Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 1,660,913 | 0 | G | . | 42.1% | inf / inf | 465 | coding (1169/1368 nt) | PA14_RS07710 | MFS transporter |
Reads supporting (aligned to +/- strand): ref base G (146/123); new base . (96/100); total (242/223) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.61e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 515 total aligned reads displayed.
CCCAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCCGTAGGCGTAGGCCAT > NC_008463/1660764‑1661061 | cccAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTgg < 1:9873581/150‑1 (MQ=255) ccAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgc > 2:8835341/1‑150 (MQ=255) cAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcg < 2:987499/150‑1 (MQ=255) cAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcg > 1:1183447/1‑150 (MQ=255) gACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcg > 1:2595769/1‑150 (MQ=255) accaccTGGGCGGCGACGCGGACACAGTGGGCGCCGTGGGTGAACACCCGGGACTGGGCGGTGTGCGTCTGGAACCGCCCGGTGTGGAGGGGGCCGAGCATGGAGCCGCTTCTCCCGTCCGCGGAGGCGTTGCCCGAGCCGGTGgcgcgc < 2:6388353/150‑1 (MQ=255) accaccAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgc > 1:9057548/1‑150 (MQ=255) caccaGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcgg < 2:1726567/150‑2 (MQ=255) caccaGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcgg > 2:2441278/1‑149 (MQ=255) caccaGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcgc < 2:7277892/150‑1 (MQ=255) accaGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcgga > 2:9238789/1‑148 (MQ=255) ccaGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGAGTCGCCCGACCGCCGAGGCGACGCCCGAGCCGGTGgcgcgcggag > 1:1889110/1‑147 (MQ=255) caGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcggagg < 2:3935300/150‑5 (MQ=255) aGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcggaggt < 1:2121922/150‑6 (MQ=255) gggCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcggaggtc > 1:5082387/1‑144 (MQ=255) ggcggcGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcggaggtcg < 1:3435839/150‑8 (MQ=255) ggcggcGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGt > 2:485320/1‑150 (MQ=255) ggcggcGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGt < 2:4373016/150‑1 (MQ=255) ggcgACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGAt > 1:5456960/1‑150 (MQ=255) ggcgACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGAt > 1:686695/1‑150 (MQ=255) gACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATa > 2:7950810/1‑150 (MQ=255) gACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATa > 1:8628567/1‑150 (MQ=255) cGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGt < 1:8031718/150‑1 (MQ=255) ccGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGt < 1:8714788/150‑1 (MQ=255) ccGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGt < 2:10963228/150‑1 (MQ=255) cGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTcc < 1:6436112/150‑1 (MQ=255) aaaCAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCgg < 1:10656019/150‑1 (MQ=255) aaCAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGc < 2:1934029/150‑1 (MQ=255) acagctggCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGTGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGAGCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCgg < 2:3644536/144‑1 (MQ=255) aCAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCgg > 2:6985388/1‑150 (MQ=255) cAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGc > 2:941801/1‑150 (MQ=255) agagGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCg < 2:850877/150‑1 (MQ=255) gagGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGt > 2:8162154/1‑150 (MQ=255) gagGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGtat > 1:6571225/1‑150 (MQ=255) ggCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGtata > 1:8876121/1‑150 (MQ=255) gcgcCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgt > 1:6959764/1‑150 (MQ=255) cgcCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgtg < 1:1790118/150‑1 (MQ=255) cgcCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgtg < 1:10032427/150‑1 (MQ=255) ccGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgtg < 2:526935/150‑1 (MQ=255) cGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgtgt < 1:3993492/150‑1 (MQ=255) cGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGAGTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgtgt > 2:9341012/1‑150 (MQ=255) gggTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTaga < 2:8973413/150‑1 (MQ=255) gggTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTaga > 1:10406439/1‑150 (MQ=255) ggTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCa > 2:10799814/1‑150 (MQ=255) tGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCa > 2:1328680/1‑150 (MQ=255) tGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCa > 2:6915294/1‑150 (MQ=255) ccccGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGccc > 1:1348857/1‑150 (MQ=255) ccGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCcac > 1:10266585/1‑150 (MQ=255) ccGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACAt > 2:6639500/1‑150 (MQ=255) cccTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATg > 1:824110/1‑150 (MQ=255) ggCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAAc > 1:440598/1‑150 (MQ=255) ggCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAAc < 2:6136756/150‑1 (MQ=255) gCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGaa < 1:7076195/150‑1 (MQ=255) cGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAgg < 2:2788130/150‑1 (MQ=255) gTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGgaa < 2:9174555/150‑1 (MQ=255) tGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGga < 1:8349258/150‑1 (MQ=255) gCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAAc > 1:3615317/1‑150 (MQ=255) cGGCTGGACCAGCCCGGTGACCATCGGGCCGAGCAGCGAGCCGATTCGCCAGACCGCCGAGGCGAAGCCCGTGCAGGT‑‑TGCGCGCGGAGGTCGGATAGAGTTCCGTCGTATATGTGTAGTGAACCGCCCACATGCCGAACAGGAAGAACt < 2:6274638/150‑1 (MQ=255) aGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGc > 1:9275542/1‑150 (MQ=255) ggACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCa > 1:5550018/1‑150 (MQ=255) ggACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATg < 2:963837/150‑1 (MQ=255) cAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCa < 1:5957357/150‑1 (MQ=255) aGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCat < 2:5080017/150‑2 (MQ=255) gCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGAGAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCa > 2:5962641/1‑150 (MQ=255) cgcGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGACCTGCATGGCCAg > 1:2994561/3‑150 (MQ=255) cccGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACAAGCCGAACAGGAAGAACTGCATGGCCAGGc > 1:7385039/1‑150 (MQ=255) ccGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAgg < 1:314814/150‑1 (MQ=255) ccGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGAGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAgg < 1:7213477/150‑1 (MQ=255) ggTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGcc > 1:7609680/1‑150 (MQ=255) ggTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGa > 2:1152696/1‑150 (MQ=255) gTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTCTAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCg < 2:5150371/150‑1 (MQ=255) tGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAg < 1:9528728/150‑1 (MQ=255) ccAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGc > 1:2020317/1‑150 (MQ=255) aGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGAt > 1:246913/1‑150 (MQ=255) gCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGa > 2:7627262/1‑150 (MQ=255) gggCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATcag > 2:5342430/1‑150 (MQ=255) ccGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATcagcag < 1:3792899/150‑1 (MQ=255) gAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATcagcag > 2:4021472/1‑150 (MQ=255) agcagcGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCagcagc < 1:11053671/150‑1 (MQ=255) aGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGc < 1:4558319/150‑1 (MQ=255) gCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTgc < 1:3088415/150‑1 (MQ=255) gCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTgc < 1:4175837/150‑1 (MQ=255) gCCGATACGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTgc < 1:4961742/150‑1 (MQ=255) ccGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTgcc > 1:9127011/1‑150 (MQ=255) aTTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTgccg < 2:10160755/150‑1 (MQ=255) cGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGAATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGaa < 2:3069039/150‑1 (MQ=255) ccGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAac < 2:10030698/150‑1 (MQ=255) cGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAaca < 2:10396886/150‑1 (MQ=255) cGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACAcc > 2:4633760/1‑150 (MQ=255) cGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACAcc > 2:1522780/1‑150 (MQ=255) ccgAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTc > 2:4194571/1‑150 (MQ=255) cgAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGt > 1:7893736/1‑150 (MQ=255) cgAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCt < 1:4248620/150‑1 (MQ=255) aGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCGACATGCCGAACAGGAAGAACTGCATGGCCTGGCCGAAGCCGTTCAGCAGCGCCGGGCTGCCGCCGACCACCGCGGTCTgg > 2:5768092/1‑150 (MQ=255) aaGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcg > 2:4554226/1‑150 (MQ=255) cccGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcgtaggc > 2:3381052/1‑150 (MQ=255) aGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcgtaggcgt < 1:6325622/150‑1 (MQ=255) aGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcgtaggcgtag > 2:8568518/1‑150 (MQ=255) ccGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcgtaggcgtag > 1:2814613/1‑150 (MQ=255) cGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcgtaggcgtagg < 1:5229206/150‑1 (MQ=255) | CCCAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCCGTAGGCGTAGGCCAT > NC_008463/1660764‑1661061 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |