Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 2,621,464 | 0 | A | T | 25.4% | 1007.9 / 86.7 | 476 | intergenic (‑9/+29) | aat/trxB | leucyl/phenylalanyl‑tRNA‑‑protein transferase/thioredoxin‑disulfide reductase |
Reads supporting (aligned to +/- strand): ref base A (257/67); new base T (0/110); total (259/217) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 0.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 487 total aligned reads displayed.
AGGGGAAGCAGCCGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGCGAACACGCCTTCGATGC > NC_008463/2621314‑2621614 | aGGGGAAGCAGCCGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑Ta > 2:9932087/1‑151 (MQ=255) ggggAAGCAGCCGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAg > 2:3239473/1‑151 (MQ=255) ggggAAGCAGCCGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAg < 2:9468900/151‑1 (MQ=255) ggggAAGCAGCCGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAg < 2:8142797/151‑1 (MQ=255) agcagcCGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAg > 1:10980684/1‑151 (MQ=255) agcCGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAgggc > 2:5073353/1‑151 (MQ=255) agcCGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAgggc < 2:587446/151‑1 (MQ=255) agcCGTGGCGATAGGCTGCGACCAGGCGTTGCGGAGTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAgggc > 2:8870702/1‑151 (MQ=255) ccGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAgggcgg < 2:9284945/151‑1 (MQ=255) ccGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAgggcgg > 1:5411649/1‑151 (MQ=255) cGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAgggcggg > 2:341756/1‑151 (MQ=255) gTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAgggcgggc > 2:7191838/1‑151 (MQ=255) gTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAgggcgggc > 2:534584/1‑151 (MQ=255) gCGATTGGATGCGACCTGGCGTTGCGGTTTGTGGTCGCCTCCGGCCGCGAGCTGCCGGTTGGGCTCCTGCTGGGCCTTGTCGTGGGGCGTAATGTCGATGTCGGTGCGGGAAAGCCAGGTCAGCTGGGGGGGG‑TTGGGGAGGGCGGGCCTc < 2:461971/151‑1 (MQ=255) tAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTccccc > 2:9534195/1‑151 (MQ=255) ggCTGCGACCTGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTGGGGCTCCTGCCGGGCCTTGTCGTGGGGCGTAAAGTCGACGTCGGTGCGGTAATGCCAGGTCTGCATGGCGGGG‑TTGGGGTGGGCGGGCCTCCCCCgg < 2:3098648/151‑1 (MQ=255) ggCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCgg > 1:7034199/1‑151 (MQ=255) ggCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCgg > 1:6062785/1‑151 (MQ=255) gCTGCGACCAGGCTTTGCGGTTTGAGGGCGCCCCCGGCCGCGAGCAGCCCGTTGGGCCCCGGCCGGGCCTGGTCGTGGGGGGTAAAGGCCACGACGGGGCGGTAAAGCCTGTTCAGCATGGCGGGG‑TTGGGGCGGGCGGCCCTCCCCCggg < 2:350089/151‑1 (MQ=255) gCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCCGGTCAGCAGGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCggg > 1:4037431/1‑151 (MQ=255) cTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGt > 1:4372136/1‑151 (MQ=255) cGACCAGGCGTGGCGGATTGAGGGCGCCACCGCCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCGTGTCGCGGGGCGGAACGTCGAAGTCGGTGCGGGAAAGCCAGGTCCGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCg < 2:10405125/151‑1 (MQ=255) gACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGa > 1:807493/1‑151 (MQ=255) ctggCGTTGGGGTTTGTGGTCGCCCCCGGCCGGGCGCAGCCCGTTGGGCTCCTGCTGGGCCTTGTCGTGGGGCGTAATGTCGATGTGGGGGCGGGAATGCCTGGTCAGCATGGGGGGT‑TTGGGGAGGGGGGGCCTCCCCCGGGTCCGATCa < 2:8937586/149‑1 (MQ=255) aGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCaa > 1:55204/1‑151 (MQ=255) gcgttgcgttTTGAGGGCGCCTCCGGCCGCGCGCAGCCCGTGGGGCTCCTGCTGGGCCTTGTCGCGGGGCGTAATGTCGATGTCGGTGCGGGAAAGCCAGGTCAGCTTGGGGGGG‑TTGGGGTGGGCGGGCCTCCCCCGGGTCCGATCAATg < 2:6026580/151‑1 (MQ=255) gCGTTGGGGTTTGCGGTCGCCGCCGGCCGCGCGCAGCCGGTGGGGCCCCGGCTGGGCCTGGTCGGGGGGCGGAAAGTGGATGGCGGTGCGGGAAAGCCCGGCCACCTGGGGGGGG‑TTGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATg < 2:1895310/151‑1 (MQ=255) cGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATgg > 1:8285480/1‑151 (MQ=255) ttGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGgtc > 2:279648/1‑151 (MQ=255) cGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGgtcgtc > 2:11006323/1‑151 (MQ=255) cGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGgtcgtc > 2:5541717/1‑151 (MQ=255) gATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGa > 1:9406687/1‑151 (MQ=255) gATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGa > 2:7613278/1‑151 (MQ=255) ttGTGGTCGCCGCGGGCCGCGCGCCGCCCGTTGGGCACCTGCTGGGCTTTGTCGCGGGGGGTAAAGGCGAAGTGGGGGGGGTAAAGCCAGGTCAGCTTGGGGGGG‑TTGGGGTGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAgg < 2:9866029/151‑1 (MQ=255) ttGAGGTGGCCGCCGGCCGCGAGAAGCCCTTTGGGATCGTGCCGGGCCTTGTCGTGGGGCGTAAAGTCGACGTCGGTGCGGGAAAGCCTGGTCAGCTGGGGGGGG‑TTGGGGAGGGGGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAgg < 2:4887763/151‑1 (MQ=255) ttGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAgg > 2:8449067/1‑151 (MQ=255) tGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGt > 2:2658827/1‑151 (MQ=255) tGAGGGCGCCTCCGCCCGGGAGCTGCCCGTTGGGCACCTGCTGGGCCTTGTGGTGGGGGGGAATGTCGAAGTCGGTGGGGTAAAGCCTGGTCAGAATGGGGGGG‑TCGGGGTGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGt < 1:3017527/151‑1 (MQ=255) taGGTCCCCTCCGGCCGCTACCAGCCCTTTGGGCTCCTGCTGGGCATTTACTTGGGGGGTAATCTCCATGTGGTTGCGGGAACGCCTGGTCACCATGGGGGGT‑TAGGGGTGGGGGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTa < 1:2218560/150‑1 (MQ=255) aGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTAt > 2:4042243/1‑151 (MQ=255) tCGCCGCCGGCCGCGAGCAGCCCGTTGGGATCCGGCTGGGCCTGGTCGAGGGGGGGAATGACGATGTGGGTGGGGTAAACCCAGGTCAGCATGGCGGGG‑TGGGGGTGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTAtttt < 1:2709369/151‑1 (MQ=255) cGCCTCCGGCCGCGCGCAGCCCGTTGGGCTCCTGCTGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCTGGTCAGCATGGCGGGG‑TTGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTAttttt < 2:3875306/151‑1 (MQ=255) gCCTCGGGCCGCGAGCTGCCGGTTGGGCTCCTGCTGGGCCTTGTGGTGGGGGGGAATGTCGAAGTGGGGGCGGTAAAGCAGGTTCCGCTTGGCGGGG‑TCGGGGTGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTc < 1:5910152/151‑1 (MQ=255) gCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTc > 2:10889942/1‑151 (MQ=255) ccTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCg > 1:2885626/1‑151 (MQ=255) ccTCCGGCCGCGAGCAGCCCGTGGGGCGCCTGCTGGGCATTGTCGAGGGGCGTACAGTCGACGTGGGTGGGGTAAAGCCAGGTCCGCTTGGCGGGT‑TTGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCg < 2:9046223/151‑1 (MQ=255) cccgggCCGCGCGCCGCCGTTTGGGCCCCTGCTGGGCCTGGTCGGGGGGGGTAATGTCGAGGTGGGGGGGGTAAAGCCTGGCCCGATGGGGGGGG‑TGGGGGTGGGGGGGCCTCCCCAGGGTCCGATCAATGGTCGTCGAGGTATTTTTCgg < 1:5727632/147‑1 (MQ=255) cccgggCCGCGAGCTGCCGGTGGGGCTCGTGCTGGGCGTTTTCGGGGGGGGTAATTTCGATGTGGGTGCGGTAACGCCTGTTCTCCTTGGGGGGG‑TAGGGGGGGGGGGCCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCgg < 1:2571426/147‑1 (MQ=255) accGGCCGCGCGCAGCCCTTGGGGCTCCTGCAGGGCATTGTCGTGGGGCGGAATGTGGAAGTCGGTGCGGTAAAGCCTGGTCAGCTTGGCGGGG‑TTGGGTAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGc < 2:6498885/150‑1 (MQ=255) gcgAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAgc > 1:7882767/1‑151 (MQ=255) cgcagcCCGTTGGGCTCCTGCTGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCCGGACAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGcgcg < 2:7441196/150‑1 (MQ=255) agcagcCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGcgcg > 1:6814872/1‑151 (MQ=255) ctgcCCGTTGGGCTCCTGCTGGGCCTGGTCGAGGGGCGGAACGTCGAAGGCGGTGCGGTAAAGCCCGGTAAGCATGGGGGGG‑TTGGGGTGGGGGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGc < 2:8698016/149‑1 (MQ=255) agcCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGcc > 1:9637627/1‑151 (MQ=255) ccggTTGGGCGCGTGCAGGGCCTTGTCGAGGGGGGTAAAGTCGATGTCGGTGCGGTAAAGCCCGTTCAGCATGGCGGGG‑TTGGGGTGGGGGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCAt < 2:7732610/148‑1 (MQ=255) ccGTGGGGCTCCGGCTGGGCTTTGTCGTGGGGGGTATATGCTATGTCGGTGCGGTAAAGCATGGACACCTTGGGGGGG‑TGGGGGTGGGGGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATg < 2:1413415/151‑1 (MQ=255) tGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGAATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAgc > 2:1110743/1‑151 (MQ=255) gggCTCCTGCAGGGCGTTGTCGCGGGGCGCAAAGTCGAAGTCGGTGCGGGAATGCCAGGTCACCTTGGCGGGG‑TAGGGGAGGGCGGCCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAgcc < 2:10302303/151‑1 (MQ=255) cTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAgccggc > 1:4802589/1‑151 (MQ=255) cAGGTCCTTGTCGAGGGGCGTAAAGTCGAAGTCGGTGCGGGAACGCAAGTTCCCCTTGGCGGGT‑TCGGGGCGGGGGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAgccggcgccggc < 2:6903644/151‑1 (MQ=255) cAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAgccggcgccggc > 1:8804454/1‑151 (MQ=255) aGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGccggcgccggcg > 2:5784132/1‑151 (MQ=255) ctggTCGTGGGGCGGAAAGTCGATGTCGGGGCGGGAACCCCAGGTCAGCAGGGCGGGG‑TTGGGGTGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGt < 1:10153774/148‑1 (MQ=255) ttGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGACGTg > 1:7567749/1‑151 (MQ=255) tggTCGTGGGGGGTAATTTCTAAGTGGGGGCGGTAAAGCCTGGTCAGCTTGGGGGGG‑TTGGGGTGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTg < 1:7490812/149‑1 (MQ=255) tGTCGCGGGGCGGAATGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGGGGGG‑TTGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGa < 2:6559757/151‑1 (MQ=255) gTCGTGGGGCGTAATGTCGATGTGGGTGGGGTAATGCCTGGACTGCTTGGGGGGT‑TTGGGGTGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGAt < 1:3643848/151‑1 (MQ=255) gTCGCGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCTGGACACCATGGGGGGT‑TTGGGGCGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGAt < 1:8510235/151‑1 (MQ=255) tCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATg > 1:8595041/1‑151 (MQ=255) gCGGAAAGTCGATGTCGGTGCGGTAAAGCCTGGTCAGCATGGGGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGc < 2:3630023/151‑1 (MQ=255) cGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCg > 1:9122437/1‑151 (MQ=255) gAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGt > 1:10347255/1‑151 (MQ=255) tcgaagtcgGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACg > 2:2298750/1‑151 (MQ=255) cgatgtggGTGGGGGAACGCCAGGTCAGCATGGGGGGT‑TTGGGGAGGGGGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGt < 2:1542234/151‑1 (MQ=37) gaggtcgGGGGGGGAATGCCTGGTCGGCATGGCGGGG‑TTGGGGAGGGGGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTg < 2:6246386/148‑1 (MQ=37) atgtgggTGCGGTAACGCCTGGACTG‑ATGGGGGGGTTTGGGGGGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTgg < 1:8319682/146‑1 (MQ=25) aagtggGTGCGGTAAAGCCAGGCCAGCTGGGGGGGG‑TTGGGTTGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTgg < 2:1311188/151‑1 (MQ=37) cgGTGCGGGAAAGCCAGGCCACCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCgg < 1:3282076/151‑1 (MQ=255) tgggggAAAGCCAGGTCAGAATGGCGGGG‑TTGGGTAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCa < 2:8296199/148‑1 (MQ=255) tGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCa > 1:3473573/1‑151 (MQ=255) gggAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGt > 2:7681736/1‑151 (MQ=255) gggAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGt > 1:4574387/1‑151 (MQ=255) aGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCcg > 2:7046343/1‑151 (MQ=255) ccAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGAAGTGGTCGGCCACGTCGCcggc > 1:1978711/1‑151 (MQ=255) cAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCcggcg > 1:10847836/1‑151 (MQ=255) cAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCcggcg > 1:6352249/1‑151 (MQ=255) aGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCcggcgg > 2:6639373/1‑151 (MQ=255) aGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCcggcgg > 1:5157399/1‑151 (MQ=255) gTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGgcggcg > 2:10729588/1‑151 (MQ=255) aGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGCGAac > 1:9905076/1‑151 (MQ=255) aGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGGCGGCCACGTCGCCGGCGGCGAac > 2:9688418/1‑151 (MQ=255) gggggg‑TTGGGGTGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGCGAACACGCCt < 2:4374772/149‑1 (MQ=255) cGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGCGAACACGCCtt > 1:1114016/1‑151 (MQ=255) gggg‑tgggggtgGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGCGAACACGCCTTc < 1:6624910/151‑1 (MQ=255) gggg‑TTGGGGTGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGCGAACACGCCTTc < 2:5466171/151‑1 (MQ=255) gggg‑TTGGGGCGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGCGAACACGCCTTc < 2:11144410/151‑1 (MQ=255) gggg‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCCATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGCTGGCCTGGCGGGAGACGTGGTCGGCCACGTCGCCGGCGGCGAACACGCCTTc < 2:2092645/151‑1 (MQ=255) ggg‑TGGGGGGGGGGGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGCGAACACGCCTTCg < 1:10017/151‑1 (MQ=255) g‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCACTGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGCGAACACGCCTTCGAt > 2:7961733/1‑151 (MQ=255) g‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGCGAACACGCCTTCGAt > 1:131605/1‑151 (MQ=255) | AGGGGAAGCAGCCGTGGCGATAGGCTGCGACCAGGCGTTGCGGATTGAGGTCGCCTCCGGCCGCGAGCAGCCCGTTGGGCTCCTGCAGGGCCTTGTCGAGGGGCGGAAAGTCGAAGTCGGTGCGGGAAAGCCAGGTCAGCATGGCGGGG‑TAGGGGAGGGCGGGCCTCCCCCGGGTCCGATCAATGGTCGTCGAGGTATTTTTCGGCATCCAGCGCGGCCATGCAGCCGGCGCCGGCGGAAGTGATGGCCTGGCGGTAGACGTGGTCGGCCACGTCGCCGGCGGCGAACACGCCTTCGATGC > NC_008463/2621314‑2621614 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |