Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 4,700,807 Δ1 bp intergenic (+165/‑150) PA14_RS21585 → / → pbpG aspartate/tyrosine/aromatic aminotransferase/D‑alanyl‑D‑alanine endopeptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084634,700,8070G.99.8% 2859.3 / ‑1.1 579intergenic (+165/‑150)PA14_RS21585/pbpGaspartate/tyrosine/aromatic aminotransferase/D‑alanyl‑D‑alanine endopeptidase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base . (230/347);  minor base C (1/0);  total (232/347)
Fisher's exact test for biased strand distribution p-value = 4.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 579 total aligned reads displayed.

AGCCGGCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCGCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGAGCAAC  >  NC_008463/4700661‑4700952
                                                                                                                                                  |                                                                                                                                                 
 gCCGGCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAAcc                                                                                                                                             >  1:8088286/1‑151 (MQ=255)
  ccGGCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACct                                                                                                                                            <  1:2990709/151‑1 (MQ=255)
  ccGGCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACct                                                                                                                                            >  1:400186/1‑151 (MQ=255)
   cGGCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACctc                                                                                                                                           >  2:3246124/1‑151 (MQ=255)
    ggCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACctct                                                                                                                                          >  1:9477498/1‑151 (MQ=255)
    ggCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACctct                                                                                                                                          <  2:434924/151‑1 (MQ=255)
      cTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTcc                                                                                                                                        <  1:2082238/151‑1 (MQ=255)
       tgtgATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCg                                                                                                                                       >  1:152380/1‑151 (MQ=255)
       tgtgATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCg                                                                                                                                       >  2:6869249/1‑151 (MQ=255)
       tgtgATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCg                                                                                                                                       <  1:1034655/151‑1 (MQ=255)
           aTGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAAcc                                                                                                                                   >  1:6013187/1‑151 (MQ=255)
           aTGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAAcc                                                                                                                                   >  2:3408328/1‑151 (MQ=255)
            tGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCg                                                                                                                                  >  2:1806185/1‑151 (MQ=255)
            tGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCg                                                                                                                                  <  1:4673576/151‑1 (MQ=255)
              gCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTg                                                                                                                                <  2:2678555/151‑1 (MQ=255)
                   cTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAAc                                                                                                                           >  2:11741575/1‑151 (MQ=255)
                     ttttttCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCa                                                                                                                         <  1:5541967/151‑1 (MQ=255)
                      tttttCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCAt                                                                                                                        >  1:10042889/1‑151 (MQ=255)
                        tttCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATaa                                                                                                                      >  1:7160762/1‑151 (MQ=255)
                          tCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGt                                                                                                                    >  2:1115062/1‑151 (MQ=255)
                            gCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCa                                                                                                                  <  2:172844/151‑1 (MQ=255)
                               ccAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCa                                                                                                               <  1:7789543/151‑1 (MQ=255)
                                      aTGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCaa                                                                                                        <  2:9508742/151‑1 (MQ=255)
                                         ccGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCCCGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGc                                                                                                     <  1:10575107/151‑1 (MQ=255)
                                         ccGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGc                                                                                                     >  2:6010307/1‑151 (MQ=255)
                                          cgcgCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGcc                                                                                                    >  2:2013719/1‑151 (MQ=255)
                                           gcgcACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGccc                                                                                                   <  1:4915620/151‑1 (MQ=255)
                                           gcgcACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGccc                                                                                                   <  2:8295920/151‑1 (MQ=255)
                                               aCTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACg                                                                                               >  2:8102088/1‑151 (MQ=255)
                                               aCTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACg                                                                                               >  2:8779832/1‑151 (MQ=255)
                                                cTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGt                                                                                              >  1:1816451/1‑151 (MQ=255)
                                                cTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGt                                                                                              <  1:1216657/151‑1 (MQ=255)
                                                 tCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTg                                                                                             >  1:7369589/1‑151 (MQ=255)
                                                   ccgccgAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCt                                                                                           <  1:4357466/151‑1 (MQ=255)
                                                   ccgccgAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCt                                                                                           <  2:10323219/151‑1 (MQ=255)
                                                      ccgAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCtttt                                                                                        <  1:7510340/151‑1 (MQ=255)
                                                      ccgAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCtttt                                                                                        <  1:6989190/151‑1 (MQ=255)
                                                      ccgAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCtttt                                                                                        <  2:5211100/151‑1 (MQ=255)
                                                         aGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCt                                                                                     <  2:5912805/151‑1 (MQ=255)
                                                            cggcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACa                                                                                  <  2:1548522/151‑1 (MQ=255)
                                                            cggcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACa                                                                                  <  2:4194283/151‑1 (MQ=255)
                                                             ggcggTTAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCGCTCCGAACCGTGCCAACCATAAGGCAGCACTTTCAATGCCCTACGTGCTTGTCCTACaa                                                                                 >  1:1350720/1‑151 (MQ=255)
                                                             ggcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACaa                                                                                 <  1:3554101/151‑1 (MQ=255)
                                                             ggcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACaa                                                                                 <  1:9942050/151‑1 (MQ=255)
                                                             ggcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTGTCCTACaa                                                                                 >  2:10874342/1‑151 (MQ=255)
                                                              gcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACaaa                                                                                <  1:7438517/151‑1 (MQ=255)
                                                              gcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACaaa                                                                                >  1:11454208/1‑151 (MQ=255)
                                                              gcggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACaaa                                                                                <  1:8382370/151‑1 (MQ=255)
                                                               cggATAACCGCGGTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACaaaa                                                                               <  2:9828975/151‑1 (MQ=255)
                                                                ggATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAag                                                                              >  2:7436102/1‑151 (MQ=255)
                                                                  aTAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAagag                                                                            <  1:2240171/151‑1 (MQ=255)
                                                                   tAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGc                                                                           <  2:11357096/151‑1 (MQ=255)
                                                                     aCCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCAt                                                                         >  2:358755/1‑151 (MQ=255)
                                                                     aCCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCAt                                                                         >  2:2465727/1‑151 (MQ=255)
                                                                     aCCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCAt                                                                         <  2:5553377/151‑1 (MQ=255)
                                                                         cgTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATaaaa                                                                     >  2:7603718/1‑151 (MQ=255)
                                                                           ttGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGGAGGGCGAATACCGCCACAGGCGTGATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATg                                                                   <  2:7045643/151‑1 (MQ=255)
                                                                           gtGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCACCCATAAGTCAGCACTTTCAAAGCCCGACGTGCTTTTCCTACAAACGAGCATAAAATg                                                                   <  2:10569252/150‑1 (MQ=255)
                                                                                   aTTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTa                                                           >  2:2405979/1‑151 (MQ=255)
                                                                                      cGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAATAGAGCATAAAATGCTCAATTATgg                                                        >  2:2893747/1‑151 (MQ=255)
                                                                                       gCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAAAACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATggg                                                       >  2:6257985/1‑151 (MQ=255)
                                                                                         ccTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAACAGAGCATAAAATGCTCAATTATGGGCa                                                     >  2:4709755/1‑151 (MQ=255)
                                                                                          cTACCGCACCACGACCTTGGGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGTACCGTGCCAACCATAAGTCAGCACTTTCTAAGCCCTACGTGCTTTTCCTACCAAAGAGCATAAAATGCTCAATTATGGGCAc                                                    <  1:10981591/151‑1 (MQ=255)
                                                                                           tACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCAcc                                                   <  1:5237895/151‑1 (MQ=255)
                                                                                            aCCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCa                                                  >  2:959592/1‑151 (MQ=255)
                                                                                            aCCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCa                                                  <  2:4511146/151‑1 (MQ=255)
                                                                                             ccGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAg                                                 <  1:9174039/151‑1 (MQ=255)
                                                                                              cGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGt                                                >  1:3328751/1‑151 (MQ=255)
                                                                                              cGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGt                                                <  2:9301178/151‑1 (MQ=255)
                                                                                              cGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGt                                                >  2:6135990/1‑151 (MQ=255)
                                                                                                caccacGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACAGTGCCAAACATAAGTCAGCAATTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTc                                              >  2:2217336/1‑151 (MQ=255)
                                                                                                   cacGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTcaca                                           >  2:3780372/1‑151 (MQ=255)
                                                                                                     cGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACt                                         <  2:3963476/151‑1 (MQ=255)
                                                                                                      gACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTg                                        <  1:11123647/151‑1 (MQ=255)
                                                                                                      gACCTTGTGGGCGTAGGGCGAATACCGCAACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTCCGTGCTTTTCCTACAAAAGAGCATAACCTGCTCAATTATGGGCACCAGTTCACACTg                                        <  1:5077969/151‑1 (MQ=255)
                                                                                                       aCCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTgc                                       >  1:8859647/1‑151 (MQ=255)
                                                                                                       aCCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTgc                                       <  1:2821837/151‑1 (MQ=255)
                                                                                                              gggCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCAc                                <  1:7066053/151‑1 (MQ=255)
                                                                                                              gggCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCAc                                >  2:510244/1‑151 (MQ=255)
                                                                                                                gCGTAGGGCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACgg                              >  1:9781104/1‑151 (MQ=255)
                                                                                                                     gggCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGccccc                         >  1:4242305/1‑151 (MQ=255)
                                                                                                                       gCGAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCAc                       >  2:2961433/1‑151 (MQ=255)
                                                                                                                         gAATACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACtt                     >  2:8385144/1‑151 (MQ=255)
                                                                                                                           aTACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTtc                   >  1:3449718/1‑151 (MQ=255)
                                                                                                                           aTACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTtc                   >  1:7885231/1‑151 (MQ=255)
                                                                                                                           aTACCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTtc                   >  2:7902977/1‑151 (MQ=255)
                                                                                                                             aCCGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTtctc                 >  2:8981640/1‑151 (MQ=255)
                                                                                                                               cGCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGt               <  1:10141427/151‑1 (MQ=255)
                                                                                                                                gCCACAGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTc              >  1:3727121/1‑151 (MQ=255)
                                                                                                                                  cacaGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCtt            >  2:775729/1‑151 (MQ=255)
                                                                                                                                  cacaGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCtt            <  1:6556994/151‑1 (MQ=255)
                                                                                                                                  cacaGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCtt            <  1:10837141/151‑1 (MQ=255)
                                                                                                                                    caGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATACGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAg          <  1:6379391/151‑1 (MQ=255)
                                                                                                                                    caGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAg          <  2:8820973/151‑1 (MQ=255)
                                                                                                                                     aGGCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGt         <  1:2627240/151‑1 (MQ=255)
                                                                                                                                       gCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGa       <  1:1718109/151‑1 (MQ=255)
                                                                                                                                       gCGTTATCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTGTCTCGTCTTAGTGa       >  2:9087767/1‑151 (MQ=255)
                                                                                                                                        cGTGATCCGCCGAACCTCTCCGAACCGGGCCAACCAGAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAACGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGAg      <  2:6569807/151‑1 (MQ=255)
                                                                                                                                            aTCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGAGCAAc  <  1:11650353/151‑1 (MQ=255)
                                                                                                                                            aTCCGCCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGAGCAAc  <  1:5373387/151‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
AGCCGGCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACCGCACCACGACCTTGTGGGCGTAGGGCGAATACCGCCACAGGCGTTATCCGCGCGAACCTCTCCGAACCGTGCCAACCATAAGTCAGCACTTTCAAAGCCCTACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGAGCAAC  >  NC_008463/4700661‑4700952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: