| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,341,611 | Δ1 bp | pseudogene (571/957 nt) | PA14_RS10890 → | DUF58 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,341,609 | 0 | C | . | 99.7% | 1918.3 / ‑2.0 | 389 | pseudogene (569/957 nt) | PA14_RS10890 | DUF58 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base . (190/198); total (190/199) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 410 total aligned reads displayed.
CTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCA > NC_008463/2341458‑2341756 | tgctgTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGcc < 1:1815579/151‑1 (MQ=255) gctgTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGccg > 1:9685397/1‑150 (MQ=255) gctgTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGccg < 2:9497139/151‑2 (MQ=255) tgTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGccgtt > 2:11149066/1‑148 (MQ=255) gTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGGGGCCGGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGTGccgttc > 1:1556205/1‑147 (MQ=255) ttCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTcc < 1:2699092/151‑1 (MQ=255) aCCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTcgc > 2:5601927/1‑151 (MQ=255) gaccgaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCg > 2:7667018/1‑151 (MQ=255) gaccgaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCGGCG‑CCAGCAGGCGCTGGTCTACCCGCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCg > 2:4249705/1‑151 (MQ=255) ccgaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGGTCCTCGCGCCggg > 2:831377/1‑151 (MQ=255) cgaGCGCCGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCAGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGgc < 1:4017386/151‑1 (MQ=255) cgaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCGGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGgc > 2:9104876/1‑151 (MQ=255) gaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGgcg > 1:3491696/1‑151 (MQ=255) gaGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGgcg > 2:3407000/1‑151 (MQ=255) cgcgGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTACCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCggagg > 1:10651008/1‑151 (MQ=255) gcgGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCggagga < 1:4705351/151‑1 (MQ=255) ggctggctGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATg > 1:1450643/1‑151 (MQ=255) ggctggctGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATg > 2:1675064/1‑151 (MQ=255) ggctggctGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCGGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATg > 1:9038330/1‑151 (MQ=255) tggctgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCg < 1:7515123/151‑1 (MQ=255) cggctgCGGCCGGGGCGCCAGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCg < 1:5704299/150‑1 (MQ=255) ggctgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑GCGTTCCTCGCGCCGGGCGCGGAGGATGCCGa > 2:10789499/1‑151 (MQ=255) ggctgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCACGCGCCGGGCGCGGAGGATGCCGa > 1:8126644/1‑151 (MQ=255) gctgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAg < 2:6359107/151‑1 (MQ=255) ctgCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTGCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAgg < 1:2376815/151‑1 (MQ=255) cGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAggg > 2:5911375/1‑151 (MQ=255) cGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCAGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAggg > 2:8890406/1‑151 (MQ=255) cGGGGCGCCTGCGGGTGGAGAGTCGCTTGCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGTGCTGCG‑CCAGCAGGCGCTGGTCTACCCGCGGCCGCTGGCCGGCGAG‑CCGTTGCTCGCGCCGGGCGCGGAGGATGCCGGGGACCAggg > 1:629236/1‑151 (MQ=255) gcgcCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGgcgc < 1:9514553/151‑1 (MQ=255) gcCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGgcgcgc < 1:1078334/151‑1 (MQ=255) cTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCGGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCACGGCCGCTGGCCGGCGAG‑CCGTTCCACGCGCCGGGCGCGGAGGGTGCCGAGGACCAGGGgcgcgcgc > 1:3574620/1‑151 (MQ=255) gCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTg < 1:8559327/151‑1 (MQ=255) gTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGa > 1:3383825/1‑151 (MQ=255) ggAGAGTCGCTGTCCCCTCGGCCTGCTGGGGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGc < 1:8872362/151‑1 (MQ=255) agagTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCAc < 1:9141500/151‑1 (MQ=255) agagTCGCTTTCCCCTCGGCCTGCTGGTGGCCGGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCAc > 2:7084949/1‑151 (MQ=255) agTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACgg < 1:10428628/151‑1 (MQ=255) tCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCCGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGc < 2:3901580/151‑1 (MQ=255) gCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGt > 1:6204743/1‑151 (MQ=255) cTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTc < 2:3230616/151‑1 (MQ=255) ttCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTcga > 2:8742964/1‑151 (MQ=255) ccccTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTcgacg < 2:370302/151‑1 (MQ=255) cccTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCGGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGCGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGGcgacga > 1:2473024/1‑151 (MQ=255) cccTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGTGCACGGGCGTcgacga > 2:1861748/1‑151 (MQ=255) cccTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTcgacga > 1:4990264/1‑151 (MQ=255) ccTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCgacgac > 2:249719/1‑151 (MQ=255) tCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTa < 1:4308011/151‑1 (MQ=255) cGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTAc < 2:9680358/151‑1 (MQ=255) gCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTACTCGCGCCGGGCGCGGAGGATGCCGAGGACCTGGGGCGCGCGCTGGCGTGCTCGGGCGTCGACGACTACCa > 1:4875279/1‑151 (MQ=255) ctgctgGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAgg > 1:7176094/1‑151 (MQ=255) tgctgGTGGCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAggg > 2:7569439/1‑151 (MQ=255) tgctgGTGGCCTGGAGCTGGGACGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCGGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCCGAGGATGCCGAGGACCAGGGGATCGCGCTGGCGAGCACGGGCGTCGACGACTACCAggg > 2:4764231/1‑151 (MQ=255) gtggCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTgc < 1:9834977/151‑1 (MQ=255) tggCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTgcg < 2:1472972/151‑1 (MQ=255) ggCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTgcgc < 1:7873252/151‑1 (MQ=255) ggCCTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTAACAGGGACTgcgc > 1:5975344/1‑151 (MQ=255) cTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGcc < 2:6155547/151‑1 (MQ=255) cTGGAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGcc > 1:6884723/1‑151 (MQ=255) ggAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTa < 2:3077592/151‑1 (MQ=255) gAGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAc < 2:809744/151‑1 (MQ=255) aGCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCGGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAcc < 2:2906061/151‑1 (MQ=255) gCTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAcca < 2:7360142/151‑2 (MQ=255) cTGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccag < 1:4466323/151‑3 (MQ=255) tGGGTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccagc < 2:2183600/151‑4 (MQ=255) gggTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTAccagcc < 1:7130461/151‑5 (MQ=255) ggTCGACCTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCg < 2:5225348/151‑1 (MQ=255) cTGCG‑CCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACt < 1:9585381/151‑1 (MQ=255) cagcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCC‑TTCCTCGCGCCGGGCGCGCAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACGACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggc < 1:1148062/151‑1 (MQ=255) cagcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggc < 2:4947143/151‑1 (MQ=255) cagcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggc > 2:9907622/1‑151 (MQ=255) agcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcg > 2:10084076/1‑151 (MQ=255) gcagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcgg > 1:2230467/1‑151 (MQ=255) cagGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcggc < 1:7084949/151‑1 (MQ=255) agGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCgcggcggcg > 2:10153989/1‑151 (MQ=255) ggCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGgcgc > 2:2799988/1‑151 (MQ=255) gcTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTg < 2:6955272/151‑1 (MQ=255) cTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGGGCACGGCCCTCGCCGACTACCACGGCCTGCGCGCCT‑CCCCGCGGCGCGAGTCGCGGCGGCGCCTGc > 2:9567222/1‑151 (MQ=255) cTGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGc < 1:6525183/151‑1 (MQ=255) tGGTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCa > 1:7926585/1‑151 (MQ=255) ggTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCAc < 1:8938248/151‑1 (MQ=255) ggTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCAc < 1:2609668/151‑1 (MQ=255) gTCTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACt < 2:3467992/151‑1 (MQ=255) cTACCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTgg < 1:1990137/151‑1 (MQ=255) aCCCTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGaa < 2:383521/151‑1 (MQ=255) ccTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAgg > 1:10125479/1‑151 (MQ=255) cTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGc < 1:6487922/151‑1 (MQ=255) cTCGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGc > 2:7852028/1‑151 (MQ=255) cGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGt < 1:5346426/151‑1 (MQ=255) cGGCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGt < 1:8089972/151‑1 (MQ=255) gCCGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGttt > 1:2826414/1‑151 (MQ=255) ccGCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGtttt > 1:2946134/1‑151 (MQ=255) gCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTcc < 1:5778364/151‑1 (MQ=255) gCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTcc > 1:4596511/1‑151 (MQ=255) gCTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTcc > 2:10349526/1‑151 (MQ=255) cTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTccc < 1:1000543/151‑1 (MQ=255) cTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTccc > 2:9341171/1‑151 (MQ=255) cTGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACGGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTccc > 1:3823907/1‑151 (MQ=255) tGGCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCg > 2:2076445/1‑151 (MQ=255) ggCCGGCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGt < 2:2424862/151‑1 (MQ=255) gCGAG‑CCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTA‑CCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCa < 1:7410287/151‑1 (MQ=255) | CTGCTGTTCCACCCGACCGAGCGACGCGGCTGGCTGCGGCCGGGGCGCCTGCGGGTGGAGAGTCGCTTTCCCCTCGGCCTGCTGGTGGCCTGGAGCTGGGTCGACCTGCGCCCAGCAGGCGCTGGTCTACCCTCGGCCGCTGGCCGGCGAGCCCGTTCCTCGCGCCGGGCGCGGAGGATGCCGAGGACCAGGGGCGCGCGCTGGCGAGCACGGGCGTCGACGACTACCAGGGACTGCGCGCCTACCCAGCCGGGCGACTCGCGGCGGCGCCTGCACTGGAAGGCGTTTTCCCGTGGCCA > NC_008463/2341458‑2341756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |