| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,617,223 | Δ1 bp | coding (288/369 nt) | clpS → | ATP‑dependent Clp protease adapter ClpS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,617,222 | 0 | C | . | 99.7% | 1762.2 / ‑2.4 | 357 | coding (287/369 nt) | clpS | ATP‑dependent Clp protease adapter ClpS |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (181/175); minor base G (0/1); total (181/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 367 total aligned reads displayed.
TACTGTTCAACGACGATTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGGCCGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTCGAAGTCACCCTCAATCTCG > NC_008463/2617072‑2617368 | aCTGTTCAACGACGATTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGGcg < 1:7160880/151‑2 (MQ=255) cTGTTCAACGACGATTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGGcga > 1:8021303/1‑149 (MQ=255) cTGTTCAACGACGATTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGGcga < 1:9474603/151‑3 (MQ=255) aaCGACGATTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCaa < 2:4730264/151‑1 (MQ=255) aaCGACGATTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCaa < 2:10235856/151‑1 (MQ=255) aaCGACGATTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCaa < 2:10239799/151‑1 (MQ=255) acgacgATTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAg < 2:8980118/151‑1 (MQ=255) cgacgaTTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAgg < 1:8362495/151‑1 (MQ=255) cgaTTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGa > 1:7704449/1‑151 (MQ=255) cgaTTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGa > 1:1146679/1‑151 (MQ=255) gaTTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGAt > 1:494036/1‑151 (MQ=255) tACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCa < 1:5977933/151‑1 (MQ=255) cacGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAgg > 1:2151404/1‑151 (MQ=255) cGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTc < 1:9914609/151‑1 (MQ=255) cGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAAt < 2:3703128/151‑1 (MQ=255) aTGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCa > 2:10002754/1‑151 (MQ=255) tGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAg < 1:3927456/151‑1 (MQ=255) gACTGTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTa < 2:10835528/151‑1 (MQ=255) aCTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTAt < 1:4591149/151‑1 (MQ=255) tttGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGc > 2:6155828/1‑151 (MQ=255) ttgttgttgAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCTGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCa < 1:4436262/151‑1 (MQ=255) ttgttgAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACgg > 1:2660866/1‑151 (MQ=255) ttgttgAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACgg < 2:8563155/151‑1 (MQ=255) ttgAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGgag > 1:1427781/1‑151 (MQ=255) tgAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGgaga > 1:10311519/1‑151 (MQ=255) gAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGagag > 2:6761258/1‑151 (MQ=255) gTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCa < 2:1628176/151‑1 (MQ=255) gTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCa < 2:7268243/151‑1 (MQ=255) tGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAg < 1:4142839/151‑1 (MQ=255) gCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGc < 2:972661/151‑1 (MQ=255) cTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCa > 1:2344902/1‑151 (MQ=255) aaGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGAAAGGCGGTCTGCTGCATGTTAACCCGGTACGTGG‑CGAAACCAAGGCTATGCAGGTCAATCAGTATGAACGGGAGAGACAGCATCCa > 2:4843875/1‑151 (MQ=255) gtgtTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCAtt > 1:6884422/1‑151 (MQ=255) gtgtTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCAtt < 1:1582216/151‑1 (MQ=255) tcttcAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTAGCCGGGACGTGG‑CGAAACCTAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGctc > 2:6247269/1‑151 (MQ=255) tcttcAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGAGGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGctc < 2:5839129/151‑1 (MQ=255) cttcAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGctct > 1:3132488/1‑151 (MQ=255) cttcAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGctct > 1:2831987/1‑151 (MQ=255) cttcAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGctct > 2:3676163/1‑151 (MQ=255) ttcAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTg > 2:6929585/1‑151 (MQ=255) tcAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGc > 1:1852827/1‑151 (MQ=255) tcAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGc > 2:2728645/1‑151 (MQ=255) tcAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCAAGCATCCATTGCTCTGc > 2:3953476/1‑151 (MQ=255) aCATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCgag > 2:882181/1‑151 (MQ=255) aCATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCgag < 2:6473899/151‑1 (MQ=255) tGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATa > 2:5331959/1‑151 (MQ=255) tGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACACGGGACGTGG‑CGAAACCAAGGCGAAGCAGCTCAATCAGAAAGACCGGGAGAGACAGCATCAATTGCTCTGCgagaaa > 2:318393/1‑149 (MQ=255) ggACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATag > 1:6398389/1‑151 (MQ=255) ggACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATag > 1:9306219/1‑151 (MQ=255) ggACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATag > 1:9306046/1‑151 (MQ=255) gACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATaga < 2:4189012/151‑1 (MQ=255) aCCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATagag > 1:7424685/1‑151 (MQ=255) ccGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAgaga > 1:9628577/1‑151 (MQ=255) cGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGaa > 1:1989696/1‑151 (MQ=255) aaaaaGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGAc > 1:708759/1‑151 (MQ=255) aaaaGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACa > 2:4352686/1‑151 (MQ=255) aaaGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAg > 2:7976356/1‑151 (MQ=255) aaGCCACCAATATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTGACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGt < 2:5221163/151‑1 (MQ=255) aaGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGt < 2:11054169/151‑1 (MQ=255) aGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGtt > 1:3670797/1‑151 (MQ=255) caccaAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGAt < 1:2974334/151‑1 (MQ=255) caccaAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGAt < 1:8887282/151‑1 (MQ=255) accaAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATc < 1:974372/151‑1 (MQ=255) accaAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATc < 1:9806698/151‑1 (MQ=255) ccaAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCg < 2:10619591/151‑1 (MQ=255) caAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCgg < 2:2250582/151‑1 (MQ=255) aaGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGTAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGTAAGACAGTTGATCggg > 2:2456788/1‑150 (MQ=255) aGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGACAGACAGTTGATCGGAt > 2:5588780/1‑151 (MQ=255) aGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGAt < 1:4670712/151‑1 (MQ=255) aTCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGt < 1:6934609/151‑1 (MQ=255) cATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGttt < 2:5312532/151‑1 (MQ=255) aTGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATCGAGAAAGACAGTTGATCGGATGTTTg > 2:3437068/1‑151 (MQ=255) gTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCCAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTggg < 2:3039984/151‑1 (MQ=255) gTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTggg < 1:3344590/151‑1 (MQ=255) ttGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGa < 1:851280/151‑1 (MQ=255) tGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAg > 2:1950757/1‑151 (MQ=255) gACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGc < 2:5655754/151‑1 (MQ=255) aCGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCg > 1:10725854/1‑151 (MQ=255) aCGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCg > 1:10873556/1‑151 (MQ=255) ggTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAg > 1:8777936/1‑151 (MQ=255) aCATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTg < 2:7570465/151‑1 (MQ=255) cTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGcc < 1:4213472/151‑1 (MQ=255) gggTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGt < 1:5281658/151‑1 (MQ=255) gCGGTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCg < 1:1257365/151‑1 (MQ=255) gTCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCgaga > 1:2399914/1‑151 (MQ=255) tCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGagag < 2:9628577/151‑1 (MQ=255) tCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGagag > 1:996827/1‑151 (MQ=255) tCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGagag > 1:5584040/1‑151 (MQ=255) tCTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGagag > 2:9151240/1‑151 (MQ=255) cTGCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGc > 1:9021687/1‑151 (MQ=255) gCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTc < 1:6526053/151‑1 (MQ=255) gCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTc < 2:7870143/151‑1 (MQ=255) gCGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTc < 2:7155874/151‑1 (MQ=255) cGGCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTCg < 2:4930904/151‑1 (MQ=255) gCTTGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTCGaa > 1:10105622/1‑151 (MQ=255) tGTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTCGAAGTc > 1:7634465/1‑151 (MQ=255) gTTTACCCGGGACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTCGAAGTCa < 2:5463538/151‑1 (MQ=255) gggACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTCGAAGTCACCCTCAAt > 1:11089277/1‑151 (MQ=255) gACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTCGAAGTCACCCTCAAtct < 2:1427781/151‑1 (MQ=255) gACGTGG‑CGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTCGAAGTCACCCTCAAtct > 2:1271510/1‑151 (MQ=255) | TACTGTTCAACGACGATTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCTTCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGGCCGAAACCAAGGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCCATGTTGAATCGAGAGCTCGAAGTCACCCTCAATCTCG > NC_008463/2617072‑2617368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |