| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 6,205,906 | Δ1 bp | intergenic (‑11/+186) | PA14_RS28345 ← / ← PA14_RS28350 | type VI secretion system tip protein VgrG/Hcp family type VI secretion system effector |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 6,205,903 | 0 | C | . | 100.0% | 469.3 / NA | 292 | intergenic (‑8/+189) | PA14_RS28345/PA14_RS28350 | type VI secretion system tip protein VgrG/Hcp family type VI secretion system effector |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (132/160); total (132/160) | |||||||||||
Only 100 of 314 total aligned reads displayed.
GGGGCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTCCCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGCT > NC_008463/6205755‑6206018 | ggggCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTcc > 1:10264414/1‑150 (MQ=32)ggggCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTcc < 1:6685347/150‑1 (MQ=32) gggCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTccc > 1:5474775/1‑150 (MQ=32) ggCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTccct < 1:6215960/150‑2 (MQ=14) gCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTccctc > 1:4808296/1‑148 (MQ=11) cGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACCTCCGTTGTccctca > 2:9847841/1‑147 (MQ=1) cGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTccctca < 1:9466910/150‑4 (MQ=1) cGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTccctca > 1:5527780/1‑147 (MQ=1) cGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTccctca < 1:3946542/150‑4 (MQ=1) ggTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgatt < 1:10172041/150‑1 (MQ=1) ggTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgatt < 2:7440839/150‑1 (MQ=1) ggTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgatt < 2:5289682/150‑1 (MQ=1) ggTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgatt < 2:3841356/150‑1 (MQ=1) ggTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgatt < 1:765836/150‑1 (MQ=1) cGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgattcga > 1:5622975/1‑150 (MQ=11) cGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACcgattcga < 1:4984539/150‑1 (MQ=11) aGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTg > 2:8199631/1‑150 (MQ=11) ggCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGt > 2:7955406/1‑150 (MQ=11) cGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcc < 1:6586589/150‑1 (MQ=11) cGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcc < 1:9009865/150‑1 (MQ=11) cGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcc < 2:10621204/150‑1 (MQ=11) gAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcct > 1:8475611/1‑150 (MQ=11) gAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcct < 2:6984550/150‑1 (MQ=11) aCGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcctgc < 2:10385743/150‑1 (MQ=11) cGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcctgcc < 1:8752442/150‑1 (MQ=11) ggctggctGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcctgcct < 1:583387/150‑1 (MQ=11) gctggctgATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTcctgcctg > 1:5113976/1‑150 (MQ=11) ctggctgATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTgg < 2:4423867/150‑1 (MQ=11) ctggctgATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTgg > 1:9249528/1‑150 (MQ=11) ctggctgATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTgg < 2:1617323/150‑1 (MQ=11) tgATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCgg > 1:4038489/1‑150 (MQ=11) gATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCggg > 1:9636033/1‑150 (MQ=11) gATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCggg < 1:3407461/150‑1 (MQ=11) tGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCg < 1:4131606/150‑1 (MQ=11) gCTTCGCGGCCTCTTAAGGAGAGCTCCTGCTCGTCGTGGGCGAGGCCGTCGTTTGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTGTCTGGCGCAGGCGACCGATTCGTTTGTCCTGCCTGGCGCGGGCgag < 2:2788257/150‑1 (MQ=11) cTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCgaga < 2:5046560/150‑1 (MQ=11) cTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCgaga < 2:7053627/150‑1 (MQ=11) cTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGAGGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCgaga < 2:4296591/150‑1 (MQ=2) cTTCGCGGCCGCTGAAGGAGAGCACCGGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAAGGGGTCTGGTGGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCgaga < 2:6824170/150‑1 (MQ=255) tCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACa < 2:2231715/150‑1 (MQ=11) cgcgGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACaa < 1:1618171/150‑1 (MQ=11) gcgGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAg < 1:6292643/150‑1 (MQ=11) cgGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAgg > 1:475667/1‑150 (MQ=11) ggCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAggg > 2:3246293/1‑150 (MQ=11) ggCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAggg < 2:10117771/150‑1 (MQ=11) ggCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAggg < 2:838988/150‑1 (MQ=11) cTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGgcgcgc < 1:8662837/150‑1 (MQ=11) tGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCa > 1:8173260/1‑150 (MQ=11) gAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAg > 1:2872066/1‑150 (MQ=11) gAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCGGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAg > 2:3349336/1‑150 (MQ=2) aaGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGACATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGTGACCAGGGCGCGCAgg > 2:8037657/1‑150 (MQ=255) gagaGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTc < 1:211536/150‑1 (MQ=11) gagCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGa < 2:2010440/150‑1 (MQ=11) agCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGAt < 1:10061104/150‑1 (MQ=11) agCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGAt < 2:8594003/150‑1 (MQ=11) agCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGAt < 2:6546419/150‑1 (MQ=11) gCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATc > 2:9177314/1‑150 (MQ=11) cACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCg < 2:355342/150‑1 (MQ=11) aCCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCgg > 2:4916956/1‑150 (MQ=11) cTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGaa < 1:7144343/150‑1 (MQ=11) cTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGaa > 1:2650247/1‑150 (MQ=11) cTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGaa < 1:1846160/150‑1 (MQ=11) gCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGc < 2:873520/150‑1 (MQ=11) cAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCt > 1:1471764/1‑150 (MQ=11) aGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTg > 2:7358265/1‑150 (MQ=11) ggTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTATGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGc > 1:71976/1‑150 (MQ=2) aGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTaca < 1:10979116/150‑1 (MQ=11) ggCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTacaac < 1:3025151/150‑1 (MQ=11) cGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTAcaacaa < 1:10621668/150‑1 (MQ=11) gAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACaaa < 2:2384805/150‑1 (MQ=11) gAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACaaa < 2:5541642/150‑1 (MQ=11) gAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACaaa < 1:10689850/150‑1 (MQ=11) aGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAg > 1:3846043/1‑150 (MQ=11) aGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAg < 1:4216479/150‑1 (MQ=11) gCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCg < 2:8859968/150‑1 (MQ=11) ccGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCgg < 1:10446941/150‑1 (MQ=11) cGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGc < 2:1566196/150‑1 (MQ=11) gTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCa > 1:2462231/1‑150 (MQ=11) gTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCa < 2:6910023/150‑1 (MQ=11) gTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTAACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCa > 2:5961998/1‑150 (MQ=2) tCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCAt > 1:4580135/1‑150 (MQ=11) tCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCAt < 2:4007512/150‑1 (MQ=11) tCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCAt < 1:3005270/150‑1 (MQ=11) tCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCAt > 2:6114018/1‑150 (MQ=11) tCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCAt > 2:2170144/1‑150 (MQ=11) tGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGAc < 1:3165977/150‑1 (MQ=11) tGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGAc > 1:8891210/1‑150 (MQ=11) ggCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGAcc < 1:8411638/150‑1 (MQ=11) gCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGAccc < 2:7805449/150‑1 (MQ=11) aGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGgc < 2:4773075/150‑1 (MQ=11) ggCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGgcg < 2:10907607/150‑1 (MQ=11) ggCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCAGTTGT‑CCCTCACTGGCTCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGAGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGgcg > 1:2219398/1‑150 (MQ=255) gCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGgcgc < 1:7896931/150‑1 (MQ=11) gAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCggg > 1:1115099/1‑150 (MQ=11) gAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCggg > 2:9730768/1‑150 (MQ=11) aaaTGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGc < 2:2487874/150‑1 (MQ=11) aaaTGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGc < 2:9483835/150‑1 (MQ=11) aaTGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGCt < 1:7449689/150‑1 (MQ=1) aaTGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGCt > 1:9833417/1‑150 (MQ=1) aaTGGGTCTGGTTGGCTGCTGCGAACATCCGTTGT‑CCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGCt < 1:8131500/150‑1 (MQ=1) | GGGGCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCTGAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAATGGGTCTGGTTGGCTGCTGCGAACATCCGTTGTCCCCTCACTGGCGCAGGCGACCGATTCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGCGCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGCT > NC_008463/6205755‑6206018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |