCTGAACGGCACACCAATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAAACCTCTCCCGCACCCGGGagag                                                                                                                      >  1:2382792/1‑151 (MQ=255)
                                cccATACCTGAACGGCACACCTTTTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGGGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCAGCCCAACCCGCACCCCCCCGCGGGAGAgggg                                                                                                                   >  1:1364160/1‑151 (MQ=255)
                                    tACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAACCCACTACCCCACGCGGGAGGGGGGGGCg                                                                                                               >  1:10263795/1‑151 (MQ=255)
                                               cacaCCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAAGAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTtg                                                                                                    <  2:8351043/151‑1 (MQ=255)
                                                 cacCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAAGGTGGTGTTGGCCCTCACCCCCACCCTCTCCCGCAAGCGGGTGAGGGGGCCGGGCGTGCCTtgtg                                                                                                  <  2:3426914/151‑1 (MQ=255)
                                                  acCTATTGCCACCCGCAAAACCCCCACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCCCCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTgg                                                                                                 <  1:6640822/151‑1 (MQ=255)
                                                     tATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTc                                                                                              <  1:197568/151‑1 (MQ=255)
                                                      agggCCACCCGCAAACCCACCACCTCCCCCGCTGCTACCCGCCAGAGCAGCGGCGTGAGTGTCGCGGATCGGTTGTTGGAAGGTGGTGTTGGCCCGCACCCCCACCCTCGCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTGGTGGGTCg                                                                                             <  2:7072407/148‑1 (MQ=255)
                                                      aTTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGCTCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCAACCCACACCCGCACGCGGGAGAGGGGGCCGGGCGTGGCGTGGGGGtgg                                                                                             >  2:2199395/1‑149 (MQ=255)
                                                       tggCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAAGAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGa                                                                                            <  2:4482922/149‑1 (MQ=255)
                                                        tGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAAACCTCACCCGCCCGCGGGGGAGGGGGGCGGGGGGGCCGTGTGGGtggtg                                                                                           >  1:10459009/1‑147 (MQ=255)
                                                          ccACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACACCAACCCGGTCCCGCCCGCGGGCGGGGGGGGCGGGCGTGGCGTGgggggggaggg                                                                                         >  2:9573970/1‑144 (MQ=255)
                                                           cACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCCCCCCCGGGAGAGGGGGGCGGGCGTGCCAGGTGGGGCGAgcgc                                                                                        >  2:5200210/1‑151 (MQ=255)
                                                           cACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAgcgc                                                                                        <  1:1874499/151‑1 (MQ=255)
                                                              ccGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctc                                                                                     <  1:680356/151‑1 (MQ=255)
                                                               cGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCATCACCCCCAACCACTCCCGCACGCGGGTGAGGGGGCCGGGGGGGCCAGGTGGGTCGCGCGCcgcg                                                                                    >  1:4929915/1‑151 (MQ=255)
                                                               cGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcg                                                                                    <  2:2355234/151‑1 (MQ=255)
                                                                  aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCcccgctc                                                                                 <  1:9168241/151‑1 (MQ=255)
                                                                  aaaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACCCCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctc                                                                                 <  1:3267991/151‑1 (MQ=255)
                                                                   aaaCCACAACCTCCCCCGCTGCTACCCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctcg                                                                                <  1:9123811/151‑1 (MQ=255)
                                                                   aaaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCctcgctcg                                                                                <  1:3974493/151‑1 (MQ=255)
                                                                    aaCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCgg                                                                               <  2:7277140/151‑1 (MQ=255)
                                                                     aCCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCggg                                                                              <  2:7139084/151‑1 (MQ=255)
                                                                       cacaCCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGgcg                                                                            <  1:7064450/151‑1 (MQ=255)
                                                                       cacaACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGgcg                                                                            <  2:1940725/151‑1 (MQ=255)
                                                                           aCCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACCACCCCAACCACAACCCCACCCGGGTGGGGGGGGCGGGGGTGGGGTTTGGGTAGTGCGCCGCGCGCGGGGGCAGc                                                                        >  1:4470167/1‑151 (MQ=255)
                                                                            ccTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCCACCCACTCCCCCCCCCGGGAGAGGGGGGCGGGGGTGGCGGGTGGGGGGGGCGCCGCGCGCGGGCgccgcc                                                                       >  2:7334058/1‑151 (MQ=255)
                                                                             cTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCAAACCCCAACCCACTCCCCCCCGCGGGGGGGGGGGGCGGGCGGGCCTTGTGGGGGGAGCGCCTCGCGCGGGCGCAggcg                                                                      >  2:92091/1‑148 (MQ=255)
                                                                             cTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCt                                                                      <  1:7956115/151‑1 (MQ=255)
                                                                               cccccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGATTGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTgg                                                                    <  2:7576179/151‑1 (MQ=255)
                                                                                 cccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCCACCCACACCCCCACGCGGGCGCGGGGGGCCGGGGGGGCCTGTGGGTCGCGCGCCGCGCGCGGGCGCCGCCCggga                                                                  >  1:6515811/1‑149 (MQ=255)
                                                                                  ccGCTGCTAACCGCCATCGCTGCGGCTTGAGTGTCGCGGATCGGTTTTGGGAATGGGGTGTTGGCCCTCACCCCAACCCTCGCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAAc                                                                 <  2:7421462/151‑1 (MQ=255)
                                                                                  ccGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAAc                                                                 <  2:7745202/151‑1 (MQ=255)
                                                                                   cGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACg                                                                <  1:6264196/151‑1 (MQ=255)
                                                                                      tgctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCACCCCCACCCACGGCCCCCCCCCGGGGGGGGGGCCGGGGGGGGGGTGTGGGGGGGGCGCCCCGCGCGGGCGCCGCCGGGGCCGATg                                                             >  1:5841676/1‑151 (MQ=255)
                                                                                       gctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCACACCCCCACCCACTCCCGCACGCGGGGGAGGGGGGCGGGCGTGCCGTGTGGGGCGAGCGCCGCGCACGGGCGCAGCCTGGCACGAAGt                                                            >  2:5766120/1‑151 (MQ=255)
                                                                                       gctAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCCCACCCCAACCCACACCCGCCCCCCGGGGAGGGGGGCGGGCGGGCCGTGTGGGGCGAGCGCCACCCGCGGGCGCACCCGGGGACGaatt                                                            >  2:6326893/1‑148 (MQ=255)
                                                                                         tAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCCCGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCt                                                          <  1:3007923/151‑1 (MQ=255)
                                                                                         tAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAACCCACAACCCCACCCGGGGGAGGGGGCCGGGCGTGGCGTGTGGGTCGTGCGCCACGCTCGGGCGCAGCCGGGAACGATGtat                                                          >  2:253379/1‑149 (MQ=255)
                                                                                          aaCCGAAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTa                                                         <  2:3732294/151‑1 (MQ=255)
                                                                                            ccGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACCCCCCAACCCTCTCCCGCCCGCGGGCGAGGGGGCCGGGCGGTCCTGGTGGGTCCGGCGCCGCGCGCGGGCGCAGCCGGGACCGCTGTGTAcc                                                       >  2:6961473/1‑151 (MQ=255)
                                                                                              gCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCt                                                     <  2:474875/151‑1 (MQ=255)
                                                                                              gCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAAACCACACACGCCCGCGGGGGAGGGGGCCGGGCGTGCCTTGTGGGTGGAGCGCCACGCGAGGGCCCAGCCAGGTAAGATGTGAAccca                                                     >  2:1039909/1‑150 (MQ=255)
                                                                                               cAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGCACCCCAAACCTCGACCGCACGCGGGGGAGGGGGGCGGGCGTGGCGTGGGGGTCGCGCGCCTCGCTCGGGCGCAGCCGGGTACGCTGTGTAACCTc                                                    >  2:10832148/1‑151 (MQ=255)
                                                                                                aaTAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTcc                                                   <  2:810594/151‑1 (MQ=255)
                                                                                                 aTAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCCCACCCCCACCCACACCCGCACGCGGGAGTGGGGGCCGGGCGGGGCTTGTGGGGCGAGCGCCACGCTCGGGGGCAGGCGGGGACGATGTGGAACCTccc                                                  >  2:1412535/1‑151 (MQ=255)
                                                                                                    gCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAAACCACACCCGCCCCCGGGCGAGGGGGGCCGGCGGGCCAGGTGGGTCGAGCGCCGCGCGAGGGCGCAGCCGGGAACGATTTATAACCAccccga                                               >  2:8587681/1‑149 (MQ=255)
                                                                                                     cTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAg                                              <  1:7288239/151‑1 (MQ=255)
                                                                                                     cTGCGCCTTGAGTGTCGCGGATCGGATTTAGGAATGTCGTGTTGGCCCACACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGAGGTCTACCCTCCCCTAg                                              <  2:6685337/151‑1 (MQ=255)
                                                                                                       gCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGc                                            <  2:2627712/151‑1 (MQ=255)
                                                                                                       gCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGc                                            <  1:11011768/151‑1 (MQ=255)
                                                                                                          gCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCGAACCCCCACCCACACCCCCACGCGGGTGGGGGGGCCCGGGGTGGCCGGTGGGTGGTGCCCCCCCCGCGGGGCCCGCCGTGGTCGATGTCTAACCACCCCAAGGcccc                                         >  1:10013410/1‑151 (MQ=255)
                                                                                                          gCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCACAACCCAACCCGCTCCCGCCCGCGGGGGAGGGGGGCGGGCGTGGCGTGGGGGTCGAGCGCCGCGCTCGGGCGCGGCCTGGTCCGATGTCTACCCTCCCCTGGGgccc                                         >  2:9759734/1‑151 (MQ=255)
                                                                                                           cTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCg                                        <  1:10715603/151‑1 (MQ=255)
                                                                                                            ttGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCgg                                       <  1:2672548/151‑1 (MQ=255)
                                                                                                            ttGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCgg                                       <  1:3053502/151‑1 (MQ=255)
                                                                                                               aGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCAAAACCCAACCCAAAACCCCCCGCCGGGGAGGGGGGCGGGGGGGCCGTGTTGGTGGTGCGCCGAGCACGGGGGCCGCCGGGAACGATGTCTAACCACCCCGATGCCCCcggga                                    >  2:4853794/1‑149 (MQ=255)
                                                                                                               aGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGGCCAAAAACCAACCCTCTCCCGCACGCGGGTGTGGGGGGCGGGCGTGGCGTGTTGGTCGCGCGCCGCGCTCGGGCGCAGGCGGGAACGCTGTCTACCCGCCCCTGGGGCCCgggga                                    >  2:2449182/1‑149 (MQ=255)
                                                                                                                gtgtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTAt                                   <  1:4553464/151‑1 (MQ=255)
                                                                                                                  gtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCCCCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCt                                 <  1:7405665/151‑1 (MQ=255)
                                                                                                                  gtCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAAACCGCTCCCGCACCCGGGAGTGGGGGGCGGGCGGGCCATGTGGGTAGAGGGCCACGCGCGGGCGCACGCGGGATAGATGTGTACCCTCCCCGAGGGCCCGGGGATCt                                 >  2:6385311/1‑151 (MQ=255)
                                                                                                                   tCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTg                                <  1:5378701/151‑1 (MQ=255)
                                                                                                                    cgcgGATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTgg                               <  1:4272242/151‑1 (MQ=255)
                                                                                                                      cgGATCGGTTTTTGGAATGTGGTGTTGGCCCACACCCCAACCCTCACCCGCCCGCGGGAGAGGGGGGCCGGCGTGCCGGGTGGGTCGAGCGCCGAGCGCGGGCGCCGCCGGGGACGATGTGTAACCACCCCCAGGCCCCGGGGATCAggga                             >  2:6088102/1‑149 (MQ=255)
                                                                                                                       ggATCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAAt                            <  1:10331317/151‑1 (MQ=255)
                                                                                                                       ggATCGGTTTTTGGAATGTGGTGTTGGCCCGCACCCCAAACCTCAACCCCACGCGGGAGAGGGGGCCGGGCGTGCCGTGTGGGTCGGGCGCCTCGCTCGGGCGCCGCCGGGAACGATGTCTAGCCTACCCGAGGCCCCGGGTATCTGGAAt                            >  2:10573140/1‑151 (MQ=255)
                                                                                                                          tCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCg                         <  1:2796093/151‑1 (MQ=255)
                                                                                                                          tCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCg                         <  1:9888578/151‑1 (MQ=255)
                                                                                                                          tCGGTTTTTGGAATGTGGTGTTGGCCCTCACCCCAACCCAAGCCCCCACCCGGGTGAGGGGGGCGGGCGGGCCGTGTGGGTGGAGCGCCGCGCGCGGGCGCCGCCAGGCACGCTGTCTACCCACCCCCAGGCCCCGGGGATCAGGGATTCg                         >  2:5534977/1‑151 (MQ=255)
                                                                                                                                 ttGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTCGGCCCCGGGTATCTGGAATTCGGCCccca                  <  1:2171017/151‑1 (MQ=255)
                                                                                                                                  tGGAATGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccag                 <  2:3875738/151‑1 (MQ=255)
                                                                                                                                  tGGAATGTGGTGTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGTGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccag                 <  1:10386174/151‑1 (MQ=255)
                                                                                                                                     aaTGTGGTGTTGGCCCTCACCCCACCCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCcccagccc              <  2:8854462/151‑1 (MQ=255)
                                                                                                                                         tggtgTTGGCCCTCACCCCCACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGc          <  1:2238947/151‑1 (MQ=255)
                                                                                                                                          ggtgTTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCa         <  1:10959981/151‑1 (MQ=255)
                                                                                                                                            tgtTGGCCCTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAAc       >  1:9782035/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GTATACAGCCCCTCCCTAAGCCATAGCCCTTCCCCATACCTGAACGGCACACCTATTGCCACCCGCAAAACCACAACCTCCCCCGCTGCTAACCGCAATAGCTGCGGCTTGAGTGTCGCGGATCGGTTTTTGGAATGTGGTGTTGGCCTTCACCCCAACCCTCTCCCGCACGCGGGAGAGGGGGCCGGGCGTGCCTTGTGGGTCGAGCGCCTCGCTCGGGCGCAGCCTGGAACGATGTCTACCCTCCCCTAGGCCCCGGGTATCTGGAATTCGGCCCCCAGCCCAGGCAACCAAAA  >  NC_008463/3515715‑3516010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: