Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_008463 | 1,660,914 | 0 | C | . | 41.9% | inf / inf | 466 | coding (1168/1368 nt) | PA14_RS07710 | MFS transporter |
Reads supporting (aligned to +/- strand): ref base C (146/124); new base . (96/99); total (242/224) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.47e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 514 total aligned reads displayed.
CCAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCCGTAGGCGTAGGCCATCG > NC_008463/1660765‑1661063 | ccAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgc > 2:8835341/1‑150 (MQ=255) cAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcg < 2:987499/150‑1 (MQ=255) cAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcg > 1:1183447/1‑150 (MQ=255) gACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcg > 1:2595769/1‑150 (MQ=255) accaccTGGGCGGCGACGCGGACACAGTGGGCGCCGTGGGTGAACACCCGGGACTGGGCGGTGTGCGTCTGGAACCGCCCGGTGTGGAGGGGGCCGAGCATGGAGCCGCTTCTCCCGTCCGCGGAGGCGTTGCCCGAGCCGGTGgcgcgc < 2:6388353/150‑1 (MQ=255) accaccAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgc > 1:9057548/1‑150 (MQ=255) ccaccaGGGCGGCGACGCCGAAACAGAGGGTGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcg < 2:104204/150‑1 (MQ=255) accaGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcgga > 2:9238789/1‑148 (MQ=255) ccaGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGAGTCGCCCGACCGCCGAGGCGACGCCCGAGCCGGTGgcgcgcggag > 1:1889110/1‑147 (MQ=255) caGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcggagg < 2:3793538/150‑5 (MQ=255) aGGGCGGCGACGCCGACACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAg < 2:4694695/150‑1 (MQ=255) aGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcggaggt < 1:2121922/150‑6 (MQ=255) gggCGGCGACGCCGCAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAgg < 1:7660881/150‑1 (MQ=255) gggCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGgcgcgcggaggtc > 1:5083808/1‑144 (MQ=255) ggcggcGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGt < 2:4373016/150‑1 (MQ=255) ggcggcGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGt > 2:487746/1‑150 (MQ=255) gcggcgACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTc < 1:2976152/150‑1 (MQ=255) ggcgACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGAt > 1:5456960/1‑150 (MQ=255) ggcgACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGAt > 1:686695/1‑150 (MQ=255) gcgACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGa < 2:3454974/150‑1 (MQ=255) gACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATa > 2:7950810/1‑150 (MQ=255) cGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGt < 1:8031718/150‑1 (MQ=255) gAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCg > 1:1680304/1‑150 (MQ=255) aaaCAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCgg < 1:10656019/150‑1 (MQ=255) aCAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCgg > 2:6985388/1‑150 (MQ=255) aCAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCgg > 2:1235328/1‑150 (MQ=255) cAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGc > 2:941801/1‑150 (MQ=255) agagGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCg < 2:850877/150‑1 (MQ=255) gagGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGt > 2:8162154/1‑150 (MQ=255) gagGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGtat < 1:9934906/150‑1 (MQ=255) agGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGtata > 1:7086687/1‑150 (MQ=255) gcgcCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgt > 1:6959764/1‑150 (MQ=255) cgcCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgtg < 1:10032427/150‑1 (MQ=255) cgcCGAGGGTGAACACCCCGCCCTGGCCGGCGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgtg < 2:1405738/150‑1 (MQ=255) gcCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgtgt < 1:6572946/150‑1 (MQ=255) ccGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgtg < 2:526935/150‑1 (MQ=255) cGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgtgt < 1:3993492/150‑1 (MQ=255) cGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGAGTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGgtgt > 2:9341012/1‑150 (MQ=255) gggTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTaga > 2:2450574/1‑150 (MQ=255) gggTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTaga < 1:7393196/150‑1 (MQ=255) gggTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTaga > 1:10406439/1‑150 (MQ=255) tGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCa > 2:6915294/1‑150 (MQ=255) acacCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGcc < 2:2851846/150‑1 (MQ=255) ccccGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGccc > 1:1348857/1‑150 (MQ=255) cccGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCcaca < 2:3954314/150‑1 (MQ=255) ccGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCcac > 1:10266585/1‑150 (MQ=255) ccGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACAt > 2:6639500/1‑150 (MQ=255) cGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCcaca > 1:8635516/1‑150 (MQ=255) cGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATg < 2:10313408/150‑1 (MQ=255) cccTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATg > 2:5964016/1‑150 (MQ=255) cccTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATg > 1:824110/1‑150 (MQ=255) tGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCg > 1:8481286/1‑150 (MQ=255) ggCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAAc < 2:6136756/150‑1 (MQ=255) ggCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAAc < 2:4022839/150‑1 (MQ=255) gTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGgaa < 2:9174555/150‑1 (MQ=255) gAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGgaaga < 1:3605337/150‑1 (MQ=255) aGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGgaag < 2:1684442/150‑1 (MQ=255) cGGCTGGACCAGCCCGGTGACCATCGGGCCGAGCAGCGAGCCGATTCGCCAGACCGCCGAGGCGAAGCCCGTGCAGGT‑‑TGCGCGCGGAGGTCGGATAGAGTTCCGTCGTATATGTGTAGTGAACCGCCCACATGCCGAACAGGAAGAACt < 2:6274638/150‑1 (MQ=255) gCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACt > 1:8899826/1‑150 (MQ=255) aGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGc > 1:9275542/1‑150 (MQ=255) ggACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATg < 2:963837/150‑1 (MQ=255) gACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATgg > 1:6356629/1‑150 (MQ=255) aCCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATg > 1:6102474/1‑150 (MQ=255) cAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCa > 2:10802562/1‑150 (MQ=255) aGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGCGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAg > 2:728751/1‑150 (MQ=255) aGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCat < 2:5080017/150‑2 (MQ=255) gCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCa < 2:4205243/150‑1 (MQ=255) cccGGTGACCAGCGGGCCGTGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAg < 2:2011953/150‑1 (MQ=255) ccGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAgg < 1:314814/150‑1 (MQ=255) ccGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAgg > 1:5578/1‑150 (MQ=255) ccGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAgg < 1:7213589/150‑1 (MQ=255) cGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCg > 1:8760986/1‑150 (MQ=255) ggTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGAGAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGa > 2:11022458/1‑150 (MQ=255) gTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTCTAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCg < 2:5150371/150‑1 (MQ=255) gACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGGATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGc > 1:4437724/1‑150 (MQ=255) ccAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGc > 1:2020317/1‑150 (MQ=255) aGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGAt > 1:246913/1‑150 (MQ=255) gCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGa > 2:7627262/1‑150 (MQ=255) gggCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATcag > 2:5342430/1‑150 (MQ=255) agcagcGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCagcagc < 1:11053671/150‑1 (MQ=255) agcagcGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCagcagc > 2:10118073/1‑150 (MQ=255) agcGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGcc > 1:5010545/1‑150 (MQ=255) gCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTgc < 1:4175837/150‑1 (MQ=255) gCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTgc < 1:3088415/150‑1 (MQ=255) ccGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTgcc > 1:9127011/1‑150 (MQ=255) cGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGACGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGaa > 2:180243/1‑150 (MQ=255) gACCGCCGAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACcg > 1:3796526/1‑150 (MQ=255) ccgccgAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACcgcg < 2:3097244/150‑1 (MQ=255) ccgAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTc > 1:4611642/1‑150 (MQ=255) cgAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGt > 1:7893736/1‑150 (MQ=255) cgAGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCt < 1:4248702/150‑1 (MQ=255) aGGCGAAGCCCGAGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCGACATGCCGAACAGGAAGAACTGCATGGCCTGGCCGAAGCCGTTCAGCAGCGCCGGGCTGCCGCCGACCACCGCGGTCTgg > 2:5768092/1‑150 (MQ=255) gCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTgg > 1:9684093/1‑150 (MQ=255) aaGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcg > 2:4554226/1‑150 (MQ=255) aGCCGGTG‑‑GCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcgtaggcgtag > 2:8568518/1‑150 (MQ=255) gCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcgtaggcgta > 2:9051607/1‑150 (MQ=255) ccGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcgtaggcgtag < 1:6443273/150‑1 (MQ=255) ccGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcgtaggcgtag > 1:2814613/1‑150 (MQ=255) cGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCcgtaggcgtagg < 1:5229206/150‑1 (MQ=255) cgcgcgcgGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCCGTAGGCGTAGGCCATcg < 1:3428347/150‑1 (MQ=255) | CCAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAACACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCGACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAGAGTTCCGGCGTATAGGTGTAGAGCACCGCCCACATGCCGAACAGGAAGAACTGCATGGCCAGGCCGAAGCCGATCAGCAGCGCCAGGCTGCCGCCGAACACCGCGGTCTGGCCGTAGGCGTAGGCCATCG > NC_008463/1660765‑1661063 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |