Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_008463 | 2,787,873 | A→C | pseudogene (951/3090 nt) | PA14_RS13085 → | CusA/CzcA family heavy metal efflux RND transporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 2,787,873 | 0 | A | C | 99.7% | 1292.1 / ‑4.3 | 338 | pseudogene (951/3090 nt) | PA14_RS13085 | CusA/CzcA family heavy metal efflux RND transporter |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (154/182); minor base G (0/1); total (154/184) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 |
Only 100 of 338 total aligned reads displayed.
TCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCT > NC_008463/2787740‑2788003 | tCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaa > 1:8210883/1‑151 (MQ=255) cATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaag < 1:1631331/151‑1 (MQ=255) aTGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaaga < 2:4358545/151‑1 (MQ=255) tGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTgaagaagaa < 1:2570417/151‑1 (MQ=255) gCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAc > 1:2092920/1‑151 (MQ=255) gCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAc < 1:2786110/151‑1 (MQ=255) tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcct > 2:7689982/1‑150 (MQ=255) gATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctg < 1:684895/151‑3 (MQ=255) gATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctg > 2:6061516/1‑149 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctggt < 2:2710776/151‑5 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAAcctggt < 1:8361682/151‑5 (MQ=255) cGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGTA‑CCtggtg < 1:10922642/151‑1 (MQ=255) cGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtg > 1:8689612/1‑151 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtgg < 2:3127805/151‑1 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCtggtgg > 1:4559131/1‑151 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGaa > 2:1890061/1‑151 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCATGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGACGAAGAA‑CCTGGTGGacg > 1:1116074/1‑149 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGCTCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAg < 2:5261776/151‑1 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAg < 2:5861574/151‑1 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAg > 2:2566392/1‑151 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAg < 1:6549408/151‑1 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAg < 2:4823881/151‑1 (MQ=255) agaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAgg < 1:8068840/151‑1 (MQ=255) gaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggc > 2:2811112/1‑151 (MQ=255) aaCAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcg < 2:7411154/151‑1 (MQ=255) aCAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgc < 2:125481/151‑1 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcgg < 2:927893/151‑1 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcgg < 2:11018596/151‑1 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggc > 2:10769825/1‑151 (MQ=255) gCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAggcgcggc < 1:3090715/151‑1 (MQ=255) gggAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCt < 2:9706027/151‑1 (MQ=255) gAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTgg < 1:979528/151‑1 (MQ=255) aaGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGt < 2:7233201/151‑1 (MQ=255) aaGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGACCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCCCCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGCA‑CCTGGTGGAAGGCGCGGCGCTGGt < 2:3617983/151‑1 (MQ=255) gTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTG‑GTGGCCAAGGCCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGa > 2:6416765/1‑151 (MQ=255) tGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGAt < 2:5755971/151‑1 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc > 1:9202615/1‑151 (MQ=255) gCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGAC‑ACGGCCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcg > 2:2645715/1‑151 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACCAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt > 1:4009813/3‑151 (MQ=255) ggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTg < 2:4181898/150‑1 (MQ=255) ggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTg < 2:887067/150‑1 (MQ=255) cgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGct > 2:8382593/1‑151 (MQ=255) tcggCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCtt < 1:4295899/148‑1 (MQ=255) ggCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTcc > 2:3969723/2‑151 (MQ=255) cAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGt < 1:4465710/151‑1 (MQ=255) aGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGtt > 2:231089/1‑151 (MQ=255) aGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGtt > 1:10518576/1‑151 (MQ=255) aGCGCCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGtt < 1:5826456/151‑1 (MQ=255) cgcCTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTcc < 1:5393415/151‑1 (MQ=255) ccTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTc < 1:7918606/151‑1 (MQ=255) ccTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTc < 2:514061/151‑1 (MQ=255) cTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCg < 1:9950723/151‑1 (MQ=255) cTGGAGGAGATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCg > 1:5214175/1‑151 (MQ=255) aggagATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCaa > 1:2850931/1‑151 (MQ=255) aggagATCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCaa < 1:1448091/151‑1 (MQ=255) gagaTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACa < 2:9559760/151‑1 (MQ=255) gagaTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACa < 1:5911943/151‑1 (MQ=255) agaTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACAt < 2:5357708/151‑1 (MQ=255) agaTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACAt < 2:1689735/151‑1 (MQ=255) gaTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc > 1:5677830/1‑151 (MQ=255) aTCAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATcc < 1:3470136/151‑1 (MQ=255) cAACCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgc > 2:8190918/1‑151 (MQ=255) aaCCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcg < 2:4979418/151‑1 (MQ=255) aaCCGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGAGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcg < 1:6596004/151‑1 (MQ=255) ccGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg < 1:6069589/151‑1 (MQ=255) ccGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg > 2:7008702/1‑151 (MQ=255) ccGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg > 1:10705429/1‑151 (MQ=255) ccGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg < 1:7309180/151‑1 (MQ=255) ccGGACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCGGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg < 2:2368204/151‑1 (MQ=255) ggACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcggc > 1:10011890/1‑151 (MQ=255) gACCCTGCCCAAGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcggcg > 2:9388954/1‑151 (MQ=255) gcccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATc < 2:8710535/146‑1 (MQ=255) ccaaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAc > 1:10197084/4‑151 (MQ=255) caaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAcc > 2:3270445/3‑151 (MQ=255) caaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCAcc < 2:4657205/149‑1 (MQ=255) aaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCg < 1:8985725/150‑1 (MQ=255) aaGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCg > 2:1402365/2‑151 (MQ=255) aGGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGc > 1:406049/1‑151 (MQ=255) caaggCGATCTCCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCAACGGTGTAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatc < 2:9029895/147‑1 (MQ=255) caaggCGATCACCGTCTCCGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatc < 2:6477527/147‑1 (MQ=255) aaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatca < 1:4732985/148‑1 (MQ=255) aaggCGATCACCGTCTACGACAGCACAACCCTGTTGGACAAGG‑CCGTGGCCACGGAGAAGAATAA‑CAAGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTTTTCCTCGGCAACATCCGCTCGGCGCTGATCACCGCCACcatca > 1:3666472/4‑151 (MQ=255) aggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatcat < 1:2371809/149‑1 (MQ=255) ggCGATCACCGTCTACGACCGCACCACCCTTGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGAGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCatcatc < 2:8154970/150‑1 (MQ=255) tCACCGTCTACGACCGCACCACCCTGGTGGAC‑ATGGCCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGTTCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCAGCATCCCGCt > 1:4620118/1‑151 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACCAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGTTCGCGGTGCTCTTCCTGTTCCTCGGCAACAGCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTc > 2:7906569/1‑151 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTc < 2:10112422/151‑1 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTc > 1:3160739/1‑151 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTc < 1:8548528/151‑1 (MQ=255) ccGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTc > 1:6339909/1‑151 (MQ=255) cGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCg < 2:2149885/151‑1 (MQ=255) gTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGa > 1:10098230/1‑151 (MQ=255) gTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGa > 1:7168258/1‑151 (MQ=255) gTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGa > 1:10744584/1‑151 (MQ=255) tCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGAt < 2:3473166/151‑1 (MQ=255) cTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATg < 1:1706371/151‑1 (MQ=255) tACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGc > 2:5806597/1‑151 (MQ=255) gACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGt > 1:9553598/1‑151 (MQ=255) aCCGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGtt > 1:5989020/1‑151 (MQ=255) ccGCACCACCCTGGTGGACAAGG‑CCGTGGCCACGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttc < 2:6294535/151‑1 (MQ=255) | TCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCC‑AGGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCAC‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCT > NC_008463/2787740‑2788003 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |