Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 4,437,014 | 0 | A | G | 31.0% | 1039.3 / inf | 540 | D102G (GAC→GGC) | PA14_RS20265 | OmpA family protein |
Reads supporting (aligned to +/- strand): ref base A (191/180); new base G (93/74); total (284/256) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.01e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 544 total aligned reads displayed.
ACGAAGGCTGGGAGTTCGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGCCGGTGGCCGATAACAAGACCCG > NC_008463/4436864‑4437164 | acgaAGGCTGGGAGTTCGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGa < 2:3338896/151‑1 (MQ=255) gaAGGCTGGGAGTTCGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACa < 1:8051913/151‑1 (MQ=255) gaAGGCTGGGAGTTCGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACa > 1:5403268/1‑151 (MQ=255) tGGGAGTTCGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACg < 1:10614468/151‑1 (MQ=255) tGGGAGTTCGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCACAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACg > 2:1961443/1‑151 (MQ=255) ggAGTTCGGCATGTCCAGCAAGCTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGCCGAAGATCGCCCACGCCTTGCTCGCGGTAGACCTCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGc > 2:895022/1‑151 (MQ=255) gAGTTCGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGcg > 2:4789525/1‑151 (MQ=255) tCGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGcgacga > 2:4372137/1‑151 (MQ=255) tCGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGcgacga > 2:4731497/1‑151 (MQ=255) tCGCCATGGCCACCAAGGAGCGGTACGGCAACCATCTCGACCGTCTCAAGCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACCAGGTCCGCCTGGCAGGCCACACCGACAACTACGGcgacga < 2:1520055/151‑1 (MQ=255) cGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGaa < 1:2761019/151‑1 (MQ=255) cGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGaa < 1:1545099/151‑1 (MQ=255) ggCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCATCACCCTGACGAAGATCGCCAACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAg < 1:7513354/151‑1 (MQ=255) ggCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAg < 1:9433797/151‑1 (MQ=255) gCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAgg < 1:8734909/151‑1 (MQ=255) cATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGc > 1:4867259/1‑151 (MQ=255) cATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGc > 1:6425162/1‑151 (MQ=255) aaTGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCACTCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGc < 2:10144696/150‑1 (MQ=255) tCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACa > 1:3895399/1‑151 (MQ=255) cAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAAc > 2:3837972/1‑151 (MQ=255) cAGCAAGGTGCTGTTCGGCAACAATCTCGACCGACTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAAc > 1:3812941/1‑151 (MQ=255) aGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAAcc > 1:5100334/1‑151 (MQ=255) cAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAg > 2:9685546/1‑151 (MQ=255) aaGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGa > 1:10787784/1‑151 (MQ=255) ggTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAg < 2:1721348/151‑1 (MQ=255) gCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGctc > 1:9612674/1‑151 (MQ=255) tGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCGACAACCAGAAGCtctc > 2:6060823/1‑151 (MQ=255) gTTCGGCAACAATCTCGACCGTCTCAATCCCGACATCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTcc < 2:3614176/151‑1 (MQ=255) gTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTcc < 1:84300/151‑1 (MQ=255) ggCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAAc > 1:6568827/1‑151 (MQ=255) ggCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAAc < 1:6934337/151‑1 (MQ=255) caacaaTCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTTACGAAGATAGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACgg < 2:8886702/151‑1 (MQ=255) aacaaTCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGgc < 1:8927158/151‑1 (MQ=255) acaaTCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGgcg > 2:6568354/1‑151 (MQ=255) acaaTCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGgcg > 1:2226838/1‑151 (MQ=255) caaTCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACCAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGgcgc > 2:8573482/1‑151 (MQ=255) caaTCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGgcgc < 1:9309288/151‑1 (MQ=255) caaTCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGgcgc > 2:3144940/1‑151 (MQ=255) aaTCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGgcgcg > 1:10193219/1‑151 (MQ=255) tcGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGa > 2:6379625/1‑151 (MQ=255) cGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGaa > 1:9181907/1‑151 (MQ=255) gACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAAt > 2:5829590/1‑151 (MQ=255) cGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCgg > 1:611483/1‑151 (MQ=255) gTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGt < 2:9100641/151‑1 (MQ=255) gTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGt > 2:281250/1‑151 (MQ=255) ctcAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAg > 2:5596692/1‑151 (MQ=255) ctcAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAAGCGGTAg > 2:10414813/1‑151 (MQ=255) tcAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGc > 2:7990524/1‑151 (MQ=255) tcAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGc > 1:3998322/1‑151 (MQ=255) cAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGcc < 1:8291428/151‑1 (MQ=255) cccGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCgg > 1:4529607/1‑151 (MQ=255) cGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGgtg < 1:581089/151‑1 (MQ=255) gACAGCCGCCACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGgtgt > 2:8267638/1‑151 (MQ=255) gACAGCCGCAACACCCTGACGAAGATCGCCCACGCCGTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGgtgt < 2:4661135/151‑1 (MQ=255) aCAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGtt < 2:1380793/151‑1 (MQ=255) aCAGCCGCAACACCCTGACGAAGATCGACCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCTCGCCGAATCGGTAGCAGCGGTGtt < 2:8643855/151‑1 (MQ=255) cAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTc > 1:1813621/1‑151 (MQ=255) aGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTcc > 1:2496700/1‑151 (MQ=255) gCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTCGCCGCGGTGTTCcg > 2:6734870/1‑151 (MQ=255) ccGCACCACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGGTCcgc < 1:2073000/151‑1 (MQ=255) cGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCcgcg > 2:9633148/1‑151 (MQ=255) aaCACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAg > 2:7381449/1‑151 (MQ=255) acCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCg < 1:1887937/151‑1 (MQ=255) ccTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACCACTACGGCGACGAAGGCTACAACCAGCAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGc < 2:5349894/151‑1 (MQ=255) tGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACCCCTGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCAt < 1:1283349/151‑1 (MQ=255) gacgATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAACCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCcg < 1:7799719/148‑1 (MQ=255) aGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCcggc > 1:4806706/1‑151 (MQ=255) gCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCa > 1:2957937/1‑151 (MQ=255) aCGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACAt < 2:5121120/151‑1 (MQ=255) cGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACCCCGACACCTACGGCGACGACGGCTACAACCAGACGCTCTCCGACCGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATc < 2:233597/151‑1 (MQ=255) cGCCTTGCTCGCGGTAGACAACGACAAGGTCCGCCTTGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATc < 1:589414/151‑1 (MQ=255) gCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCg > 1:2359120/1‑151 (MQ=255) gCCTTCCTCGCGGTCGACATCGACAAGGACCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCg < 2:7426225/151‑1 (MQ=255) cgtGCTCGCGGTAGACATCGACACGGTCCGCCTGGAAGGCCACACCGGCAACTACCGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAg < 2:1888611/149‑1 (MQ=255) cTTGCTCGCGGTCGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGGTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAg < 2:2682947/151‑1 (MQ=255) cTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAg > 2:2515758/1‑151 (MQ=255) ttGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACACCTACGGCGACGAAGGCTACAACCAGACGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAgg < 2:3117250/151‑1 (MQ=255) cTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTcc < 2:9337481/151‑1 (MQ=255) tCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCcg < 1:3302549/151‑1 (MQ=255) cgcgGTAGACATCGACAAGGTCAGCCTGGAAGGACACACCGACAACTCCGGCTACGAAGGCAACAACAAGAACCTCTCCGAACGGCGCGCCGAATCGGTAGACGCGGTGTGACGCGAATCCGGCATGCAGGCTGCCAACATCGAGGTCcgc > 2:7844532/1‑151 (MQ=255) gcgGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCcgcg < 2:4959356/151‑1 (MQ=255) gTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCCGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGcc < 1:4659307/151‑1 (MQ=255) aGACATCGACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTg < 1:3182171/151‑1 (MQ=255) aGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCGCTCCGACCGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTg > 2:4207066/1‑151 (MQ=255) gACATCGACAAGGTCCGCCTGGCAGGCCACACCGACACCTACGGCGACGAAGGCTACACCCCGACGCTCTCCGAACGGCGCGCCGATTCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTgg < 2:7588312/151‑1 (MQ=255) aTCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCa > 2:6275898/1‑151 (MQ=255) gACAAGGTCCGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCCGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGGGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGa < 2:2114065/151‑1 (MQ=255) gACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGa > 2:10728144/1‑151 (MQ=255) aGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCaa < 1:7149132/151‑1 (MQ=255) gTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGc < 1:10443218/151‑1 (MQ=255) gTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGc > 1:9782629/1‑151 (MQ=255) tCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGcc > 2:3379726/1‑151 (MQ=255) cGCCTGGAAGGCCACACCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGCCgg > 2:3934575/1‑151 (MQ=255) cTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGCCGGTgg > 1:4272305/1‑151 (MQ=255) ggAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGCCGGTGGcc < 1:2026700/151‑1 (MQ=255) gAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGCCGGTGGCCg > 1:3607590/1‑151 (MQ=255) acacCGGCAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGCCGGTGGCCGATAACaa > 1:3567893/1‑151 (MQ=255) cGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGCCGGTGGCCGATAACAAGAcc < 1:4158727/151‑1 (MQ=255) gACACCTACGGCGACGAAGGCTACAACCAGAAGCACTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGCCGGTGGCCGATAACAAGAccc < 2:7245872/151‑1 (MQ=255) gACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGCCGGTGGCCGATAACAAGAccc > 2:7028478/1‑151 (MQ=255) | ACGAAGGCTGGGAGTTCGGCATGTCCAGCAAGGTGCTGTTCGGCAACAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACGAAGATCGCCCACGCCTTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCACACCGACAACTACGGCGACGAAGGCTACAACCAGAAGCTCTCCGAACGGCGCGCCGAATCGGTAGCCGCGGTGTTCCGCGAAGCCGGCATGCCGGCGGCCAACATCGAGGTCCGCGGCCTGGGCATGAGCAAGCCGGTGGCCGATAACAAGACCCG > NC_008463/4436864‑4437164 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |