| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 3,909,637 | (G)5→4 | intergenic (‑133/+14) | PA14_RS17840 ← / ← brnQ | DUF599 domain‑containing protein/branched‑chain amino acid transport system II carrier protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 3,909,633 | 0 | G | . | 98.9% | 2208.7 / 14.5 | 460 | intergenic (‑129/+18) | PA14_RS17840/brnQ | DUF599 domain‑containing protein/branched‑chain amino acid transport system II carrier protein |
| Reads supporting (aligned to +/- strand): ref base G (2/3); new base . (223/229); total (227/233) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 485 total aligned reads displayed.
AAATGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTGGGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCG > NC_008463/3909483‑3909778 | aTGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggg < 1:9430207/151‑1 (MQ=255) tGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTgggg > 2:708442/1‑151 (MQ=255) tGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCAGGAAAAAGGCCGCCCGGAGGCGGCCTTCCTgggg > 2:5637674/1‑151 (MQ=255) gCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggt > 2:5246508/1‑150 (MQ=255) cGAGTTCGGCGGTCCTGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggttc < 1:4810692/151‑4 (MQ=255) gAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTggggttcg > 2:6682768/1‑147 (MQ=255) gTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGcc < 1:10101295/151‑1 (MQ=255) tCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTg > 2:11363037/1‑151 (MQ=255) cggcggTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGa > 2:270476/1‑151 (MQ=255) gcggTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACg > 1:9588388/1‑151 (MQ=255) tCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGtctc < 1:6627809/151‑1 (MQ=255) tCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGtctc > 2:3218362/1‑151 (MQ=255) cATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCa > 1:10403872/1‑151 (MQ=255) cATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCa > 1:2554816/1‑151 (MQ=255) aTGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAg > 1:5172248/1‑151 (MQ=255) aTGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAg > 1:3830347/1‑151 (MQ=255) tGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAgg > 1:9872981/1‑151 (MQ=255) aaaaCTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCg > 2:412907/1‑151 (MQ=255) aaaaCTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTGCCT‑GGGGTTCGCCTGACGTCTCAGGCg > 2:7556692/1‑151 (MQ=255) aaCTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGAc > 1:11309870/1‑151 (MQ=255) aaCTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGAc > 2:2901756/1‑151 (MQ=255) aCTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGAcc > 1:195631/1‑151 (MQ=255) cTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCg > 1:6400915/1‑151 (MQ=255) cTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCg > 1:4362516/1‑151 (MQ=255) ctctTGCGCCGGCCGGGAAACGCCCCGCCGTTGTAACCCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTc < 2:7743206/151‑1 (MQ=255) tctTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcg > 2:1009274/1‑151 (MQ=255) tctTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcg > 2:6887238/1‑151 (MQ=255) ctTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcgc > 1:3204162/1‑151 (MQ=255) tGAGCCGGCCGGGAATCGCCCCGCCGGTGTGTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcgcgc < 2:8041351/151‑1 (MQ=255) gAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTcgcgcg < 1:6781658/151‑1 (MQ=255) aGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCTGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGGGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCgg > 2:1717990/1‑151 (MQ=255) aGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCgg < 1:8100959/151‑1 (MQ=255) gccggccgGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGc < 1:1366663/151‑1 (MQ=255) cggccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCtt > 2:9397431/1‑151 (MQ=255) ggccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTg > 2:1121741/1‑151 (MQ=255) ccggGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGcc > 1:2865603/1‑151 (MQ=255) aaTCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCcagca > 2:2576642/1‑151 (MQ=255) cGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGcc > 1:7121710/1‑151 (MQ=255) gCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCg < 1:11693982/151‑1 (MQ=255) ccgccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATc > 1:8723961/1‑151 (MQ=255) gccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGc < 2:1526653/151‑1 (MQ=255) gccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGc > 1:1063619/1‑151 (MQ=255) ccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCa < 1:3078410/151‑1 (MQ=255) ccgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCa > 1:5618653/1‑151 (MQ=255) cgTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCaa > 1:1796936/1‑151 (MQ=255) tttCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGAc > 2:1280837/1‑151 (MQ=255) tttCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGAc > 1:10960242/1‑151 (MQ=255) ttCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACt > 2:10226037/1‑151 (MQ=255) ttCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACt < 1:4333302/151‑1 (MQ=255) cgcgCCGTTGGGACGCCGCTCGCCGCGGCCAGTACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTATCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCTATCGCAAACGACTGc < 1:7500240/151‑1 (MQ=255) cgcgCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAATAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGc > 1:2041021/1‑151 (MQ=255) gcgcCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGcc > 1:10054923/1‑151 (MQ=255) cGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGa < 1:926764/151‑1 (MQ=255) ttGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGAcc < 2:3123736/151‑1 (MQ=255) tGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCa < 2:641216/151‑1 (MQ=255) tGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCa < 2:3415614/151‑1 (MQ=255) gggACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAg > 2:3760291/1‑151 (MQ=255) gACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAgcg < 2:3475905/151‑1 (MQ=255) gACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAgcg > 2:7324094/1‑151 (MQ=255) gACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAgcg < 2:5090737/151‑1 (MQ=255) gACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAgcg > 2:3692927/1‑151 (MQ=255) aCGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAgcgc > 1:11513275/1‑151 (MQ=255) gccgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCTGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCTCGCCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCaa > 2:5994468/1‑151 (MQ=255) ccgcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAAt < 1:7945096/151‑1 (MQ=255) gcTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATgg > 2:8142954/1‑151 (MQ=255) tCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGAt < 2:10530106/151‑1 (MQ=255) tCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGATTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGAt < 1:11068030/151‑1 (MQ=255) gccgcTGCCAGGACACGACTTTCGTCGGCTCATGAAAATGGCGGCCAGGAGGAGGACTTCCT‑GGGGTTAGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCGCAGAAGCCTATCGCAAACGACTGCCAGGACCAGCGCAATgtagac < 2:2224019/151‑6 (MQ=255) gccgcGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATAc < 1:23377/151‑1 (MQ=255) ccgcGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATAcc < 1:5758674/151‑1 (MQ=255) cgcgGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCg > 2:5364632/1‑151 (MQ=255) cAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGgcagca > 2:4311629/1‑151 (MQ=255) gACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagcc < 2:8579051/151‑1 (MQ=255) acacGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagcca < 2:8701173/151‑1 (MQ=255) cacGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGcagccag > 1:350844/1‑151 (MQ=255) cGACTTTCGTCGGCTCATGAAATAGGACGCCCGGAGTCGGCCTTCCTGGGGG‑TCGCCTGACGTCTCCGGCGACCGCTTCGCGCGGCTTGCCCAGCCGCCGATCGCAACCGACGGCCCGGACCAGCGCACAGGATACCGGCAGCagcccgcc > 2:9335656/1‑151 (MQ=255) cGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACAGCCAGGACCAGCGCAATGGATACCGGCAGCagccagcc > 1:6450570/1‑151 (MQ=255) gACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAgccagcca > 2:4492784/1‑151 (MQ=255) ctgtcgtcgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAg < 1:7678409/148‑1 (MQ=255) tcgtcgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTGAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGCTCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCACGGct < 2:11695244/151‑1 (MQ=255) cgtcgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGctc > 1:10756381/1‑151 (MQ=255) gtcgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGctct > 2:10786229/1‑151 (MQ=255) tcgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTg < 2:2507722/151‑1 (MQ=255) cgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGa < 2:4703263/151‑1 (MQ=255) cgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGa > 2:461257/1‑151 (MQ=255) cgGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGa < 1:4104009/151‑1 (MQ=255) ggCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGAt < 2:2114388/151‑1 (MQ=255) gCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATc > 1:1718793/1‑151 (MQ=255) acgacaaaGGCCGCCCGGAGGCGGCCTACCT‑GGGGTTCGCCTGACGACTCAGGCGACCGCTTCGCGCGGCTTGCCCCGCAGCCGATCGCAAACGACTGCCAGGACCCGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGTTCGGCg < 1:5005243/146‑1 (MQ=255) aTGAAAAAGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCg < 2:8649584/151‑1 (MQ=255) aaaGGCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCgg > 2:9577114/1‑151 (MQ=255) ggCCGCCCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAg < 2:10372961/151‑1 (MQ=255) cgccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCtt < 1:9115679/151‑1 (MQ=255) gccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCTATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTg < 1:6311619/151‑1 (MQ=255) gccCGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCACAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTg < 2:6105599/151‑1 (MQ=255) cGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCg < 1:3632299/151‑1 (MQ=255) cGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCg > 2:4851541/1‑151 (MQ=255) cGGAGGCGGCCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCg < 2:9005650/151‑1 (MQ=255) gcggcCTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGAc < 1:2236124/151‑1 (MQ=255) cTTCCT‑GGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCg < 1:8007221/151‑1 (MQ=255) | AAATGCCGAGTTCGGCGGTCATGAAAACTCCCTCTTGAGCCGGCCGGGAATCGCCCCGCCGTTGTTTCGCGCCGTTGGGACGCCGCTCGCCGCGGCCAGGACACGACTTTCGTCGGCTCATGAAAAAGGCCGCCCGGAGGCGGCCTTCCTGGGGGTTCGCCTGACGTCTCAGGCGACCGCTTCGCGCGGCTTGCCCAGCAGCCGATCGCAAACGACTGCCAGGACCAGCGCAATGGATACCGGCAGCAGCCAGCCAAGGCTCTGATCGGCGAGCGGGAGCTTGGCGAAGACGTCCG > NC_008463/3909483‑3909778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |