Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084634,616,4480GC30.5% 270.0 / 46.1 178intergenic (‑168/+34)hda/PA14_RS21180DnaA regulatory inactivator Hda/DUF2066 domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base G (74/49);  new base C (52/2);  total (126/52)
Fisher's exact test for biased strand distribution p-value = 1.62e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 191 total aligned reads displayed.

ATCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCAG  >  NC_008463/4616298‑4616598
                                                                                                                                                        |                                                                                                                                                           
aTCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCg                                                                                                                                                             >  2:7787158/1‑151 (MQ=255)
  ccGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGcg                                                                                                                                                           >  2:9474520/1‑150 (MQ=255)
    gAAAACGCCGCAGGAGTCACCGTAACGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTcc                                                                                                                                                         <  1:4010352/151‑1 (MQ=255)
    gAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GGCGGCCCGCGcc                                                                                                                                                         >  1:3202092/1‑151 (MQ=255)
      aaaCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCACAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑CCCGGCCCCCACCgg                                                                                                                                                       >  2:6799725/1‑150 (MQ=255)
      aaaCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCCGGCCGcggcgg                                                                                                                                                       >  1:5743583/1‑146 (MQ=255)
       aaCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCCCCCCGCGCCggt                                                                                                                                                      >  1:4846257/1‑149 (MQ=255)
       aaCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCCGCCCGCGcccga                                                                                                                                                      >  1:8322181/1‑148 (MQ=255)
       aaCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCCGCCCCCTCCggt                                                                                                                                                      >  2:6338797/1‑149 (MQ=255)
        aCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTCTACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAATGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGGCCGCGCCGTTg                                                                                                                                                     >  2:11619289/1‑151 (MQ=255)
        aCGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTCGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTg                                                                                                                                                     <  2:1073987/151‑1 (MQ=255)
          gccgcAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCa                                                                                                                                                   <  2:1027613/151‑1 (MQ=255)
           ccgcAGGAGTCACCGTTAAGGCTGCAAAGTTTATACGCCTCGGCAAGGACGCACAATGAGCAACTAGGCAAGAAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCAt                                                                                                                                                  <  2:4906807/151‑1 (MQ=255)
               aGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAACTCAACGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCATAGGa                                                                                                                                              <  2:8899354/151‑1 (MQ=255)
               aGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCGGGCCGCGCCGGTGGATAggt                                                                                                                                              >  1:6669786/1‑150 (MQ=255)
               aGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCGGCCCGCGCCCTTGCAAAggg                                                                                                                                              >  2:6063299/1‑150 (MQ=255)
                ggAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCCCACCGTTGCATATGAg                                                                                                                                             >  2:6647763/1‑151 (MQ=255)
                 gAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCACCCGTGCATAGgcgc                                                                                                                                            >  2:704507/1‑151 (MQ=255)
                  aGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCACAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCCGCCCGCACCCTTGGAAAGGAGCg                                                                                                                                           >  2:1151692/1‑151 (MQ=255)
                  aGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCATAGGAGCg                                                                                                                                           <  2:3314095/151‑1 (MQ=255)
                     cACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GGCGGCCCCCGCCCATGCCTAGGAGAggta                                                                                                                                        >  1:1673819/1‑149 (MQ=255)
                     cACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCGGGCCGCGCCGGGGCATAGGATCgggg                                                                                                                                        >  1:4647894/1‑149 (MQ=255)
                     cACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCATAGGAGCGGAt                                                                                                                                        <  1:11610129/151‑1 (MQ=255)
                       ccGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAAAGAGCAACTAGGCAAGCAAACTCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCATAGGAGCGGATCg                                                                                                                                      <  2:6240060/151‑1 (MQ=255)
                        cGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCCCAATGAGCAACTAGGCAAGCAAACTCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCATAGGAGCGGATCgg                                                                                                                                     <  1:737820/151‑1 (MQ=255)
                        cGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCACAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCCGCCCCCGCCGTGGGATATGCGCgggtggg                                                                                                                                     >  2:1208517/1‑146 (MQ=255)
                        cGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCCCGCCCGTGCATAGGCGCGGATAgg                                                                                                                                     >  2:8191898/1‑151 (MQ=255)
                        cGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCCGCCCGCACCGTTGCATAGGAGCGGATCgg                                                                                                                                     >  2:10638896/1‑151 (MQ=255)
                         gTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAACTCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCATAGGAGCGGATCGgc                                                                                                                                    <  1:707490/151‑1 (MQ=255)
                         gTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCATAGGAGCGGATCGgc                                                                                                                                    <  1:6590289/151‑1 (MQ=255)
                           aaaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCATAGGAGCGGATCGgcgc                                                                                                                                  <  2:7563566/151‑1 (MQ=255)
                           aaaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCCCGCCGTTGCATATGATCGGTTAGgcgc                                                                                                                                  >  2:3639009/1‑151 (MQ=255)
                            aaGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCCGCCCGCGCCCTTGCCTAGGAGCGGATCGgcgcg                                                                                                                                 >  2:8540047/1‑151 (MQ=255)
                             aGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCACAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCGGCCCCGACCCGTGCCAAGGTTCGGGTCGgcgcgc                                                                                                                                >  2:97711/1‑151 (MQ=255)
                              ggCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCCGCCCGCGCCCGTGGGTAGGGTCGGGTGGGCGCGcc                                                                                                                               >  1:5470371/1‑151 (MQ=255)
                                cTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCCGCCCCCGCCCGTGCAGAGGAGCGGGTAGgggcggccc                                                                                                                             >  1:5735239/1‑147 (MQ=255)
                                 tGCACAGTTTCTCCGCCTCGGCAAGGCCGCACAATGAGCAACGCGGCAAGAAAAATCAACGGTTTGCCGATCGCCGAGGCTCCTTGCCCA‑GCGCATCGCCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCATAGGAGCGGATCGGCGCGCCGAc                                                                                                                            <  2:5120096/151‑1 (MQ=255)
                                 tGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCACAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCGCCGGAGCGTAGGAGGGGGGAGGGGCGCCGAc                                                                                                                            >  2:8323406/1‑151 (MQ=255)
                                 tGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCCCGCCGGTGGCTAGGAGCGGATCGGCGCGCCGAc                                                                                                                            >  2:9236498/1‑151 (MQ=255)
                                 tGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCCCACCGGTGCATAGGGGCGGGTCGGCGCGCCGAc                                                                                                                            >  2:5395519/1‑151 (MQ=255)
                                    aaaGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCGGGCCCCCCCCGTGCAGAGGAGCGGATGGGCGCGCCgccacc                                                                                                                         >  1:505618/1‑146 (MQ=255)
                                    aaaGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCAACGTTTCAATGGAGGGGGTCGGCGCGGCGAcaga                                                                                                                         >  2:1658089/1‑148 (MQ=255)
                                     aaGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCCAAGGTTTGCCGATAGCCGAGGCTCCGTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCGCCGGTGCCGAGGTGCGGGTCGGCGCGcccccgcac                                                                                                                        >  2:7326072/1‑144 (MQ=255)
                                     aaGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCGGCCCCCGCCCGTGGCTAGGAGCGGGTCGGCGCGCCCacac‑ac                                                                                                                       >  1:597626/1‑151 (MQ=255)
                                         ttATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCCAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCGCCGGTGGCTAGGGGCGGCTCGGCGCGCCGCCAC‑ACAGcc                                                                                                                   >  2:10612023/1‑151 (MQ=255)
                                          tataCGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCGCCGGTGCAGATGAGCGGAGCGGCGCGCCGCCAC‑ACAGccc                                                                                                                  >  2:9330775/1‑150 (MQ=255)
                                               gCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCCGCCCCCTCCCGTGGCGAGGAGCGGTTAGGCGCGCCGACGC‑ACAGcccccggc                                                                                                             >  2:9902674/1‑145 (MQ=255)
                                               gCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCCCACCCGTGCATAGGAGCGGATCGGCGCGCCGACAC‑ACAGCC‑CCC‑GG‑a                                                                                                          >  2:734096/1‑151 (MQ=255)
                                               gCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCCGGCCGCGCCGGTTCAAAGGTGCGCATCGGCGCGCCCCCGC‑ACTGCC‑CGC‑GG‑a                                                                                                          >  2:1301024/1‑151 (MQ=255)
                                                 cTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCCTAGGAGCGGCTAGGGGCGCCGACTC‑ACAGCC‑CGC‑GG‑gaa                                                                                                        >  2:6496048/1‑151 (MQ=255)
                                                 cTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGGTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑CGC‑GG‑aaa                                                                                                        >  2:10165157/1‑151 (MQ=255)
                                                   cGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGGCCGCTGCGGTGCATAGGAGCGGCTCGGCGCGCCGGCTC‑ACAGCC‑CGC‑GG‑AAAtt                                                                                                      >  2:7715515/1‑151 (MQ=255)
                                                   cGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTGCGTGTCAGTGGTGCGGGTAGGCGCGCCGCCAC‑ACAGCC‑CAC‑GG‑AAAtt                                                                                                      >  2:1615195/1‑151 (MQ=255)
                                                    ggCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCGCCGTTGCAAAGGAGCGGATCGGCGCGCCGCCTC‑ACAGCC‑CGC‑CG‑GAATTc                                                                                                     >  2:6592757/1‑151 (MQ=255)
                                                       aaGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCCCACCGGTGCAAAGGAGCGGATCGGCGCGCCGCCAC‑ACAGCC‑ACC‑GG‑AAATACact                                                                                                  >  2:6820219/1‑149 (MQ=255)
                                                        aGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GGCGGCCCGCTCCCTTGCCTAGGAGCGGGTCGGGGCGCCGACTC‑ACGGCC‑AGC‑GG‑AAAttaactt                                                                                                 >  2:11159421/1‑146 (MQ=255)
                                                             gCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCGGCCCCCACCGGTGGCTAGGGGCGGATGGGCGCGCCGACTC‑CCAGCC‑CCC‑GG‑GAATTCAATTggggc                                                                                            >  2:4392674/1‑149 (MQ=255)
                                                                caATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCCGCCCGCACCCGTGCAAAGGAGCGGATCGGGGCGCCCACAC‑ACAGCC‑CCC‑GG‑GAAATAAGGTGGgacgac                                                                                         >  2:10494595/1‑151 (MQ=255)
                                                                    gAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCCGCCCGCGCCCGTTCAGATGAGCGGAGAGGCGCGCCCCCAA‑ACAGCC‑AGC‑GG‑CACTTAAAGTGGGgcgacc‑acg                                                                                    >  2:2866275/1‑151 (MQ=255)
                                                                       cAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCCGCCCCCGCCCGTGGCTATGAGCGGTTCGGCGCGCCGCCAC‑ACAGCC‑CCC‑GG‑AACTTAATTTGGggcgacg‑aaagcc                                                                                 >  2:561967/1‑146 (MQ=255)
                                                                               caagcaaAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GGCGGCCCGCGCCGGTGCGTAGGGGAGGGTCCGCGCGCCCGCAC‑GCGGGC‑CGCGGG‑AAATTC‑GTGGGGAAGGCG‑ACGGCCCCgcggcg                                                                         >  2:3725854/1‑151 (MQ=255)
                                                                               aaacaaaaaTCAACGGTTGGCCTATCGCCGTGGCCCCTTCCCCT‑GCGCAGCGGCGGGCCGCGC‑GCCGGCCCGCTCGTTGGCATTGGAGCGTTGCGGCGCCCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCcgcg                                                                         <  2:5690054/146‑1 (MQ=255)
                                                                                  gcaaAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCGGCCCCCGCCGGTGGAGAGGTGCGGTTAGGGGCGCCGACGC‑ACATCC‑CGC‑GG‑TAATTGAGGTGGGACGTCC‑GCGGGACCGCCccgcgg                                                                      >  2:4697366/1‑149 (MQ=255)
                                                                                       aTCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCCGCCCCCTCCCGTGGCTAGGGGCGGAAAGGCCCGCCCACAA‑ACAGCC‑CAC‑GG‑CAAATAAGTTGGGCCGTCG‑ACCGCACCGCCCCGCAGGgcgc                                                                 >  2:7811437/1‑151 (MQ=255)
                                                                                       aTCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGGCCCCTCCGTTTCAAAGGAGCGGAGGGGCGCGCCCACCC‑ACGGCC‑CGC‑GG‑AAAATAAGTTGGGGCGACG‑ACGGGACCGCCGCGCCGGgcgg                                                                 >  2:2496706/1‑150 (MQ=255)
                                                                                       aTCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCCCTCAGTTGAAGAGGAGCGGCTAGGCGCGCCGCCGA‑ACTGCC‑CGC‑GGTAAATAAGGTTGGGA‑GACC‑TCCGCCACGCCGCGCAGGgggc                                                                 >  2:9114312/1‑151 (MQ=255)
                                                                                           atggTTTGCCGTTCGCCGCGG‑GCCCTGCCCACGCGAATCGGCCGGCCGCGC‑GCCGGCCGCCCCCTTTGCATGGGTGCGGCTCGGCGCCCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCg                                                             <  2:3175840/149‑1 (MQ=255)
                                                                                              gTTTGCCGATAGCCGAGGCTCCGTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCCGCGCCCCCCGATGAACAGGGTCGGATAGGCGCGGCGACTC‑ACATCC‑AGC‑GG‑GAATTACGTTTGGACGACC‑CAGGCCCCCACGCGCGGGGGGCTGAGGGc                                                          >  2:7821195/1‑151 (MQ=255)
                                                                                                 tGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GGCGGGCCGCGGCCGTGCATAGGAGCGGGTGGGCGCGCCGCCAC‑CCAGCC‑CCC‑GG‑GGATTCAGGGGGGGCGGCC‑GCGGCCCCGCCCCGCGGGGGGGGGcgggcggg                                                       >  2:8103162/1‑151 (MQ=255)
                                                                                                     gATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCGGCCCGCGCCGGTGGCGATGTGCGGATGCGGGCGCCCCCAC‑ACAGCC‑ACC‑GG‑CCAAAAAGTTTGGGCGACG‑ACGGGACCCCCCCCCAGGGCGGTGCGggcggggcgg                                                   >  2:10929890/1‑151 (MQ=255)
                                                                                                        aGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCCGCCCCCGCCCGTGGATTTGAGCGGTGACGGGCGCCGCCAA‑CCAGCC‑CCC‑GG‑GAAATAAATTTGGACGACC‑AAGGCACCCCCCCGCGGGGCGCGGCGGGCGGGGCGgggg                                                >  2:5484991/1‑151 (MQ=255)
                                                                                                             aGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGCGGCCGCCCCCACCCGTTCCA‑AGGAGCGGGTCGGCGCGCCCACACAAAGGCC‑CCC‑GG‑AAA‑TAAGTTGGGGCGACGAACGCCACC‑CCGCCCGGGGGGCGGCGGGCGGGCCGGGGGccacc                                           >  2:9330553/1‑147 (MQ=255)
                                                                                                                   cTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GGCGGCCCCCGCCGGTGGCTTGGGTCGGGAAGGCGCGCCGGAGA‑ACTGGC‑AGC‑GG‑AACGTCAGGTGGGGCGACG‑GCGGCGCCGCCCGGGGGGGCGGGGGGGGGTGGCGGGGGGCCTCCAGCggg                                     >  2:11382355/1‑150 (MQ=255)
                                                                                                                   cTTGCCCA‑GAGCATCGGCCGGTCGCGG‑GCCCGCCCCCGCCGGTGCATAGGAGGGGCTCGGGGCGCCGGCAC‑ACAGCCAACC‑GC‑AAATAAAGTTGGG‑CGACG‑AAGCCACCCCCGCGCGGGGGGCGGCGGGGGGGGCGGAGGCCACCAGCCGt                                     >  2:5575472/1‑151 (MQ=255)
                                                                                                                            tagcagcGGCGGGCCGCGC‑GCCGGCCCGCTCCGTGGCTTTGGTGCGGTGCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTc                             <  2:6193850/150‑1 (MQ=255)
                                                                                                                             ccccccggccggcCGCCC‑GCCGCCCCGCCCGTTTTAAGAGGCGCGGATCGGCGCGCCGACTC‑ACAGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCg                            <  2:7740576/146‑1 (MQ=255)
                                                                                                                               cagcggcggGTGGCGC‑GCCGCCCCGCCCGGTTGCATCGGCGGGGAGCGGGGCCCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGc                          <  2:9205066/148‑1 (MQ=255)
                                                                                                                                aggggCGGGGCGCGC‑GCCGGCCCGCTCCGGTGCATCGGGGCGGCCGGCCGCCCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGcc                         <  2:7913571/148‑1 (MQ=255)
                                                                                                                                agcGGCCGGTCGCGC‑GCCGCCCCGCTCCGTTGCTTAGGTGGGGAGCGGCGCCCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGcc                         <  2:6728351/149‑1 (MQ=255)
                                                                                                                                       gggcgccc‑gccGGCCCGCTCCGTTGCATCGGCGCGGCGCGGCGCCCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGAttt                  <  2:7931463/148‑1 (MQ=255)
                                                                                                                                         tCGCGC‑GCCGGCCCGCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTcc                >  1:10289277/1‑151 (MQ=255)
                                                                                                                                           gggc‑gcCGCCCCGCTCGTGTGCATAGGCGCGCAGCGGCCCCCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTg              <  1:9612702/149‑1 (MQ=255)
                                                                                                                                           ggcc‑gcCTGCCCGCTCCGTTGCATAGGTGTGGAGGGGCCGGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTg              <  2:739705/148‑1 (MQ=255)
                                                                                                                                              c‑gcCGGCCCGCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCac           >  1:4052485/1‑150 (MQ=255)
                                                                                                                                               cccccgcccgcccCGTTCCATCGGCGCGGCGCGGCCCCCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCaa           <  1:10483812/146‑1 (MQ=255)
                                                                                                                                                gcCGGCCCGCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAAc          >  2:2971314/1‑151 (MQ=255)
                                                                                                                                                  cGGCCCGCTCCGTTGCATGGGAGCGGTGCGGCGCCCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTg        <  1:7665552/151‑1 (MQ=255)
                                                                                                                                                  cGGCCCGCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTg        >  2:2735344/1‑151 (MQ=255)
                                                                                                                                                  cGGCCCGCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTg        >  1:8595621/1‑151 (MQ=255)
                                                                                                                                                   ggCCCGCTCGGTTCCTTGGGCGGGGCCCGCCCCCCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTgc       <  1:4505097/151‑1 (MQ=255)
                                                                                                                                                    gCCCGCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTgcg      >  2:4332946/1‑151 (MQ=255)
                                                                                                                                                     ccccCTCGGTTGCATTGTTGCGGATCGGCGCCCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTgcgc     <  2:1833678/151‑1 (MQ=255)
                                                                                                                                                       cGCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCa   >  1:9771461/1‑151 (MQ=255)
                                                                                                                                                        gCTCCGTTGCATTGGTGGGGCGCGGCCCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCAg  <  1:7097270/151‑1 (MQ=255)
                                                                                                                                                        gCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCAg  >  1:8023213/1‑151 (MQ=255)
                                                                                                                                                        gCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCAg  >  1:4970313/1‑151 (MQ=255)
                                                                                                                                                        gCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCAg  >  1:3480643/1‑151 (MQ=255)
                                                                                                                                                        gCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCAg  >  1:10843940/1‑151 (MQ=255)
                                                                                                                                                        gCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCAg  >  1:10376575/1‑151 (MQ=255)
                                                                                                                                                        gCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTAAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCAg  >  1:1140685/1‑151 (MQ=255)
                                                                                                                                                        |                                                                                                                                                           
ATCCGAAAACGCCGCAGGAGTCACCGTAAAGGCTGCAAAGTTTATACGCCTCGGCAAGGCCGCACAATGAGCAACTAGGCAAGCAAAATCAAAGGTTTGCCGATAGCCGAGGCTCCTTGCCCA‑GAGCATCGGCCGGTCGCGC‑GCCGGCCCGCTCCGTTGCATAGGAGCGGATCGGCGCGCCGACTC‑ACTGCC‑AGC‑GG‑AAATTCAGTTGGGACGACG‑ACGGCACCGCCGCGCTGGGCGCTGCGGGCTGGCCGGAGGCATCCAGCGGTACGCTGTCGGCCGGGATTTCCTGCAACTGCGCCAG  >  NC_008463/4616298‑4616598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑