BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_008463	3,489,979	(G)_5→4	pseudogene (154/718 nt)	PA14_RS15905 ←	DUF1294 domain‑containing protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_008463	3,489,975	0	G	.	100.0%	3060.1 / NA	614	pseudogene (158/718 nt)	PA14_RS15905	DUF1294 domain‑containing protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (260/354); total (260/354)

Only 100 of 652 total aligned reads displayed.

CCGGCCGTGCCTGGGCCCGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGCGGGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTCCATATCCACTCGCTCGCTACCCGTT  >  NC_008463/3489825‑3490121

   gccgTGCCTGGGCCCGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGCgggg                                                                                                                                                 >  1:978849/1‑151 (MQ=255)

   gccgTGCCTGGGCCCGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGCgggg                                                                                                                                                 >  2:2779236/1‑151 (MQ=255)

     cgTGCCTGGGCCCGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGCggggac                                                                                                                                               >  1:6368206/1‑149 (MQ=255)

      gTGCCTGGGCCCGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGCggggacg                                                                                                                                              <  1:2063211/151‑4 (MQ=255)

        gCCTGGGCCCGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGAcggc                                                                                                                                           <  2:7967162/151‑1 (MQ=255)

         ccTGGGCCCGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGAcggcg                                                                                                                                          <  2:1823495/151‑1 (MQ=255)

          cTGGGCCCGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGAcggcgg                                                                                                                                         <  2:3612552/151‑1 (MQ=255)

            gggCCCGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTc                                                                                                                                       >  1:1085674/1‑151 (MQ=255)

            gggCCCGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTc                                                                                                                                       >  1:7727474/1‑151 (MQ=255)

                ccGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACcg                                                                                                                                   <  2:8363649/151‑1 (MQ=255)

                 cgcgTCACCGGCGCCTGGGCGCCACGGCGGACCGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACcgc                                                                                                                                  <  1:9976354/151‑1 (MQ=255)

                 cgcgTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACcgc                                                                                                                                  >  1:8153679/1‑151 (MQ=255)

                 cgcgTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACcgc                                                                                                                                  <  2:11475918/151‑1 (MQ=255)

                 cgcgTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCGGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACcgc                                                                                                                                  <  2:11665403/151‑1 (MQ=255)

                    gTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGa                                                                                                                               >  1:11024834/1‑151 (MQ=255)

                    gTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGa                                                                                                                               <  2:1361982/151‑1 (MQ=255)

                       aCCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAAcg                                                                                                                            <  2:2651506/151‑1 (MQ=255)

                         cGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAAcgcg                                                                                                                          <  1:10286998/151‑1 (MQ=255)

                         cGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAAcgcg                                                                                                                          >  2:7252131/1‑151 (MQ=255)

                          ggCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCgg                                                                                                                         >  2:3225992/1‑151 (MQ=255)

                          ggCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCgg                                                                                                                         <  2:3782069/151‑1 (MQ=255)

                          ggCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCgg                                                                                                                         <  2:8876211/151‑1 (MQ=255)

                           gcgcCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGga                                                                                                                        <  2:6368366/151‑1 (MQ=255)

                            cgcCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGgag                                                                                                                       <  1:3156115/151‑1 (MQ=255)

                             gcCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGACCGCGgaga                                                                                                                      >  1:2953403/1‑151 (MQ=255)

                               cTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGata                                                                                                                    <  1:9616559/151‑1 (MQ=255)

                               cTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGata                                                                                                                    <  1:5252235/151‑1 (MQ=255)

                                tGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGatat                                                                                                                   >  1:10696433/1‑151 (MQ=255)

                                     gcCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAgg                                                                                                              <  2:10265911/151‑1 (MQ=255)

                                     gcCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAgg                                                                                                              <  2:7741969/151‑1 (MQ=255)

                                     gcCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAgg                                                                                                              <  1:10197371/151‑1 (MQ=255)

                                       cACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGaa                                                                                                            <  2:9647106/151‑1 (MQ=255)

                                        aCGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGTCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAg                                                                                                           <  2:3913194/151‑1 (MQ=255)

                                           gcggACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGAct                                                                                                        <  1:11532489/151‑1 (MQ=255)

                                           gcggACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGAct                                                                                                        <  1:9464756/151‑1 (MQ=255)

                                           gcggACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGAct                                                                                                        <  1:5582410/151‑1 (MQ=255)

                                             ggACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGActtc                                                                                                      <  1:8443791/151‑1 (MQ=255)

                                                cAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACttcttc                                                                                                   <  1:7875311/151‑1 (MQ=255)

                                                cAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACttcttc                                                                                                   <  2:4529087/151‑1 (MQ=255)

                                                cAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCACTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACttcttc                                                                                                   >  2:9343228/1‑151 (MQ=255)

                                                 aGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTcc                                                                                                  >  2:7376402/1‑151 (MQ=255)

                                                 aGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTcc                                                                                                  >  2:5094921/1‑151 (MQ=255)

                                                      gcggGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCccgcc                                                                                             >  1:155696/1‑151 (MQ=255)

                                                       cggGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCccgccg                                                                                            >  2:4013808/1‑151 (MQ=255)

                                                         ggTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGt                                                                                          <  2:3677920/151‑1 (MQ=255)

                                                         ggTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGt                                                                                          <  1:7367203/151‑1 (MQ=255)

                                                          gTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTc                                                                                         <  2:10604379/151‑1 (MQ=255)

                                                           tCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCt                                                                                        >  1:7114403/1‑151 (MQ=255)

                                                            cGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCtt                                                                                       >  1:900605/1‑151 (MQ=255)

                                                            cGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCtt                                                                                       <  1:6695391/151‑1 (MQ=255)

                                                             gAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGACCCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTc                                                                                      >  1:11255028/1‑151 (MQ=255)

                                                             gAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTc                                                                                      <  2:6909499/151‑1 (MQ=255)

                                                             gAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTc                                                                                      >  1:3772489/1‑151 (MQ=255)

                                                             gAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTc                                                                                      <  1:5864250/151‑1 (MQ=255)

                                                              aGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCg                                                                                     >  1:4045832/1‑151 (MQ=255)

                                                               gggTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCgg                                                                                    >  1:4564726/1‑151 (MQ=255)

                                                               gggTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCgg                                                                                    >  1:10449648/1‑151 (MQ=255)

                                                               gggTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCgg                                                                                    >  1:2797644/1‑151 (MQ=255)

                                                                ggTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGc                                                                                   <  1:4985274/151‑1 (MQ=255)

                                                                 gTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCa                                                                                  >  1:2272242/1‑151 (MQ=255)

                                                                   cAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAgg                                                                                <  1:4229655/151‑1 (MQ=255)

                                                                    aGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGa                                                                               <  2:10095499/151‑1 (MQ=255)

                                                                     gcgcGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGAt                                                                              <  1:1323283/151‑1 (MQ=255)

                                                                      cgcgTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATg                                                                             <  2:3529381/151‑1 (MQ=255)

                                                                       gcgTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATga                                                                            <  1:4313981/151‑1 (MQ=255)

                                                                        cgTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATgaa                                                                           <  1:8228936/151‑1 (MQ=255)

                                                                        cgTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATgaa                                                                           <  1:5347441/151‑1 (MQ=255)

                                                                          tCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATgaagc                                                                         <  1:8665667/151‑1 (MQ=255)

                                                                           ccAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATgaagcc                                                                        <  1:4788704/151‑1 (MQ=255)

                                                                           ccAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCAGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATgaagcc                                                                        <  2:1043261/151‑1 (MQ=255)

                                                                               ccGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATgaagccgaag                                                                    >  1:8809035/1‑151 (MQ=255)

                                                                                   gcCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCt                                                                >  2:2195084/1‑151 (MQ=255)

                                                                                     ccTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTg                                                              <  2:8059540/151‑1 (MQ=255)

                                                                                         tcGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGACGCCCTTgtcgt                                                          >  2:6015531/1‑151 (MQ=255)

                                                                                          cGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGAGGGCGGTCACCGCGGAACGCGGAGATATGCAGTAAGACTTCTTCCCCGCCGGTCTTCGGCTGTATTAAGCCGAAGCCCTTgtcgtc                                                         <  2:1978340/151‑1 (MQ=255)

                                                                                          cGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTgtcgtc                                                         >  1:6135550/1‑151 (MQ=255)

                                                                                          cGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTgtcgtc                                                         <  1:3603555/151‑1 (MQ=255)

                                                                                                  aGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGc                                                 >  2:11138058/1‑151 (MQ=255)

                                                                                                  aGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGc                                                 <  2:5783675/151‑1 (MQ=255)

                                                                                                      ggcCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCt                                             >  2:7885683/1‑151 (MQ=255)

                                                                                                       gcCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTg                                            <  2:1742458/151‑1 (MQ=255)

                                                                                                             ggCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATg                                      >  2:661123/1‑151 (MQ=255)

                                                                                                                gTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGccc                                   <  2:9747496/151‑1 (MQ=255)

                                                                                                                  ccTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCgg                                 >  1:10017017/1‑151 (MQ=255)

                                                                                                                   ctggctggCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGc                                >  2:1593569/1‑151 (MQ=255)

                                                                                                                   ctggctggCGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGc                                >  1:8020050/1‑151 (MQ=255)

                                                                                                                    tggctggcGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCt                               >  2:4299255/1‑151 (MQ=255)

                                                                                                                       ctggcGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCtttt                            <  2:920852/151‑1 (MQ=255)

                                                                                                                       ctggcGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCtttt                            <  2:1085921/151‑1 (MQ=255)

                                                                                                                         ggcGAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTcc                          >  1:7560160/1‑151 (MQ=255)

                                                                                                                            gAGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTCCaga                       >  2:4817476/1‑149 (MQ=255)

                                                                                                                             aGGAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTCCatat                      <  2:5374483/151‑1 (MQ=255)

                                                                                                                              ggAACCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTCCATATc                     >  2:2998676/1‑151 (MQ=255)

                                                                                                                                aaCCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTCCATATCCa                   >  2:8325076/1‑151 (MQ=255)

                                                                                                                                 aCCACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTCCATATCCAc                  <  1:11710128/151‑1 (MQ=255)

                                                                                                                                  ccACACCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTCCATATCCAct                 <  1:1912229/151‑1 (MQ=255)

                                                                                                                                      acCTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTCCATATCCActcgct             >  1:3348242/1‑151 (MQ=255)

                                                                                                                                       ccTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTCCATATCCActcgctc            <  1:7295897/151‑1 (MQ=255)

                                                                                                                                        cTGGTCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCTGTCTTCGGCAGGAAGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCAGGCCCGGCTTTTCCATATCCActcgctcg           <  2:7559523/151‑1 (MQ=255)

                                                                                                                                            tCGCCCTGGC‑GGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTCCATATCCACTCGCTCGCTAc       <  2:10956756/151‑1 (MQ=255)

CCGGCCGTGCCTGGGCCCGCGTCACCGGCGCCTGGGCGCCACGGCGGACAGTCGGCGGGTCGAGGGTCAGCGCGTCCAGCCGCGCCCTCTCGGCGCGCAGGCGGCCCTGGGCGTCCTGGCTGGCGAGGAACCACACCTGGTCGCCCTGGCGGGGGACGGCGGTCACCGCGGAACGCGGAGATATGCAGGAAGACTTCTTCCCCGCCGGTCTTCGGCAGGATGAAGCCGAAGCCCTTGTCGTCGTACCAGCGGCTGATCATGCCCGGCTTTTCCATATCCACTCGCTCGCTACCCGTT  >  NC_008463/3489825‑3490121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`