Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_008463 5,395,470 Δ1 bp intergenic (‑103/+50) PA14_RS24730 ← / ← PA14_RS24735 hypothetical protein/ATP‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0084635,395,4670G.96.4% 1563.9 / 58.8 384intergenic (‑100/+53)PA14_RS24730/PA14_RS24735hypothetical protein/ATP‑binding protein
Reads supporting (aligned to +/- strand):  ref base G (0/10);  major base . (175/173);  minor base C (0/13);  total (177/207)
Fisher's exact test for biased strand distribution p-value = 2.10e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 407 total aligned reads displayed.

CGCGTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGGCGGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAG  >  NC_008463/5395318‑5395612
                                                                                                                                                     |                                                                                                                                                 
cgcgTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAg                                                                                                                                                   <  1:9703526/150‑1 (MQ=255)
 gcgTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCTCGAgg                                                                                                                                                  >  2:8001664/1‑150 (MQ=255)
   gTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggc                                                                                                                                                >  2:2367553/1‑149 (MQ=255)
     ggTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcgg                                                                                                                                              <  1:7636715/150‑4 (MQ=255)
      gTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcggg                                                                                                                                             <  1:10431943/150‑5 (MQ=255)
      gTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcggg                                                                                                                                             <  1:6456943/150‑5 (MQ=255)
      gTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAgggcggg                                                                                                                                             >  1:7072226/1‑146 (MQ=255)
            cccAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTc                                                                                                                                     <  1:4183169/150‑1 (MQ=255)
                    aGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCg                                                                                                                             >  1:9972740/1‑150 (MQ=255)
                     gggCGGATGAGGCAGGGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGc                                                                                                                            >  1:284946/1‑150 (MQ=255)
                     gggCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGc                                                                                                                            >  2:454022/1‑150 (MQ=255)
                      ggCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGcc                                                                                                                           >  1:9433987/1‑150 (MQ=255)
                      ggCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGcc                                                                                                                           >  2:7478144/1‑150 (MQ=255)
                        cGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCt                                                                                                                         <  1:4557378/150‑1 (MQ=255)
                         ggATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTc                                                                                                                        <  1:1874744/150‑1 (MQ=255)
                          gATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCg                                                                                                                       >  1:236251/1‑150 (MQ=255)
                          gATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCg                                                                                                                       >  2:6736063/1‑150 (MQ=255)
                           aTGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCgg                                                                                                                      >  1:8144524/1‑150 (MQ=255)
                           aTGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCgg                                                                                                                      >  1:10051409/1‑150 (MQ=255)
                            tGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGc                                                                                                                     >  2:9467960/1‑150 (MQ=255)
                            tGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGc                                                                                                                     >  1:870911/1‑150 (MQ=255)
                                gCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGt                                                                                                                 >  1:5904157/1‑150 (MQ=255)
                                  agagGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTc                                                                                                               >  2:3514475/1‑150 (MQ=255)
                                      gTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGc                                                                                                           >  2:3733553/1‑150 (MQ=255)
                                      gTTACGCGGCATGGCGGCACCCTCCGGGGGTTTCCCATTTTTGAGCATACACCCGCCGCCAGGTTCCCCATAGCGCCGGCGGCAAATGGGCCACCGGGATGAACCGCCCGTGGGCGGGGATTACCAGCCCCGCCCTCGGCAGGTTCCGGc                                                                                                           <  1:10660841/150‑1 (MQ=255)
                                       ttACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCa                                                                                                          >  2:2481538/1‑150 (MQ=255)
                                         aCGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAAc                                                                                                        >  2:3203946/1‑150 (MQ=255)
                                           gcgGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGTAACGCACGTGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAAcgc                                                                                                      >  2:6963675/1‑150 (MQ=255)
                                            cgGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAAcgcg                                                                                                     >  1:6743778/1‑150 (MQ=255)
                                             ggCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACgcgc                                                                                                    >  1:4918536/1‑150 (MQ=255)
                                               cctGGCGGCATCCTCACGGGGGTTCGCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGGTCCGGCAACGCGCCg                                                                                                  >  2:8175062/3‑150 (MQ=255)
                                                aTGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCgg                                                                                                 >  1:9046554/1‑150 (MQ=255)
                                                 tGGCGGCACCCTCCCGGGGGTTCCCAGTTTTGAGCCTCCCCCGGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGGCCCCCGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGa                                                                                                <  2:10597307/150‑1 (MQ=255)
                                                  ggcggcATCCTCAGGGGGGTTCCCAGTTTTGAGCCAACACCTGCCGCCCGGTTCCGCATCGCGCCGGCGGGAACTTGTCCACTGGGCTTAACCGCACGAGGGCGGGGCTTGCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGAc                                                                                               <  1:10721997/150‑1 (MQ=255)
                                                    cggcATCCTCACGGGGGTTCCCAGTTTTGATCCTACCCCTGCCGCCAGTTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCACCGCGCCGGACTc                                                                                             <  2:485337/150‑1 (MQ=255)
                                                       cATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGt                                                                                          >  1:8003389/1‑150 (MQ=255)
                                                          ccTCCCGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACCGGGCTGAAACCCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCct                                                                                       <  2:3854163/150‑1 (MQ=255)
                                                           cTCACGGGGGTACCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCctt                                                                                      <  1:2729652/150‑1 (MQ=255)
                                                            tCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttc                                                                                     <  2:3425712/150‑1 (MQ=255)
                                                             cACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttct                                                                                    <  2:5305004/150‑1 (MQ=255)
                                                              ccGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAACCGCACGCGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttctt                                                                                   <  1:2600028/149‑1 (MQ=255)
                                                              aCGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttctt                                                                                   >  2:4116557/1‑150 (MQ=255)
                                                              aCGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttctt                                                                                   <  1:11100708/150‑1 (MQ=255)
                                                              aCGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCcttctt                                                                                   <  2:5098938/150‑1 (MQ=255)
                                                               cGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCttcttc                                                                                  >  2:6566702/1‑150 (MQ=255)
                                                                 ggggTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgc                                                                                >  2:1320867/1‑150 (MQ=255)
                                                                  gggTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGGTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgcc                                                                               <  2:5875570/150‑1 (MQ=255)
                                                                  gggTTCCCAGTTTTGAGCCAACACCTGACGCCAGGTTCCGCATAGCGCCGGCGGGAACAAGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTATCCAGCCCCGCCCTCGGCAGGTACAGGCACCCCGCCGGACTAACTCCATCTTcgcc                                                                               >  1:4040680/1‑150 (MQ=255)
                                                                    gTTCCCAGTTTTGAGCCTACCCCTGCCGCCTGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTcgccgc                                                                             <  1:1229376/150‑1 (MQ=255)
                                                                      tCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCgg                                                                           >  2:6241648/1‑150 (MQ=255)
                                                                        ccAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTACCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGcc                                                                         >  1:4369372/1‑150 (MQ=255)
                                                                         cAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCt                                                                        >  1:4531139/1‑150 (MQ=255)
                                                                          aGTTGTTAGCCTACCCCTGCCGCCAGGTTCCGCACAGCGCCGGCGGGAACTGGTCCACAGGGCTGAACCGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCtt                                                                       <  2:2210787/150‑1 (MQ=255)
                                                                           gTTTTGAGCCTACACCGGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTg                                                                      <  1:4459478/150‑1 (MQ=255)
                                                                            ttttGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCTCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGt                                                                     <  2:1798730/150‑1 (MQ=255)
                                                                            ttttGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGt                                                                     >  2:8670123/1‑150 (MQ=255)
                                                                                gAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCtt                                                                 <  2:9722994/150‑1 (MQ=255)
                                                                                   ccTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgc                                                              >  2:907688/1‑150 (MQ=255)
                                                                                    cTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGTAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTcgcc                                                             <  1:5190696/150‑1 (MQ=255)
                                                                                        acCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGa                                                         >  1:6791038/1‑150 (MQ=255)
                                                                                          cTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACg                                                       <  2:9335342/150‑1 (MQ=255)
                                                                                             ccgccAGGTTCCGCATAGCGCCGGCGGTAACTTGTCCACTGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGtc                                                    <  1:6245973/150‑1 (MQ=255)
                                                                                                cccggTTCCGCATAGCGCCGGCGGGAACTTGTCCACCGGGCTGAACCGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTctct                                                 <  1:2510342/147‑1 (MQ=255)
                                                                                                ccAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTctct                                                 <  2:10228806/150‑1 (MQ=255)
                                                                                                ccAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTctct                                                 <  2:8846605/150‑1 (MQ=255)
                                                                                                  aGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACCGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCttt                                               <  2:2589779/150‑1 (MQ=255)
                                                                                                   gtttCCGCATAGCGCCGGGGGTAAGTTGTCCACCGGGCTGAAACGCACGTGGG‑‑GGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTtc                                              <  1:3822713/148‑1 (MQ=255)
                                                                                                   ggTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTtc                                              >  2:1078441/1‑150 (MQ=255)
                                                                                                    gTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTtct                                             >  2:10883646/1‑150 (MQ=255)
                                                                                                      tCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTtctc                                            <  2:207579/149‑1 (MQ=255)
                                                                                                      tCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTtctc                                            >  1:207579/1‑149 (MQ=255)
                                                                                                      tCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTcc                                           >  2:7655823/1‑150 (MQ=255)
                                                                                                       ccGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccg                                          <  1:5455990/150‑1 (MQ=255)
                                                                                                        cGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgc                                         >  2:2937172/1‑150 (MQ=255)
                                                                                                         gCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgcc                                        <  2:4914176/150‑1 (MQ=255)
                                                                                                          cATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgccg                                       <  1:10824534/150‑1 (MQ=255)
                                                                                                          cATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTccgccg                                       >  2:11026224/1‑150 (MQ=255)
                                                                                                            tAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGTGGGCGTGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGc                                     <  2:6042882/150‑1 (MQ=255)
                                                                                                                  cggcggGAACTTGGCCACAGGGCTGAAACGCTCTAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTcc                               <  2:5805171/150‑1 (MQ=255)
                                                                                                                   ggcggGAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCt                              >  1:8399142/1‑150 (MQ=255)
                                                                                                                       ggAACTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTc                          >  1:305782/1‑150 (MQ=255)
                                                                                                                        gaccTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTAGCCGCGGCCGTGTCCGACGCCGCGACGGTCTCTTTCTCAGCCGGCTTGTCCTTTTcc                         >  1:568636/4‑150 (MQ=255)
                                                                                                                         aaCTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCt                        <  2:3779807/150‑1 (MQ=255)
                                                                                                                           cTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTg                      <  2:7850610/150‑1 (MQ=255)
                                                                                                                           cTTGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTg                      >  1:3257096/1‑150 (MQ=255)
                                                                                                                            ttGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCTGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgt                     <  1:4793398/150‑1 (MQ=255)
                                                                                                                            ttGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgt                     >  1:5737832/1‑150 (MQ=255)
                                                                                                                            ttGTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgt                     <  2:284946/150‑1 (MQ=255)
                                                                                                                              gTCCACCGGGCTGAAACGCCCGAGGGCGGGGATTACCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtcg                   <  1:9365505/150‑1 (MQ=255)
                                                                                                                              gTCCACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtcg                   <  2:1580763/150‑1 (MQ=255)
                                                                                                                               tCCACAGGGCTTAAACGCACGTGGG‑‑GGGGGCTTGCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtcgt                  <  1:7478144/150‑1 (MQ=255)
                                                                                                                                ccACAGGGCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTgtcgtc                 <  1:8837463/150‑1 (MQ=255)
                                                                                                                                     gggCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCGTGTCCTTTTCCTTGTCGTCCTCtt            >  2:7414428/1‑150 (MQ=255)
                                                                                                                                      ggCTGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTc           >  1:3428495/1‑150 (MQ=255)
                                                                                                                                         tGAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCAt        <  1:2449909/150‑1 (MQ=255)
                                                                                                                                          gAAACGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATg       >  2:7200701/1‑150 (MQ=255)
                                                                                                                                           aaaCGCACGAGGGCGGGGCTGTCCAGCCCCGCCCCCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGc      <  2:4642619/150‑1 (MQ=255)
                                                                                                                                            aaCGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGcc     <  2:5580914/150‑1 (MQ=255)
                                                                                                                                             ccGCACGAGGGCGGGGCTTCCCAGCCCCGCCCCCGGCAGGTTCCCGCACCGCGCCGGACTCAGTCCTTCTTCGCCGCTGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCTGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCg    <  2:8969824/149‑1 (MQ=255)
                                                                                                                                              cGCACGAGGGCGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCCGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGa   >  1:1483900/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
CGCGTGGTCAGCCCCAGACAAGGGCGGATGAGGCAGAGGTTACGCGGCATGGCGGCATCCTCACGGGGGTTCCCAGTTTTGAGCCTACACCTGCCGCCAGGTTCCGCATAGCGCCGGCGGGAACTTGTCCACAGGGCTGAAACGCACGAGGGGCGGGGGCTTTCCAGCCCCGCCCTCGGCAGGTTCCGGCAACGCGCCGGACTCAGTCCTTCTTCGCCGCGGCCTTGTCCTTCGCCGCGACGGTCTCTTTCTCCGCCGGCTTGTCCTTTTCCTTGTCGTCCTCTTCCATGCCGAG  >  NC_008463/5395318‑5395612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: