| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,787,877 | C→G | pseudogene (955/3090 nt) | PA14_RS13085 → | CusA/CzcA family heavy metal efflux RND transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,787,877 | 0 | C | G | 99.2% | 1403.8 / ‑6.2 | 353 | pseudogene (955/3090 nt) | PA14_RS13085 | CusA/CzcA family heavy metal efflux RND transporter |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base G (181/168); total (183/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 353 total aligned reads displayed.
TCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCC‑A‑GGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCA‑C‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACA > NC_008463/2787740‑2788024 | tCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTgaagaa < 1:10720349/151‑1 (MQ=255)tCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTgaagaa < 2:3384807/151‑1 (MQ=255) tGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTgaagaagaa < 2:2245035/151‑1 (MQ=255) cTGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAAcc > 2:10154424/1‑151 (MQ=255) tGATCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAAcct < 2:11145387/151‑2 (MQ=255) tCGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAAcctggt < 2:8096390/151‑5 (MQ=255) cGGCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCtggtg < 1:5985843/151‑1 (MQ=255) ggCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCtggtgg < 2:5141982/151‑1 (MQ=255) gCGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGa < 1:4116439/151‑1 (MQ=255) cGAGAACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGaa > 1:9889618/1‑151 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAg > 1:5490832/1‑151 (MQ=255) gagaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAg > 2:1891783/1‑151 (MQ=255) gaACAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAggc < 1:4187518/151‑1 (MQ=255) gaACAGCCGGGAAGGGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAggc < 2:8880931/151‑1 (MQ=255) aCAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAggcgc > 1:1363426/1‑151 (MQ=255) aCAGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAggcgc > 1:6936250/1‑151 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAggcgcgg < 2:5964352/151‑1 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAggcgcgg > 1:4788108/1‑151 (MQ=255) aGCCGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAggcgcgg > 1:5841011/1‑151 (MQ=255) cGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACCAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAggcgcggcgc > 2:529364/1‑151 (MQ=255) cGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAggcgcggcgc > 2:8768386/1‑151 (MQ=255) cGGGAAGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAggcgcggcgc > 2:3535069/1‑151 (MQ=255) aGTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTg > 1:7556230/1‑151 (MQ=255) gTGGCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGa > 1:4995286/1‑151 (MQ=255) gTGGCCCAGGCGGACGGCCAGCGCCTGGAGGAGATCAACCGGACCCAGCCC‑ACGGGGGTCACGGCGATCACCGTCTACGACCGCACCACCCAGCTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGa > 2:7052995/1‑151 (MQ=255) ggCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATc < 2:8450275/151‑1 (MQ=255) gCCCAGGCGGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATcg > 2:2269552/1‑151 (MQ=255) caggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCgg > 1:9079805/4‑151 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCACGGCGATCACCGTCTACGCCCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt < 2:4107744/149‑1 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACCAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt < 2:7455982/149‑1 (MQ=255) aggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGt < 1:2815661/149‑1 (MQ=255) ggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTg > 1:7178583/2‑151 (MQ=255) ggcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTG‑GTGGCCAAGGCCGTGGCCA‑CGGTGACGACGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTg < 2:3090388/150‑1 (MQ=255) gcgGTCGGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGc > 2:291091/1‑151 (MQ=255) cggCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTc > 2:1958173/3‑151 (MQ=255) ggCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTcc > 1:6279353/2‑151 (MQ=255) gCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCt < 1:8148473/151‑1 (MQ=255) cAGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGt > 1:9234820/1‑151 (MQ=255) aGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGtt > 2:7968287/1‑151 (MQ=255) aGCGCCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGtt < 1:5310710/151‑1 (MQ=255) gcCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCt > 1:33418/1‑151 (MQ=255) gcCTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCt < 1:8964015/151‑1 (MQ=255) cTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCg > 1:5093158/1‑151 (MQ=255) cTGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCg < 2:9247049/151‑1 (MQ=255) tGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCgg < 1:8453508/151‑1 (MQ=255) tGGAGGAGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCgg > 2:5473810/1‑151 (MQ=255) ggaggaGATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGc > 2:7845902/1‑151 (MQ=255) aggagATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCaa > 2:1099134/1‑151 (MQ=255) ggagATCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAAc > 2:6371135/1‑151 (MQ=255) gagaTCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACa < 1:1971604/151‑1 (MQ=255) gaTCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATc < 1:10623478/151‑1 (MQ=255) aTCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATcc < 1:8865281/151‑1 (MQ=255) aTCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATcc < 1:3980121/151‑1 (MQ=255) tCAACCGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcg < 2:4256577/151‑1 (MQ=255) ccGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCcgcgcg < 1:10100561/151‑1 (MQ=255) cGGACCCTGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcgg > 1:1165600/1‑151 (MQ=255) gACCCTGCCCAA‑GGTGGTCAAGGCTATCACCGTCTACGACCGCACCACCCGTTTTGTCAAGG‑CCGTGTCCACC‑GTGAAGAAGAA‑CCAGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCgcggcg < 2:4516404/151‑1 (MQ=255) tGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAt < 1:4480021/151‑1 (MQ=255) tGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAt > 1:1248905/1‑151 (MQ=255) tGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAt > 2:903275/1‑151 (MQ=255) tGCCCAA‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGAt < 1:9632231/151‑1 (MQ=255) cccaa‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCa < 2:6734689/147‑1 (MQ=255) cccaa‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCa < 2:2698670/147‑1 (MQ=255) cccaa‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCa > 2:6273253/5‑151 (MQ=255) ccaa‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGACGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCACCATCCGCGCGGCGCTGATCAc > 2:10328919/4‑151 (MQ=255) aa‑GGGGGTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCg > 1:8643739/2‑151 (MQ=255) gggggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCTCCGcc > 1:5744573/1‑151 (MQ=255) gggggTCAAGGCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGcc > 2:10828783/1‑151 (MQ=255) tcaaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCTCCGCCACcat < 2:1830777/146‑1 (MQ=255) caaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatc > 1:9450117/5‑151 (MQ=255) aaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatca < 2:9842303/148‑1 (MQ=255) aaggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatca < 1:6463270/148‑1 (MQ=255) aggCGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACcatcat < 2:8633633/149‑1 (MQ=255) cGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATccc < 1:10916388/151‑1 (MQ=255) cGATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATccc > 1:2218734/1‑151 (MQ=255) gATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCg < 2:3229028/151‑1 (MQ=255) gATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCg > 2:10405585/1‑151 (MQ=255) gATCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCg > 2:6875888/1‑151 (MQ=255) aTCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGc > 1:5244970/1‑151 (MQ=255) tCACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCt > 1:3810442/1‑151 (MQ=255) cACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTg < 2:2579878/151‑1 (MQ=255) cACCGTCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTg < 1:3552840/151‑1 (MQ=255) tCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGAt < 2:5435604/151‑1 (MQ=255) tCTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCACTTCCTGTTCCTCGGCAACATCCGCGCGGCGATGATCACAGCCACCATCATCCCGCTGTCGAt > 2:7288515/1‑151 (MQ=255) cTACGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATg > 1:8813815/1‑151 (MQ=255) aCGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCt < 2:9085585/151‑1 (MQ=255) cGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTg < 1:6218469/151‑1 (MQ=255) cGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTg < 2:3307737/151‑1 (MQ=255) cGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTg < 2:1577373/151‑1 (MQ=255) cGACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTg > 1:10243281/1‑151 (MQ=255) gACCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGt > 2:9390047/1‑151 (MQ=255) aCCGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGtt > 2:2381134/1‑151 (MQ=255) ccGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttc > 1:3923180/1‑151 (MQ=255) ccGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttc < 2:8304846/151‑1 (MQ=255) cGCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttca < 1:2021832/151‑1 (MQ=255) gCACCACCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttcac > 1:6997891/1‑151 (MQ=255) caccacCCTGGTGGACAAGG‑CCGTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGttcacc > 1:4726689/1‑151 (MQ=255) caaggccgTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTc > 1:4579388/8‑151 (MQ=255) caaggccgTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTc < 2:4669818/144‑1 (MQ=255) aaggccgTGGCCA‑CGGTGAAGAAGAA‑CCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCg > 2:6061485/7‑151 (MQ=255) | TCATGCTGATCGGCGAGAACAGCCGGGAAGTGGCCCACGCGGTCTGCCAGCGCCTGGAGGAGATCAACCGGACCCTGCCC‑A‑GGGGGTCACTGCGATCACCGTCTACGACCGCACCACCCTGCATGACTAGGACAGTGCCCA‑C‑GTGAAGAAGAACCCTGGTGGAAGGCGCGGCGCTGGTGATCGCGGTGCTCTTCCTGTTCCTCGGCAACATCCGCGCGGCGCTGATCACCGCCACCATCATCCCGCTGTCGATGCTGTTCACCTTCACCGGGATGGTCGGCAACA > NC_008463/2787740‑2788024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |