| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 2,318,606 | A→G | E190E (GAA→GAG) | sbrI → | ECF family RNA polymerase sigma factor SbrI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 2,318,606 | 0 | A | G | 99.8% | 2188.2 / NA | 555 | E190E (GAA→GAG) | sbrI | ECF family RNA polymerase sigma factor SbrI |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (264/289); minor base T (1/0); total (266/289) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 568 total aligned reads displayed.
GCCCGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAAGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAGGCGGCGCATG > NC_008463/2318459‑2318753 | gCCCGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCCCGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCgaggag > 1:1304471/1‑151 (MQ=255)gCCCGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCgaggag < 1:2120619/151‑1 (MQ=255) cccGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGaggagg > 2:6285238/1‑151 (MQ=255) ccGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGt > 2:9475578/1‑151 (MQ=255) ccGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGt < 2:909735/151‑1 (MQ=255) aGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGc > 1:2861524/1‑151 (MQ=255) aGCGCGAGGAATTCCTGATGCGCGCCCACGGAGAACTGCCACTGGCCGAGATCGCCACGCTCACCCAGACGCCGCAGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCGGCGCCGCCACCTGGCCGAGGAGGAGGCCGAATg > 2:4922868/1‑151 (MQ=255) gcgAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGGATGAAc > 2:10980077/1‑151 (MQ=255) cgAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAAcc > 2:4495834/1‑151 (MQ=255) cgcaccccTGATGCGCGCCCACCGAGATCCGGATCAGGCCGAGATCTCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCcac < 2:7764484/145‑1 (MQ=255) tATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAg > 1:1930357/1‑151 (MQ=255) aatCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCGGGCCGAGGAGGTGGCGGTATGAACCCACAGa > 2:8342124/3‑151 (MQ=255) aTTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGa > 1:2442998/1‑151 (MQ=255) ttCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGaa < 2:6823953/151‑1 (MQ=255) ttCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGaa > 2:855747/1‑151 (MQ=255) tGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCAt > 2:7488993/1‑151 (MQ=255) gATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCAtt < 1:10641608/151‑1 (MQ=255) gATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCAtt > 2:501099/1‑151 (MQ=255) aTGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTc < 1:2659649/151‑1 (MQ=255) gcgcCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCcgcg > 2:4266737/1‑151 (MQ=255) ccACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCg > 1:1636347/1‑151 (MQ=255) cACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGt > 2:1223360/1‑151 (MQ=255) cACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGt > 2:6348531/1‑151 (MQ=255) aCGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTc > 2:1909997/1‑151 (MQ=255) aCGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTc < 1:6081308/151‑1 (MQ=255) ggAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGTAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGTAGCATTCCGCGAGCGTCGc > 1:5096295/1‑151 (MQ=255) gagaACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGcc < 1:4633091/151‑1 (MQ=255) gagaACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGcc < 1:8029589/151‑1 (MQ=255) gagaACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTGTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGTGGAGGTGGCGGGAGGAACCCACAGAAGCATTCCGCGAGCGTCGcc > 1:9700945/1‑151 (MQ=255) ctggaactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAaga > 1:5718908/1‑151 (MQ=255) tggaactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAagag > 1:10769703/1‑151 (MQ=255) gaactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCa < 1:9457394/151‑1 (MQ=255) gaactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGGATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCa > 2:5438241/1‑151 (MQ=255) aactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTCTGAACCCACAGAAGCATTCCGCGAGCGTCGCCGACGAGCAg > 2:6937555/1‑151 (MQ=255) aactggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAg < 2:6672168/151‑1 (MQ=255) tggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATg > 2:3932663/1‑151 (MQ=255) tggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATg < 2:9357097/151‑1 (MQ=255) tggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATg > 1:7414408/1‑151 (MQ=255) tggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCGGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATg > 2:1015637/1‑151 (MQ=255) ggCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGTGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATga > 1:3147911/1‑150 (MQ=255) gCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCt < 2:10640747/151‑1 (MQ=255) cGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTgg < 1:9010092/151‑1 (MQ=255) cGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTgg < 2:1126582/151‑1 (MQ=255) gagaTCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGCGCGTCGCCGAAGAGCAGATGCTGgc > 2:6060832/1‑151 (MQ=255) ggtCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGTAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGgcgc > 1:9924480/3‑151 (MQ=255) aTCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGTTGCTGGCGCa > 1:5442107/1‑151 (MQ=255) ccACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTc < 2:5200170/151‑1 (MQ=255) cACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTcc < 2:7985874/151‑1 (MQ=255) aCGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCcg < 1:1231517/151‑1 (MQ=255) aCGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCcg < 2:1883421/151‑1 (MQ=255) gCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCcgcg < 1:9091132/151‑1 (MQ=255) gCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCcgcg > 2:2332194/1‑151 (MQ=255) tCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGcc < 1:784339/151‑1 (MQ=255) aCCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCa < 2:3591356/151‑1 (MQ=255) cccAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCCCAGTAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCAc > 1:7327343/1‑151 (MQ=255) ccAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCAcg < 1:10016334/151‑1 (MQ=255) ccAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCAcg < 1:3669809/151‑1 (MQ=255) gTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACgcgc > 1:7266779/1‑151 (MQ=255) tCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGcgcc < 1:3274312/151‑1 (MQ=255) tCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGcgcc > 2:2223755/1‑151 (MQ=255) cgccgcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGcgccg > 2:817229/1‑151 (MQ=255) gccgcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGcgccgc > 1:6008735/1‑151 (MQ=255) gcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCgcagc < 1:877422/151‑1 (MQ=255) gcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCgcagc < 1:6661524/151‑1 (MQ=255) gcTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCAGTTCCGCGCCCACGcgccgccgc > 2:5728668/1‑151 (MQ=255) tGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGcagcag > 2:3722772/1‑151 (MQ=255) ggAGACGGTGAAGATCCGTTTCCGCTACGCGGTGCAGAATCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGTGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCagcagc > 2:10277766/1‑151 (MQ=255) ggAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCGGCTGGCCGAGGAGGTGGCGGTCTGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAGGAGCATAAGCTGGCGCATTTCCGCGCCCACGCGCCGCagcagc > 2:4741750/1‑151 (MQ=255) gagaCGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAgcc < 1:4227237/151‑1 (MQ=255) gaCGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAgccgg < 2:10242375/151‑1 (MQ=255) gaCGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCAATCCCCGAGCGTCGCCCAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAgccgg > 1:3351540/1‑151 (MQ=255) aCGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAgccggc < 1:10938018/151‑1 (MQ=255) gTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAgccggcgcc < 1:5203229/151‑1 (MQ=255) tGAAGAGCCGTTTACGCTACGCGGTGCAGAATCTGCGCCGGCTGCTGGCCGAGGAGGTGGGGGTATGAACCCACAGTAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGGATTTCCGCGCCCTCGCGCCGCAGCAgccggcgccg > 2:10231243/1‑151 (MQ=255) aaGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAgccggcgccggc < 1:3935579/151‑1 (MQ=255) gagCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCAATCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCcggcgccggcgc > 1:3057978/1‑151 (MQ=255) gCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTg < 2:2774919/151‑1 (MQ=255) cGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGa > 1:7160489/1‑151 (MQ=255) gTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGAc < 1:7718556/151‑1 (MQ=255) ttCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGCGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCa < 1:1128933/151‑1 (MQ=255) cGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGc > 1:10222598/1‑151 (MQ=255) cGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCGGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGc < 2:10506575/151‑1 (MQ=255) gcgGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCt > 2:3340298/1‑151 (MQ=255) gcgGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCt > 2:3079728/1‑151 (MQ=255) gcgGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCt > 1:6301313/1‑151 (MQ=255) ggTGCAGTAGCTGCGCCGGCTGCTGGCCGAGGCTGTGGCGGTATGAACCCACTGAAGCATTCCGCGAGCGTCGCCGAAGAGCTGATGCGGGCGCATTACCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTcg < 1:8320489/151‑1 (MQ=255) tGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTcgcc < 1:2505948/151‑1 (MQ=255) tGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGACCCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGa > 1:2315674/1‑151 (MQ=255) tGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACCGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGa < 2:3160461/151‑1 (MQ=255) gcgcCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGAc < 2:4574856/151‑1 (MQ=255) cgcCGGCTGCTGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACg > 2:4037597/1‑151 (MQ=255) cgcCGGCTGCTGGCCGAGGAGGAGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACg > 2:1652441/1‑151 (MQ=255) gctgctGGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAgg > 1:4525315/1‑151 (MQ=255) ctgctgGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAggc > 1:4966869/1‑151 (MQ=255) tgctgGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAggcg > 1:6982991/1‑151 (MQ=255) tgctgGCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAggcg < 2:9692410/151‑1 (MQ=255) ggCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAGGCGgcgc > 2:7201810/1‑151 (MQ=255) ggCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAGGCGgcgc < 1:9309085/151‑1 (MQ=255) gCCGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAGGCGgcgcc > 1:7597561/1‑150 (MQ=255) ccGAGGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAGGCGGCGCAt > 1:10481014/1‑151 (MQ=255) | GCCCGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGAGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAAGAGGTGGCGGTATGAACCCACAGAAGCATTCCGCGAGCGTCGCCGAAGAGCAGATGCTGGCGCATTTCCGCGCCCACGCGCCGCAGCAGCCGGCGCCGGCGCTGGACCAGGCGATCCTCGCCGCCGCGCGACGCCAGGCGGCGCATG > NC_008463/2318459‑2318753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |