| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_008463 | 5,692,325 | (C)6→7 | coding (42/1404 nt) | lpdA ← | dihydrolipoyl dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_008463 | 5,692,319 | 1 | . | C | 98.1% | 1786.6 / 19.4 | 475 | coding (48/1404 nt) | lpdA | dihydrolipoyl dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base . (1/8); new base C (199/266); total (201/274) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.59e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 516 total aligned reads displayed.
CGCTCGCCGCGGCGTATAGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAG‑CCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCGAAAGCGATTGTATT > NC_008463/5692171‑5692463 | cTCGCCGCGGCGTATAGCTCCGAAGCGTGCAACATGGCCTTGGAAGGCATACAGCCGACGTACAGTCAAGTCCCGCAGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAG‑ccc > 2:373212/1‑150 (MQ=255) cTCGCCGCGGCGTATAGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAG‑ccc < 1:10767649/150‑1 (MQ=255) tCGCCGCGGCGTATAGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAG‑cccc > 2:1365255/1‑150 (MQ=255) gccgcGGCGTATAGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAG‑cccc‑cc < 2:8508869/150‑1 (MQ=255) gcggcgTATAGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAG‑cccc‑cccgg > 1:3657730/1‑147 (MQ=255) ggcgTATAGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAG‑cccc‑cccggac > 2:4340131/1‑145 (MQ=255) ggcgTATAGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAG‑cccc‑cccggac < 2:5732872/150‑6 (MQ=255) gcgTAGAGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGAcc < 2:9021503/150‑1 (MQ=255) gTATAGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCgg < 2:9299652/150‑1 (MQ=255) tataGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGgc < 1:10896324/150‑1 (MQ=255) ataGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGgcg < 1:5476024/150‑1 (MQ=255) taGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGgcgc > 2:6449489/1‑150 (MQ=255) gCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCcg > 2:3607329/1‑150 (MQ=255) gCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCcg > 1:4140632/1‑150 (MQ=255) cTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCcga > 1:4235927/1‑150 (MQ=255) gCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCATGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCcgatcacgat < 2:2489158/150‑1 (MQ=255) cctGCAACAGGGCCTAGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAG‑CCCCACCTGACCGGCGCcgatcacgatc < 2:10338771/148‑1 (MQ=255) tGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCgatcacgatcac < 1:2260247/150‑1 (MQ=255) cAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGt < 1:9062478/150‑1 (MQ=255) aCAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCa < 1:10013789/150‑1 (MQ=255) aCAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCa < 1:1250436/150‑1 (MQ=255) gggCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAg > 1:203270/1‑150 (MQ=255) gggCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAg > 2:7983918/1‑150 (MQ=255) tGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTcc > 2:6054936/1‑150 (MQ=255) ggACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCca < 1:10553618/150‑1 (MQ=255) cGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCcatca < 1:5816482/150‑1 (MQ=255) cATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATcc < 1:6363965/150‑1 (MQ=255) cATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATcc < 2:355763/150‑1 (MQ=255) cATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATcc > 1:4607995/1‑150 (MQ=255) aTACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCAAGATCTCGTCGTAGCGTTCCCTCATCCt > 1:7826863/1‑150 (MQ=255) tACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTg < 1:8685402/150‑1 (MQ=255) cAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTGTCCATCATCCTGct < 2:8716758/150‑1 (MQ=255) aGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGctc > 2:10770166/1‑150 (MQ=255) ccGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGctcct < 1:5190189/150‑1 (MQ=255) cGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGt < 1:5982920/150‑1 (MQ=255) cGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGt < 1:6956558/150‑1 (MQ=255) gTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGtt > 1:4876995/1‑150 (MQ=255) ttCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCAGCATCCTGCTCCTCGGTTg > 1:5095792/1‑150 (MQ=255) cAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTc > 2:190618/1‑150 (MQ=255) cAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTc < 2:7091100/150‑1 (MQ=255) gccacgacccGCCGAGGGAGTCGCGTCCCTCCCCGCAGGCCCCCCTCAGGCCTAGCGGGCCGGCGGCAATGGCAGCGTTGTAGCCCCC‑CCGGAGCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTccc < 2:5952664/143‑1 (MQ=255) gCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCg > 1:5265169/1‑150 (MQ=255) gCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCg < 1:5631147/150‑1 (MQ=255) aGTCCCGCCGAGGGTTTCGCGACCCACCACGCAGGCCACCTACAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCa < 1:7649272/150‑1 (MQ=255) tCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGTCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACg < 1:3303227/150‑1 (MQ=255) gAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCt > 2:4101795/1‑150 (MQ=255) gAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCt < 2:6755087/150‑1 (MQ=255) aGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTc < 2:506307/150‑1 (MQ=255) gggTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGGTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCGGCTCCTCGGTTGTCCCGCCACGGCCCCCTCa < 2:10203985/150‑1 (MQ=255) tttCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCg > 2:9165783/1‑150 (MQ=255) tCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTa > 1:3010435/1‑150 (MQ=255) cgACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGc > 1:3190681/1‑150 (MQ=255) cgACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGc > 1:80409/1‑150 (MQ=255) gACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCg > 2:1686455/1‑150 (MQ=255) aCCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCCTCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGa < 2:2600333/150‑1 (MQ=255) aCCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGa > 1:10057611/1‑150 (MQ=255) cccTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGAc < 2:5177792/150‑1 (MQ=255) cTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGc < 1:2793630/150‑1 (MQ=255) cTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGc < 2:3926907/150‑1 (MQ=255) tCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGcc < 1:9873760/150‑1 (MQ=255) ccACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTCGGCGACGCCg > 1:6815809/1‑150 (MQ=255) ccACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCg < 1:6522782/150‑1 (MQ=255) cACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCgg > 2:10395132/1‑150 (MQ=255) aCGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGgc > 2:5552737/1‑150 (MQ=255) aGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCaa < 2:2833567/150‑1 (MQ=255) aGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGAACACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGAAGGCGACGCCGGCGCaa > 1:1321798/1‑150 (MQ=255) gCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCTCGTCATAGCTTTCCAGCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCCGCGTAGGCGACGCCGGCGCAAAt > 2:616987/1‑150 (MQ=255) gCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAAt < 1:6201711/150‑1 (MQ=255) ccACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATa > 1:8902005/1‑150 (MQ=255) cTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAgg > 1:10335658/1‑150 (MQ=255) cTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCAACATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGCgg < 2:4559790/150‑1 (MQ=255) aGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAAc < 2:10576662/150‑1 (MQ=255) aGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTGTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAAc < 1:2126698/150‑1 (MQ=255) gCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAAcgc < 1:9257416/150‑1 (MQ=255) gCCTAGCTGGCCGGCGCGAATGGCAGCGGTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGACAcgc > 1:1489897/1‑150 (MQ=255) ccTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAAcgcc > 1:4436006/1‑150 (MQ=255) ccTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAAcgcc < 2:5698060/150‑1 (MQ=255) ccTAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAAcgcc < 2:8348253/150‑1 (MQ=255) tAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAAcgccgc < 1:3401011/150‑1 (MQ=255) tAGCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAAcgccgc > 1:1618610/1‑150 (MQ=255) gCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATATCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGACACGCCGCGt > 1:8348969/1‑150 (MQ=255) gCTGGCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGt > 2:10914401/1‑150 (MQ=255) ggCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTaga < 2:5372677/150‑1 (MQ=255) ggCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTaga < 2:2186105/150‑1 (MQ=255) gCCGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTagag < 2:4218999/150‑1 (MQ=255) ccGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAgg < 2:655365/150‑1 (MQ=255) cGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGCTCACGATCACGTCATCGCTTTCCCTCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGCGGAAACGCCGCGTAGAggg < 2:8809349/150‑1 (MQ=255) cGGCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAggg < 2:3264531/150‑1 (MQ=255) ggCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGa < 2:9687877/150‑1 (MQ=255) ggCGCGAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGa < 1:6672600/150‑1 (MQ=255) gcgAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCg < 2:10065955/150‑1 (MQ=255) cgAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCGa < 1:2486784/150‑1 (MQ=255) cgAATGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCGa < 1:7359192/150‑1 (MQ=255) aaTGGCAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCGaaa < 2:4777958/150‑1 (MQ=255) aaTGGCAGCGTGGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCGaaa > 2:7455953/1‑150 (MQ=255) cAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCGAAAGCGAt < 1:830659/150‑1 (MQ=255) cAGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCGAAAGCGAt < 2:6617770/150‑1 (MQ=255) aGCGTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCGAAAGCGAtt < 2:11104064/150‑1 (MQ=255) gTTGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCGAAAGCGATTGTa < 2:2299387/150‑1 (MQ=255) tGTAGCCCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCGAAAGCGATTGTAtt < 2:7270112/150‑1 (MQ=255) | CGCTCGCCGCGGCGTATAGCTCCGAAGCGTGCAACAGGGCCTTGGACGGCATACAGCCGACGTTCAGGCAAGTCCCGCCGAGGGTTTCGCGACCCTCCACGCAGGCCACCTTCAGGCCTAGCTGGCCGGCGCGAATGGCAGCGTTGTAG‑CCCC‑CCGGACCGGCGCCGATCACGATCACGTCATAGCTTTCCATCATCCTGCTCCTCGGTTGTCCCGCCACGGCCCCCTCAGCGTAGGCGACGCCGGCGCAAATAGAGGAAACGCCGCGTAGAGGGACCGAAAGCGATTGTATT > NC_008463/5692171‑5692463 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |