Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 966,217 T→C intergenic (+77/‑568) PA14_RS04485 → / → PA14_RS04490 fimbrial protein/response regulator transcription factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_008463966,2170TC100.0% 1752.2 / NA 441intergenic (+77/‑568)PA14_RS04485/PA14_RS04490fimbrial protein/response regulator transcription factor
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (203/238);  total (203/238)

Only 100 of 444 total aligned reads displayed.

ATCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTTGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAGG  >  NC_008463/966069‑966364
                                                                                                                                                    |                                                                                                                                                   
 tCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCGCGGGAAGCGCCGTCGGCCGCTGTCGCGCCAGCCCTcgcg                                                                                                                                                  >  2:6674695/1‑151 (MQ=255)
   ggCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGaa                                                                                                                                                >  1:8677437/1‑151 (MQ=255)
    gcgcGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAg                                                                                                                                               <  1:10271152/151‑1 (MQ=255)
      gcgGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGc                                                                                                                                             >  1:9604960/1‑151 (MQ=255)
         gAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCg                                                                                                                                          <  2:2448443/151‑1 (MQ=255)
         gAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAACCCTCGCGAAGGCTCg                                                                                                                                          <  2:781163/151‑1 (MQ=255)
          aGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCgg                                                                                                                                         >  1:10143403/1‑151 (MQ=255)
          aGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCACCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCgg                                                                                                                                         >  1:8871986/1‑151 (MQ=255)
           gggCGACTTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGc                                                                                                                                        <  2:1468942/151‑1 (MQ=255)
           gggCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGc                                                                                                                                        >  1:10981355/1‑151 (MQ=255)
            ggCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGcc                                                                                                                                       >  1:3387231/1‑151 (MQ=255)
                       ggCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCa                                                                                                                            <  1:6855431/151‑1 (MQ=255)
                          cGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTGTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCGGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCGCTCCTCCAGTg                                                                                                                         >  2:8297629/1‑151 (MQ=255)
                           ggggTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTgg                                                                                                                        >  2:4338332/1‑151 (MQ=255)
                              gTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTg                                                                                                                     >  2:10057465/1‑151 (MQ=255)
                                 gCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAg                                                                                                                  <  2:3430451/151‑1 (MQ=255)
                                 gCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAg                                                                                                                  >  2:3369119/1‑151 (MQ=255)
                                    gACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATc                                                                                                               <  2:10558303/151‑1 (MQ=255)
                                    gACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGGTGCAGATc                                                                                                               >  2:5839206/1‑151 (MQ=255)
                                       ggCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGcc                                                                                                            <  1:10457933/151‑1 (MQ=255)
                                        gcgcCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCg                                                                                                           <  1:9366967/151‑1 (MQ=255)
                                        gcgcCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCg                                                                                                           <  2:4934334/151‑1 (MQ=255)
                                        gcgcCGCCGAGTTCACGTTTACCTTCCCCGGAGCGGCGCCGCCGCTCTTTCCCCGGCGTGTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCg                                                                                                           <  2:9069209/151‑1 (MQ=255)
                                           ccgccgAGTTCACGTTTCCCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAg                                                                                                        <  2:6776223/151‑1 (MQ=255)
                                           ccgccgAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAg                                                                                                        <  1:7564640/151‑1 (MQ=255)
                                              ccgAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGgcg                                                                                                     <  1:6070/151‑1 (MQ=255)
                                              ccgAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGgcg                                                                                                     <  1:4471531/151‑1 (MQ=255)
                                              ccgAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGgcg                                                                                                     <  2:8980069/151‑1 (MQ=255)
                                              ccgAGGTCACGTTTCCCTGCCCCTGAGCGGCGCCGCCGCTCTTGCCCCGGCGTTGCCCGCCCCGCCGCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGgcg                                                                                                     <  2:8149177/151‑1 (MQ=255)
                                               cgAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATAGCCGAAGgcgc                                                                                                    >  2:3981887/1‑151 (MQ=255)
                                                 aGTTCACGTTTACCTGCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGTAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGctc                                                                                                  <  2:10987206/151‑1 (MQ=255)
                                                  gTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGcgct                                                                                                 >  1:9066240/1‑151 (MQ=255)
                                                   ttCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCCGGGGTTTCATATCGCCCAAGGCGCTCTg                                                                                                >  1:768891/1‑151 (MQ=255)
                                                     cACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCa                                                                                              <  1:8285436/151‑1 (MQ=255)
                                                       cGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCata                                                                                            <  1:3298374/151‑1 (MQ=255)
                                                        gTTTCCCTTCCCCTGAGCGCCGCCGCCGCTCTTACCCCGGCCTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCatat                                                                                           <  2:7877219/151‑1 (MQ=255)
                                                        gTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCatat                                                                                           <  2:2303930/151‑1 (MQ=255)
                                                         tttACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATc                                                                                          <  1:3773095/151‑1 (MQ=255)
                                                          ttACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCg                                                                                         <  2:1838042/151‑1 (MQ=255)
                                                          ttACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCg                                                                                         <  2:10408338/151‑1 (MQ=255)
                                                           tACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTTGAGATAGGCGAAGGCGCGCTGCATATAGc                                                                                        >  1:1875629/1‑151 (MQ=255)
                                                           tACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATAGCCGAAGGCGCGCAGCCTATAGc                                                                                        >  1:8523230/1‑151 (MQ=255)
                                                               gtCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCg                                                                                    <  2:6066654/150‑1 (MQ=255)
                                                                      gAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCg                                                                             >  2:9192670/1‑151 (MQ=255)
                                                                      gAGCGGCGCCGCCGCTCTTTCCCCGGCGTGTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTGTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCg                                                                             <  2:968038/151‑1 (MQ=255)
                                                                        gcggcgCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTc                                                                           <  1:7236004/151‑1 (MQ=255)
                                                                         cggcgCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGGGCGTcc                                                                          >  2:5251658/1‑151 (MQ=255)
                                                                          ggcgCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCt                                                                         <  1:3049088/151‑1 (MQ=255)
                                                                               cgccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGtc                                                                    <  1:2638800/151‑1 (MQ=255)
                                                                               cgccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTGTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGtc                                                                    <  2:1084537/151‑1 (MQ=255)
                                                                                 ccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGtctc                                                                  <  1:3596724/151‑1 (MQ=255)
                                                                                 ccgcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAAATCGCCGACGGCGCTCTGCCATGCGCTCCGCTGATCGTCCTGGGtctc                                                                  >  2:7375525/1‑151 (MQ=255)
                                                                                   gcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGt                                                                >  2:1842467/1‑151 (MQ=255)
                                                                                   gcTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGt                                                                <  1:79817/151‑1 (MQ=255)
                                                                                    ctctTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTTCATATAGCTCCGCAGCGCGTCCTggggcgaggg                                                               >  1:10799889/1‑144 (MQ=255)
                                                                                         tCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCGGGGTATCGTGCGcac                                                          >  2:3209217/1‑151 (MQ=255)
                                                                                          ccccGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGcaca                                                         <  2:2947876/151‑1 (MQ=255)
                                                                                           cccGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCGCTGCAAATAGCACCGCTGCTCGTCCTGGGTCTCGGGCGcccaa                                                        >  1:11121887/1‑150 (MQ=255)
                                                                                            ccGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATg                                                       <  1:21007/151‑1 (MQ=255)
                                                                                               gcgagtCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCa                                                    <  2:6988556/146‑1 (MQ=255)
                                                                                                cGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCAt                                                   <  2:1254254/151‑1 (MQ=255)
                                                                                                   ttCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTTCAGATAGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTGGTGCTGGGTGGCGGGGGCACATGCCCTTcc                                                >  1:9753238/1‑151 (MQ=255)
                                                                                                    tCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTccc                                               <  2:1672777/151‑1 (MQ=255)
                                                                                                        gccccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCACTGCATATCGCTCCGCTGGGCGTCCGGGGTCTCGTGCGCACATGACATTACCGCAc                                           >  2:7542745/1‑151 (MQ=255)
                                                                                                         ccccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCAcg                                          <  1:5116092/151‑1 (MQ=255)
                                                                                                         ccccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCAcg                                          <  1:1503208/151‑1 (MQ=255)
                                                                                                          cccgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTATCGTGCGCACATTCCATTCCCGCaaga                                         <  2:4672388/151‑4 (MQ=255)
                                                                                                            cgccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCgg                                       <  2:8643457/151‑1 (MQ=255)
                                                                                                             gccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGGTGCAGAAAGCCGAAGGCCCGCAGCAGAAAGCACCGCAGGACGTACGGGGTCGCATGCGCACAAGCCAATAccgcccgccgg                                      >  2:4780824/1‑148 (MQ=255)
                                                                                                             gccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGGGGTTGAAGATACCCCAAGGCGCACATCAAAACGCACCGCGGCACCTACTGGGTATCGTGCGCAAATCCCATTACCGACCGCGGa                                      >  2:5465830/1‑151 (MQ=255)
                                                                                                              ccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGaa                                     <  1:577862/151‑1 (MQ=255)
                                                                                                              ccTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGaa                                     <  1:4871421/151‑1 (MQ=255)
                                                                                                               cTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAAt                                    >  2:2026993/1‑151 (MQ=255)
                                                                                                               cTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCCCCGAAGGCGGTCATCAAATCGCTCCCCTGCGCGTCCTGGGTCTCGTGCGCACAAGCCATTGCCGCACGCggcaa                                    >  2:9394191/1‑148 (MQ=255)
                                                                                                               cTCGGGAAGCGCCGTCGGCCGCGTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAAt                                    <  2:7050696/151‑1 (MQ=255)
                                                                                                                tCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATa                                   <  2:3655338/151‑1 (MQ=255)
                                                                                                                  gggAAGCGCCGTCGGCCGCGTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATAcc                                 <  1:9228491/151‑1 (MQ=255)
                                                                                                                   ggAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCg                                <  1:4291736/151‑1 (MQ=255)
                                                                                                                      aGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGata                             <  1:524823/151‑1 (MQ=255)
                                                                                                                      aGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCGGGGTCTCGTGCGCACATGCCAATCCCGCACGCGGAATACCGata                             >  2:8813173/1‑151 (MQ=255)
                                                                                                                       gcgcCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGatat                            <  1:6655054/151‑1 (MQ=255)
                                                                                                                        cgcCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATAGCCGCAGGCGCTCTGCAGATCGCTCCGCAGCTCGTCCAGGGTATCGTGCGCACAAGCCATTCCCGCACGCGGCAAACCGAAAtt                           >  1:6379856/1‑151 (MQ=255)
                                                                                                                         gcCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTg                          <  1:4096610/151‑1 (MQ=255)
                                                                                                                           cGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGGGCGCTGCCTATCGCTCCGCTGCTCGGGCTGGGTCTCGGGCGCACAAGCCATTCCCGCACGCGGAATACCGATAGTGCg                        >  1:8956942/1‑151 (MQ=255)
                                                                                                                           cGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCg                        <  1:4673098/151‑1 (MQ=255)
                                                                                                                           cGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCGCTGCATATCGCTCCGCTGCTCGTCCTGGGGCGCGTGCGCACATGCCAATACCGCACGCCGGATACCGATATTgag                        >  1:8348349/1‑149 (MQ=255)
                                                                                                                           cGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGAGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGACATTCCCGCACGCGGAATACCGATAtttag                        >  2:10625026/1‑148 (MQ=255)
                                                                                                                            gTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGt                       <  2:198516/151‑1 (MQ=255)
                                                                                                                            gTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCCCTCTGCATATCGCTCCGCTGCACGTACTGGGTCTCGGGCGCACATGCCATTACCGCACGCCGAAAAACGagatatcgt                       >  2:424754/1‑146 (MQ=255)
                                                                                                                             tCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCGGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTa                      >  2:2684199/1‑151 (MQ=255)
                                                                                                                              cGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTAt                     <  2:8016205/151‑1 (MQ=255)
                                                                                                                               ggCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCAGAAAGCACCGCGGCTCGTGCTGGGTCTCGTGGGCACATGCCATTCCCGCACGCGGGATACCGATATTGCGTATg                    >  1:6181879/1‑151 (MQ=255)
                                                                                                                                gCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTTCAGATCGCCGAAGGCGCTCTGCAAATAGCTCCGCTGCTCGTCCGGGGTCTCGTGCGCACAAGCCAATACCGCACCCGGAATAACGATATTTCGGATgg                   >  1:9155948/1‑151 (MQ=255)
                                                                                                                                gCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATgg                   <  2:6249026/151‑1 (MQ=255)
                                                                                                                                   gCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCAAATAGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCCCATGCCAATACCGCACGCGGAAAACCGATAATGAGTATGGGCg                >  2:5059105/1‑151 (MQ=255)
                                                                                                                                    cTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCGCTGCCAATAGCAACGCTGCTCGGCCTGGGTCTCGTGGGCACAAGCCAATACCGCCCGCGGAAAAACGATATTGCGTATGGGCGa               >  2:3759523/1‑151 (MQ=255)
                                                                                                                                    cTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCGCTGCATATCGCACCGCTGCTCGTCCGGGGTCTCGTGCGCACCAGCCAATCCCGCACGCGGAATACCGATATTGCGGATGGGCgc               >  2:9288618/1‑150 (MQ=255)
                                                                                                                                      ttCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAg             <  1:5455610/151‑1 (MQ=255)
                                                                                                                                           gcCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCttt        <  2:6409642/151‑1 (MQ=255)
                                                                                                                                           gcCAGCCCTCGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCttt        <  2:1306484/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
ATCGGCGCGGAGGGCGAATTGAAGGCCGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGAGCGGCGCCGCCGCTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTTGCGAAGGCTCGGCCCCTCACCTCCAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAGG  >  NC_008463/966069‑966364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑