| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 3,426,133 | Δ1 bp | intergenic (+104/+138) | mexY → / ← PA14_RS15615 | multidrug efflux RND transporter permease subunit MexY/YjiK family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 3,426,131 | 0 | C | . | 99.7% | 1916.1 / ‑3.3 | 390 | intergenic (+102/+140) | mexY/PA14_RS15615 | multidrug efflux RND transporter permease subunit MexY/YjiK family protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (188/200); minor base G (1/0); total (190/200) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 400 total aligned reads displayed.
GGCGCCGCGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTCCCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTCG > NC_008463/3425981‑3426277 | cgccgcGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTccg < 2:8234527/151‑2 (MQ=255) ccgcGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTccggc > 2:6609959/1‑148 (MQ=255) gcgcACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCa > 1:9352805/1‑151 (MQ=255) cgcACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCaa > 2:1025622/1‑151 (MQ=255) cACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACg > 1:2747558/1‑151 (MQ=255) aCCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACgg < 1:5455055/151‑1 (MQ=255) ccGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGc > 1:5121969/1‑151 (MQ=255) ggCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGccc > 2:1598292/1‑151 (MQ=255) ggCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGccc < 1:8035189/151‑1 (MQ=255) ggCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGccc > 2:9226268/1‑151 (MQ=255) gCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGcctc < 2:8589740/151‑3 (MQ=255) cACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCg > 1:33534/1‑151 (MQ=255) cGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCtt > 1:10835887/1‑151 (MQ=255) cccGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCgg > 1:696391/1‑151 (MQ=255) cccGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCgg < 1:9925310/151‑1 (MQ=255) ccGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCggg > 2:5666859/1‑151 (MQ=255) cGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCgggg > 2:9669190/1‑151 (MQ=255) tCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAg > 2:5218003/1‑151 (MQ=255) tCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAg > 1:1988682/1‑151 (MQ=255) cccGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGc > 1:10779911/1‑151 (MQ=255) ccGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCt < 1:3904895/151‑1 (MQ=255) ccGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCGCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCt > 2:6739752/1‑151 (MQ=255) cGAGGGAGCATGCGTGATGCCCCTAGCGAAACTCTCGCTCCCCCCCCTGGCACTTTGCGTGGGGCGGCTGGGGGCGGGCCCACCTACGCCTCGGCTGCCGCGCGGGGCCCCGATCGTT‑CGGGCCAAGGGCCCCGACCTTCGGGGCAAGCTg < 2:9374976/151‑1 (MQ=255) gACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTgg > 1:2674088/1‑151 (MQ=255) cGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGgac < 1:8250347/151‑1 (MQ=255) aGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGgacgac > 2:3788421/1‑151 (MQ=255) cAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTg < 1:29815/151‑1 (MQ=255) aaGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTgg > 2:818079/1‑151 (MQ=255) gCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCa > 2:6292631/1‑151 (MQ=255) cTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCAGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGACGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCGACGGGGCAAGCTGGACGACTGGCAAc > 1:5186204/1‑151 (MQ=255) cTGAGGCCCCTAGCGACACTCTCGCGCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCGGGACGACTGGCacc < 2:317692/151‑3 (MQ=255) tGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAca > 1:4887047/1‑151 (MQ=255) tGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAca < 2:944484/151‑1 (MQ=255) tGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagca < 1:2578276/151‑1 (MQ=255) gCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAAcagcag > 1:167231/1‑151 (MQ=255) ccccTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGt > 2:10375640/1‑151 (MQ=255) ccTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGTCTGGCAACAGCAGTTc > 1:7376889/1‑151 (MQ=255) gCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCg < 2:2311795/151‑1 (MQ=255) cGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGa < 1:9603138/151‑1 (MQ=255) gAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAc > 1:10496161/1‑151 (MQ=255) gAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAc > 1:857478/1‑151 (MQ=255) aaCTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAccc > 2:4434667/1‑151 (MQ=255) aaCTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGAccc > 2:2917974/1‑151 (MQ=255) aCTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCg < 1:5761511/151‑1 (MQ=255) cGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCgctgct < 2:8496768/151‑1 (MQ=255) cGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCgctgct > 2:4711870/1‑151 (MQ=255) cTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCtgctgc > 1:3178725/1‑151 (MQ=255) ccccACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGa > 1:4086352/1‑151 (MQ=255) cccACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGAc < 1:8772788/151‑1 (MQ=255) ccACCCTGGCACTGTGCGACGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACa < 2:7540316/151‑1 (MQ=255) cACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAg > 1:9053202/1‑151 (MQ=255) cACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAg < 1:7680277/151‑1 (MQ=255) aCCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAga > 2:7124263/1‑151 (MQ=255) cccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgat < 1:4727883/151‑1 (MQ=255) cccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCATCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCACCGACCTACGGGGCAATCTGGACGACAGGCAACAGCAGTTAACCGACCCGCTGCTGCGACAgat > 1:8951575/1‑151 (MQ=255) ccTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAgatg < 1:2230225/151‑1 (MQ=255) catGGCACAGTGCCTCGGGCTGCTCGGCGCCTGCCCAACGACGCATCGGCAGCAGCGCGCGGACCCGATCGTT‑CCGGCCAAAGTCCCCGACCTTCGGGGCAAGCTGGACGACTGTCAACAGCAGTTCAACGACCCGCTGCTGAGACAgatg > 2:6476625/3‑151 (MQ=255) aCTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGc > 1:1771543/1‑151 (MQ=255) cTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCt < 1:7155443/151‑1 (MQ=255) cTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCt > 2:7300495/1‑151 (MQ=255) tgtgCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTa < 1:5393900/151‑1 (MQ=255) gtgCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAc < 1:1376665/151‑1 (MQ=255) gagCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAc < 1:3576568/149‑1 (MQ=255) tgCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAcg < 2:7722930/151‑1 (MQ=255) cGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTAcgcg > 2:1303683/1‑151 (MQ=255) gTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACgcgc > 2:10826461/1‑151 (MQ=255) gTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACgcgc > 2:4890625/1‑151 (MQ=255) cGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCg > 1:10159281/1‑151 (MQ=255) cGGGCCGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCg < 2:4082422/151‑1 (MQ=255) gggCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCGACGCGCCgg > 1:6644342/1‑151 (MQ=255) ctgctCGGCGCCCGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CAGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGATCACCGACCCGCTGCTTCGACAGATGATCGGCTACGCGCGGgcgc > 1:5547329/1‑151 (MQ=255) tCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTCCGCGCCGGCGCTATc > 2:1001448/1‑151 (MQ=255) cGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATcc > 1:430771/1‑151 (MQ=255) cGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATcc < 1:6882510/151‑1 (MQ=255) gcgcCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCgg > 1:10226127/1‑151 (MQ=255) gcgcCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCgg < 1:6126716/151‑1 (MQ=255) cccACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCaa < 1:3694189/151‑1 (MQ=255) ccACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTCCGCGCCGGCGCTATCCGGCGCGCAAg > 2:3072501/1‑151 (MQ=255) ccACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAg < 2:3316818/151‑1 (MQ=255) cACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGc > 2:9697774/1‑151 (MQ=255) ccTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTc < 2:241912/151‑1 (MQ=255) cTCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTGCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCACGCCTGactgcc > 2:5473528/1‑146 (MQ=255) tCGGCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTccg < 1:6351028/151‑1 (MQ=255) gCAGCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTccgccg < 1:3028563/151‑1 (MQ=255) gCCGCGCGCGGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTcc < 1:2427634/151‑1 (MQ=255) gcgcgcgGCCCCGATCGGT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCttt < 2:4223538/151‑1 (MQ=255) cgcgGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTcc > 2:6070254/1‑151 (MQ=255) cgcgGCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTcc > 2:2609104/1‑151 (MQ=255) cgGCCCCGCTCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCGATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCg < 2:10179838/151‑1 (MQ=255) gCCCCGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGcc < 2:1779889/151‑1 (MQ=255) ccccGATCGTT‑CCGGCCACCGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCGATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGccc < 1:3986722/151‑1 (MQ=255) cccGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCACGCTGGACGACTGGCAACAGCAGTTCACCGCCCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAAGTCCGCCGTCCTTTTCCCGCCCt < 2:1484317/151‑1 (MQ=255) cGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAg < 1:8331478/151‑1 (MQ=255) cGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAg < 1:1575160/151‑1 (MQ=255) cGATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCGAg > 1:2119337/1‑151 (MQ=255) gATCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGt < 2:8399530/151‑1 (MQ=255) aTCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTc < 1:4610656/151‑1 (MQ=255) aTCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTc < 2:1988682/151‑1 (MQ=255) tCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTCg < 1:6217261/151‑1 (MQ=255) tCGTT‑CCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTCg < 1:4407013/151‑1 (MQ=255) | GGCGCCGCGCACCGGCACCTCGCCCCGGATCCCGACGGAGCAAGCCTGATGCCCCTAGCGAAACTCTCGCTCCCCACCCTGGCACTGTGCGTCGGGCTGCTCGGCGCCTGCCCACCGACGCCTCGGCAGCCGCGCGCGGCCCCGATCGTTCCCGGCCAACGGCCCCGACCTTCGGGGCAAGCTGGACGACTGGCAACAGCAGTTCACCGACCCGCTGCTGCGACAGATGATCGGCTACGCGCCGGCGCTATCCGGCGCGCAAGCCTGAATTCCGCCGTCCTTTTCCCGCCCTAGTCG > NC_008463/3425981‑3426277 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |